Factsheet for VIT_15s0046g00100.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0116g00480.t01	Wine grape	cytosol	39.97	60.67
GSMUA_Achr2P11890_001	Banana	cytosol	51.03	59.16
GSMUA_Achr4P29110_001	Banana	cytosol	53.08	58.74
VIT_02s0025g02360.t01	Wine grape	nucleus	56.71	55.4
VIT_19s0090g01690.t01	Wine grape	cytosol	25.75	54.88
KRH06435	Soybean	cytosol	57.03	53.56
GSMUA_Achr1P03970_001	Banana	cytosol	51.66	53.52
Os02t0672800-01	Rice	cytosol	50.55	52.29
KRH47870	Soybean	endoplasmic reticulum, plasma membrane	58.14	51.83
Solyc10g009350.2.1	Tomato	cytosol	53.71	51.83
VIT_17s0053g01080.t01	Wine grape	cytosol, vacuole	15.01	51.63
PGSC0003DMT400000351	Potato	plastid	56.4	51.59
TraesCS6B01G270400.1	Wheat	cytosol, nucleus, plastid	49.13	50.41
EES05742	Sorghum	cytosol	48.34	50.08
HORVU6Hr1G065020.2	Barley	cytosol, nucleus, plastid	48.66	49.84
TraesCS6A01G255100.2	Wheat	cytosol, nucleus, plastid	48.34	49.68
TraesCS6D01G236400.1	Wheat	cytosol, nucleus, plastid	48.18	49.51
VIT_12s0057g00520.t01	Wine grape	cytosol, plastid	25.28	47.48
Solyc01g096170.2.1	Tomato	plastid	56.71	46.81
Zm00001d051431_P002	Maize	mitochondrion	41.39	45.25
VIT_04s0044g00850.t01	Wine grape	cytosol	48.34	43.97
Zm00001d017568_P002	Maize	plastid	47.39	42.98
VIT_06s0004g07920.t01	Wine grape	cytosol	38.07	38.19
VIT_17s0000g09380.t01	Wine grape	nucleus	39.18	37.07
VIT_08s0058g01130.t01	Wine grape	cytosol	35.86	36.26
VIT_05s0020g03380.t01	Wine grape	cytosol	39.18	33.93
VIT_14s0030g01660.t01	Wine grape	cytosol	38.07	33.33
VIT_05s0136g00340.t01	Wine grape	cytosol	13.27	27.1

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100248376	wikigene:100248376	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20
ProteinID:CCB62558	ProteinID:CCB62558.1	UniProt:F6I6G2	EMBL:FN596755	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100248376
wikigene:LOC100248376	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF107
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002109C21	ArrayExpress:VIT_15s0046g00100
EnsemblPlantsGene:VIT_15s0046g00100	EnsemblPlants:VIT_15s0046g00100.t01	RefSeq:XP_002266888	RefSeq:XP_002266888.1	RefSeq:XP_002266888.2	SEG:seg

Description

No Description!

Coordinates

chr15:-:17151522..17154829

Molecular Weight (calculated)

71477.8 Da

IEP (calculated)

5.870

GRAVY (calculated)

-0.525

Length

633 amino acids

Sequence
(BLAST)

001: MNFRHGLVMQ GAEDEDEAAY VEKDPTGRYV RFKEILGKGA FKTVYKAFDE VDGIEIAWNQ VKIDDVLRSP EDLEKLYSEV HLLKSLKHEN IIKFYNSWVD
101: DKKKTVNMIT ELFTSGSLRQ YRKKHKNVDM KAIKNWARQV LRGLVYLHSH NPPIIHRDLK CDNIFVNGNH GEVKIGDLGL AIVMQQPTAR SVIGTPEFMA
201: PELYEEEYNE LVDIYSFGMC MLEMVTFEYP YNECKNPAQI YKKVTSGIKP ASLCKVTDLQ IKEFIVKCLA PASERLPAKE LLKDPFFQSE NPKEPIRVPL
301: QLPSRSPKSI ILSKSGPFSM DIDPDHPQLS SSTSTENNGS PDFPVLEFQR MYKSSEFRLR AKKINDNSIS LTLRTVDSYG PVKNIHFPFS LDTDTVHSVV
401: GEMVEQLELA EHEVAFIADF IDYVIMRLLP GWKPPRDDPL GGARSPNAEP PVLGNGNNHD CTISHGDGNS SPNLANAEDQ DSLASAGLVT LTVDASKKND
501: KTVGFGDYNI GGNYKGSNGG HASEQESRDP YHEDYKLQRN NSSIEEFTPM NKFQKSTVLS FDDLSGLSNV RSLTCSCSSL SLADIDQDPG LKQELDAIDL
601: QYQHWFQELS RMRVEALEAT KKRWMTKKKL AVQ

Best Arabidopsis Sequence Match ( AT3G18750.5 )
(BLAST)

001: MEGTDDASAL QEPPDPEVLE VDPTFRYIRY KEVIGKGAFK TVYKAFDEVD GIEVAWNQVR IDDVLQSPNC LERLYSEVRL LKSLKHNNII RFYNSWIDDK
101: NKTVNIITEL FTSGSLRHYR KKHRKVNMKA VKNWARQILM GLRYLHGQEP PIIHRDLKCD NIFINGNHGE VKIGDLGLAT VMEQANAKSV IGTPEFMAPE
201: LYDENYNELA DIYSFGMCML EMVTFDYPYC ECKNSAQIYK KVSSGIKPAS LSRVKDPEVK QFIEKCLLPA SERLSAKELL LDPFLQLNGL TMNNPLPLPD
301: IVMPKEGAFG DRCLMSEGPP TTRPSKTLSI DLDEDSNLPI VTFSDNSGSR CIEVRRAKRG NFFVLKGEEN DEQSVSLILR IVDENGRVRN IHFLFYQEGD
401: TASKVSSEMV EQLELTDQNV TFIAELIDIL LVNMIPTWKT DVTVDHLIHS QLNQNSRSHH NEAKPQKQEE TVFHDTCELV SHSCNSDCPR SDEEDKQCVD
501: ATKGEDKSSI QEVEEATEPV SLEEEERLRQ ELEEIEAKYQ EDMKEIATKR EEAIMETKKK LSLMKLK

Arabidopsis Description

WNK6Probable serine/threonine-protein kinase WNK6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.