CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017568_P002	Maize	plastid	91.65	80.23
Os02t0672800-01	Rice	cytosol	74.8	74.67
TraesCS6B01G270400.1	Wheat	cytosol, nucleus, plastid	74.8	74.07
TraesCS6A01G255100.2	Wheat	cytosol, nucleus, plastid	73.65	73.05
TraesCS6D01G236400.1	Wheat	cytosol, nucleus, plastid	73.49	72.89
HORVU6Hr1G065020.2	Barley	cytosol, nucleus, plastid	72.67	71.84
GSMUA_Achr4P29110_001	Banana	cytosol	53.03	56.64
GSMUA_Achr2P11890_001	Banana	cytosol	49.75	55.68
GSMUA_Achr1P03970_001	Banana	cytosol	53.68	53.68
VIT_15s0046g00100.t01	Wine grape	cytosol	50.08	48.34
EER97450	Sorghum	cytosol	25.04	47.52
KRH06435	Soybean	cytosol	51.55	46.74
EES16694	Sorghum	cytosol	31.1	45.89
KRH47870	Soybean	endoplasmic reticulum, plasma membrane	51.72	44.51
EES09315	Sorghum	cytosol	32.9	44.37
Solyc10g009350.2.1	Tomato	cytosol	47.14	43.9
PGSC0003DMT400000351	Potato	plastid	49.1	43.35
Solyc01g096170.2.1	Tomato	plastid	48.77	38.85
EES17554	Sorghum	nucleus	38.79	36.69
OQU88579	Sorghum	cytosol	36.01	35.77
EER97416	Sorghum	cytosol	37.48	32.57
EES09126	Sorghum	mitochondrion	35.84	30.93

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	EntrezGene:8076044	UniProt:C5Y1A5
EnsemblPlants:EES05742	ProteinID:EES05742	ProteinID:EES05742.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF104	InterPro:Prot_kinase_dom	SMART:SM00220	EnsemblPlantsGene:SORBI_3004G284800
SUPFAM:SSF56112	unigene:Sbi.20200	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A85EF2	RefSeq:XP_002452766.1	:

Description

hypothetical protein

Coordinates

chr4:+:62728015..62732816

Molecular Weight (calculated)

67895.2 Da

IEP (calculated)

4.692

GRAVY (calculated)

-0.273

Length

611 amino acids

Sequence
(BLAST)

001: MEVFGSGDEV VDAEYAEVDP TGRYMRYNLI LGRGAFKTVY KAFDEVEGIE VAWNQINIDE VMQCPDNLDR LYTEVHLLKS LKHGNVMKFY YSWIDDQSKT
101: INVITELFTS GSLRHYRQKH PRVNLKAIKN WARQILHGLD YLHSHQPPII HRDLKCDNIF VNGNHGEIKI GDLGLATVMQ TPRARSVIGT PEFMAPELYD
201: ESYDELVDIY SFGMCLLEIF TLEYPYSECT NPAQIFKKVS TGVKPAALAK ISDIQVKQFI EKCLVPASER SSAKELLQDP FLCSDNTHEP AATKFTSPAP
301: NKTVDISLAS LHMDVDTFES SPTNSGKENG CVAPHTPVLE FTRTNKNTEL KLKGEKLDNN SVSLVLRIAD LSGHARNIHF LFYLDSDTAM SVAAEMVEQL
401: ELADCDVTFI ADFIDLLIVN LVPGWRPVNE AAANSYRQPE SELAIASHQN IPKLVPDYAL IDGMMHPKDV NASSTGFLDS VLSATNLGGS QGSEGSVISV
501: QLAESSKSVS DYGAEDYSTT MDCGGVYKEG ISKVDCSHVL DDGSRSIFHI DQASPFLELA SSGSSTSTDN QDVLNGELVL IEAQYKHFVD ELTRMREEAM
601: EGARKKWLPD K

Best Arabidopsis Sequence Match ( AT3G18750.5 )
(BLAST)

001: MEGTDDASAL QEPPDPEVLE VDPTFRYIRY KEVIGKGAFK TVYKAFDEVD GIEVAWNQVR IDDVLQSPNC LERLYSEVRL LKSLKHNNII RFYNSWIDDK
101: NKTVNIITEL FTSGSLRHYR KKHRKVNMKA VKNWARQILM GLRYLHGQEP PIIHRDLKCD NIFINGNHGE VKIGDLGLAT VMEQANAKSV IGTPEFMAPE
201: LYDENYNELA DIYSFGMCML EMVTFDYPYC ECKNSAQIYK KVSSGIKPAS LSRVKDPEVK QFIEKCLLPA SERLSAKELL LDPFLQLNGL TMNNPLPLPD
301: IVMPKEGAFG DRCLMSEGPP TTRPSKTLSI DLDEDSNLPI VTFSDNSGSR CIEVRRAKRG NFFVLKGEEN DEQSVSLILR IVDENGRVRN IHFLFYQEGD
401: TASKVSSEMV EQLELTDQNV TFIAELIDIL LVNMIPTWKT DVTVDHLIHS QLNQNSRSHH NEAKPQKQEE TVFHDTCELV SHSCNSDCPR SDEEDKQCVD
501: ATKGEDKSSI QEVEEATEPV SLEEEERLRQ ELEEIEAKYQ EDMKEIATKR EEAIMETKKK LSLMKLK

Arabidopsis Description

WNK6Probable serine/threonine-protein kinase WNK6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.