CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053158_P001	Maize	cytosol	92.49	89.72
Os11t0160300-01	Rice	cytosol	70.86	73.12
EES16694	Sorghum	cytosol	54.3	59.42
EER97450	Sorghum	cytosol	31.13	43.79
EES05742	Sorghum	cytosol	44.37	32.9
OQU88579	Sorghum	cytosol	41.5	30.57
EES17554	Sorghum	nucleus	42.38	29.72
EER97416	Sorghum	cytosol	42.83	27.6
EES09126	Sorghum	mitochondrion	37.75	24.15

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	EntrezGene:8083085	UniProt:C5Y557
EnsemblPlants:EES09315	ProteinID:EES09315	ProteinID:EES09315.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF110	InterPro:Prot_kinase_dom	SMART:SM00220
EnsemblPlantsGene:SORBI_3005G045800	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A8691E	RefSeq:XP_002450327.1	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:4344454..4347212

Molecular Weight (calculated)

50561.3 Da

IEP (calculated)

6.283

GRAVY (calculated)

-0.217

Length

453 amino acids

Sequence
(BLAST)

001: MAPDPDLAGG EQAEPPDDEV DDPDVDEVDP TGRYFRYKEV VGSGAFKTVY KGFDVVEGIE VAWAKVEING RTMGSPKEMQ RLKTEIQLLR SLQHKHILKL
101: YASWVDNKKR TVNLITELFT SGNLREYRTK HKKVDMKAMR RWAKQILIGL AYLHSQKPPI IHRDLKCDNI FINGNHGKVK IGDFGLAMVM QQRKTQSIQG
201: TLEFMAPEIF GENYNELVDI YSFGMCMLEM VTGECPYSEC QGFVQIYKKI SEGVKPVALS KVKDAEVRSF IESCLASAAD RLPASELLKS PFLLKDDIII
301: NDNKTSKPLQ EPIAFPPNLD LDLEATPIFV SLLPNGTVDN GKGSFSLVLR RGGFVLEGDM NGSNPVKLLL RIPVPNGKCK NIEFAFDLEN DTSVSVATEM
401: VQELELPSWS MPIVAKLVDA FLLKTVRGWR PCVQVGQMIQ AVQNTASANG KCI

Best Arabidopsis Sequence Match ( AT3G18750.5 )
(BLAST)

001: MEGTDDASAL QEPPDPEVLE VDPTFRYIRY KEVIGKGAFK TVYKAFDEVD GIEVAWNQVR IDDVLQSPNC LERLYSEVRL LKSLKHNNII RFYNSWIDDK
101: NKTVNIITEL FTSGSLRHYR KKHRKVNMKA VKNWARQILM GLRYLHGQEP PIIHRDLKCD NIFINGNHGE VKIGDLGLAT VMEQANAKSV IGTPEFMAPE
201: LYDENYNELA DIYSFGMCML EMVTFDYPYC ECKNSAQIYK KVSSGIKPAS LSRVKDPEVK QFIEKCLLPA SERLSAKELL LDPFLQLNGL TMNNPLPLPD
301: IVMPKEGAFG DRCLMSEGPP TTRPSKTLSI DLDEDSNLPI VTFSDNSGSR CIEVRRAKRG NFFVLKGEEN DEQSVSLILR IVDENGRVRN IHFLFYQEGD
401: TASKVSSEMV EQLELTDQNV TFIAELIDIL LVNMIPTWKT DVTVDHLIHS QLNQNSRSHH NEAKPQKQEE TVFHDTCELV SHSCNSDCPR SDEEDKQCVD
501: ATKGEDKSSI QEVEEATEPV SLEEEERLRQ ELEEIEAKYQ EDMKEIATKR EEAIMETKKK LSLMKLK

Arabidopsis Description

WNK6Probable serine/threonine-protein kinase WNK6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.