Factsheet for TraesCS6D01G236400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G255100.2	Wheat	cytosol, nucleus, plastid	97.89	97.89
HORVU6Hr1G065020.2	Barley	cytosol, nucleus, plastid	94.32	94.01
TraesCS6B01G270400.1	Wheat	cytosol, nucleus, plastid	93.99	93.84
Os02t0672800-01	Rice	cytosol	74.03	74.51
EES05742	Sorghum	cytosol	72.89	73.49
Zm00001d051431_P002	Maize	mitochondrion	60.55	64.42
Zm00001d017568_P002	Maize	plastid	70.45	62.18
GSMUA_Achr4P29110_001	Banana	cytosol	50.0	53.85
GSMUA_Achr2P11890_001	Banana	cytosol	47.08	53.11
GSMUA_Achr1P03970_001	Banana	cytosol	49.68	50.08
TraesCS2D01G197600.1	Wheat	mitochondrion	25.16	48.59
VIT_15s0046g00100.t01	Wine grape	cytosol	49.51	48.18
TraesCS5D01G328200.1	Wheat	cytosol	32.63	45.89
KRH06435	Soybean	cytosol	50.0	45.7
Solyc10g009350.2.1	Tomato	cytosol	46.43	43.6
KRH47870	Soybean	endoplasmic reticulum, plasma membrane	49.68	43.1
PGSC0003DMT400000351	Potato	plastid	48.38	43.06
Solyc01g096170.2.1	Tomato	plastid	48.54	38.98
TraesCS1D01G026200.2	Wheat	nucleus	37.82	37.89
TraesCS5D01G145100.1	Wheat	nucleus	33.44	32.19
TraesCS2D01G203900.2	Wheat	cytosol	36.53	32.01

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR13902	PANTHER:PTHR13902:SF104	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS6D01G236400	EnsemblPlants:TraesCS6D01G236400.1	TIGR:cd13983	:	:	:

Description

No Description!

Coordinates

chr6D:-:332953211..332956660

Molecular Weight (calculated)

68856.6 Da

IEP (calculated)

4.615

GRAVY (calculated)

-0.325

Length

616 amino acids

Sequence
(BLAST)

001: MEVFGDRDEP TDPEYIEVDP TGRYMRYNEV LGRGAVKTVY KAFDEAEGIE VAWNQVSIDE LMQCPDNLER LYAEVHLLKS LKHENVMKFY NYWVDDRKKT
101: INVITELFTS GSLRHYRRKH PRVDLKAIKN WARQILHGLD YLHSHQPPVI HRDLKCDNIF VNGNHGQVKI GDLGLATIML TPKARSVIGT PEFMAPELYD
201: ENYDELVDIY SFGMCMLEMF TLEYPYNECK NAAQIFKKVS KGVKPAALSK IVNAEVKNFI EKCLVPASER LSAKELLQDP FLCPNNANGF ASITVPSSIP
301: KAVRISPESL HMDVDTHESM CASSGEKNVV GSPHNSVLEF TRTNRNTELN LKGEKVDDSS VSLVLRIADL CGQARNIHFL FYLESDTAMS VAAEMVEQLE
401: LADCDVTFIA DFIDLLIVNL VPGRKLANDA AMSPYVESKT CGSEQVTISQ KNPLEMPPDF VLVQSTMHPK DISASPNKYL ESVLSATNLE GPKCSEGSDF
501: SAQLAGSSES PSYDGTGDCG TMYCGGYKEG IHKLDCNHVL GDGSRNISIF HIDEASPPSE LVSGCSSISI TDSQDVLNGE LDLIEVEYKD WFDELARMRE
601: EAMEGGQEKW LQYNDV

Best Arabidopsis Sequence Match ( AT3G18750.5 )
(BLAST)

001: MEGTDDASAL QEPPDPEVLE VDPTFRYIRY KEVIGKGAFK TVYKAFDEVD GIEVAWNQVR IDDVLQSPNC LERLYSEVRL LKSLKHNNII RFYNSWIDDK
101: NKTVNIITEL FTSGSLRHYR KKHRKVNMKA VKNWARQILM GLRYLHGQEP PIIHRDLKCD NIFINGNHGE VKIGDLGLAT VMEQANAKSV IGTPEFMAPE
201: LYDENYNELA DIYSFGMCML EMVTFDYPYC ECKNSAQIYK KVSSGIKPAS LSRVKDPEVK QFIEKCLLPA SERLSAKELL LDPFLQLNGL TMNNPLPLPD
301: IVMPKEGAFG DRCLMSEGPP TTRPSKTLSI DLDEDSNLPI VTFSDNSGSR CIEVRRAKRG NFFVLKGEEN DEQSVSLILR IVDENGRVRN IHFLFYQEGD
401: TASKVSSEMV EQLELTDQNV TFIAELIDIL LVNMIPTWKT DVTVDHLIHS QLNQNSRSHH NEAKPQKQEE TVFHDTCELV SHSCNSDCPR SDEEDKQCVD
501: ATKGEDKSSI QEVEEATEPV SLEEEERLRQ ELEEIEAKYQ EDMKEIATKR EEAIMETKKK LSLMKLK

Arabidopsis Description

WNK6Probable serine/threonine-protein kinase WNK6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.