Factsheet for VIT_04s0044g00850.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82329	Canola	cytosol	50.0	67.7
CDY65280	Canola	cytosol	55.17	67.37
CDY18540	Canola	cytosol	55.03	67.19
AT3G18750.3	Thale cress	cytosol	54.6	67.02
CDX75984	Canola	cytosol	53.59	66.73
Bra001718.1-P	Field mustard	cytosol	48.56	63.65
Bra037565.1-P	Field mustard	cytosol	55.03	62.58
AT1G49160.5	Thale cress	cytosol	52.73	60.76
KRH53867	Soybean	cytosol	56.18	59.6
KRH59541	Soybean	cytosol	32.47	58.4
VIT_19s0090g01690.t01	Wine grape	cytosol	24.43	57.24
VIT_10s0116g00480.t01	Wine grape	cytosol	32.61	54.44
KRH64083	Soybean	cytosol	37.64	50.78
VIT_12s0057g00520.t01	Wine grape	cytosol, plastid	23.85	49.26
VIT_15s0046g00100.t01	Wine grape	cytosol	43.97	48.34
VIT_17s0053g01080.t01	Wine grape	cytosol, vacuole	12.21	46.2
VIT_02s0025g02360.t01	Wine grape	nucleus	42.96	46.14
VIT_06s0004g07920.t01	Wine grape	cytosol	34.91	38.51
VIT_17s0000g09380.t01	Wine grape	nucleus	35.2	36.62
VIT_08s0058g01130.t01	Wine grape	cytosol	31.47	34.98
VIT_05s0020g03380.t01	Wine grape	cytosol	36.64	34.88
VIT_14s0030g01660.t01	Wine grape	cytosol	35.34	34.02
VIT_05s0136g00340.t01	Wine grape	cytosol	9.05	20.32

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100259251	wikigene:100259251	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20
ProteinID:CCB60436	ProteinID:CCB60436.1	ncoils:Coil	UniProt:F6I0H0	EMBL:FN596506	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100259251	wikigene:LOC100259251	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR13902
PANTHER:PTHR13902:SF109	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000210A580
ArrayExpress:VIT_04s0044g00850	EnsemblPlantsGene:VIT_04s0044g00850	EnsemblPlants:VIT_04s0044g00850.t01	unigene:Vvi.14604	RefSeq:XP_002275565	RefSeq:XP_002275565.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4:+:21993993..21997860

Molecular Weight (calculated)

77916.7 Da

IEP (calculated)

4.877

GRAVY (calculated)

-0.372

Length

696 amino acids

Sequence
(BLAST)

001: MGLVGVESGE EGIGHSEPPD PDVLEIDPTS RYIRFKDILG KGAFKTVYKA FDQVDGIEVA WNQVRIDEVL QSPDELERLY SEVHLLKSLK HKNIIKFYNS
101: WIDDGNKTVN IITELFTSGS LRQYRKKHKK VDMKAVKGWA RQILMGLNYL HNHNPPIIHR DLKCDNIFIN GNQGEVKIGD LGLATVMQQA NARTVIGTPE
201: FMAPELYDEN YNELADIYSF GMCMLEMVTL EYPYSECRNS AQIYKKVSNG IKPAALSKIK DLEVKMFIEK CLVPASQRLS AKKLLNDPFF QVDGLTKNHP
301: LQLPDIVIPK TGAFGDRCLL SEGPTSLQNR PLAMDLDAVD DDELPIITSM DNSVDGGPYS LCMEVQRAKG GNFFLLKGEG NDENSISLIL RIADQNGRLR
401: NIHFMFYLDS DTALSVSSEM VEQLELADQN VTFIAELIDL LLIMLIPTWK PCVPIDHLVA LNRMQTSNGH HEDLQCPEHG ECLVGSFEGV CETDNLLSPH
501: VYPNSTSFEG YIETMQENPK HLSLDEIKTH ADLGLPSSAT VEDHGSDMSY VSATSNEGSD KKYSHNAYLS AESGCMDYNE YGSKRGVRQS LSAVQTSSCN
601: LDKGKATDIG SNGAVTSSDY PIDSSLSDQV ESENMILELE MIELQYHEAV KEIAKRRQEA IRETKKRLSQ KRIESSGFLF LIKLAWEADS LSKARR

Best Arabidopsis Sequence Match ( AT3G18750.5 )
(BLAST)

001: MEGTDDASAL QEPPDPEVLE VDPTFRYIRY KEVIGKGAFK TVYKAFDEVD GIEVAWNQVR IDDVLQSPNC LERLYSEVRL LKSLKHNNII RFYNSWIDDK
101: NKTVNIITEL FTSGSLRHYR KKHRKVNMKA VKNWARQILM GLRYLHGQEP PIIHRDLKCD NIFINGNHGE VKIGDLGLAT VMEQANAKSV IGTPEFMAPE
201: LYDENYNELA DIYSFGMCML EMVTFDYPYC ECKNSAQIYK KVSSGIKPAS LSRVKDPEVK QFIEKCLLPA SERLSAKELL LDPFLQLNGL TMNNPLPLPD
301: IVMPKEGAFG DRCLMSEGPP TTRPSKTLSI DLDEDSNLPI VTFSDNSGSR CIEVRRAKRG NFFVLKGEEN DEQSVSLILR IVDENGRVRN IHFLFYQEGD
401: TASKVSSEMV EQLELTDQNV TFIAELIDIL LVNMIPTWKT DVTVDHLIHS QLNQNSRSHH NEAKPQKQEE TVFHDTCELV SHSCNSDCPR SDEEDKQCVD
501: ATKGEDKSSI QEVEEATEPV SLEEEERLRQ ELEEIEAKYQ EDMKEIATKR EEAIMETKKK LSLMKLK

Arabidopsis Description

WNK6Probable serine/threonine-protein kinase WNK6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.