CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82329	Canola	cytosol	91.06	99.03
CDY18540	Canola	cytosol	91.06	89.3
CDY65280	Canola	cytosol	90.88	89.12
AT3G18750.3	Thale cress	cytosol	87.66	86.42
CDY36754	Canola	cytosol	30.05	55.08
CDY11988	Canola	cytosol	30.05	54.9
CDY17333	Canola	cytosol, nucleus, plastid	30.05	54.55
CDY20759	Canola	cytosol	30.05	54.19
CDY45665	Canola	cytosol, nucleus, plastid	29.7	53.72
CDY06573	Canola	cytosol	29.7	53.72
VIT_04s0044g00850.t01	Wine grape	cytosol	66.73	53.59
KRH59541	Soybean	cytosol	36.14	52.2
CDY72128	Canola	cytosol	38.82	51.91
KRH53867	Soybean	cytosol	60.82	51.83
CDY72029	Canola	cytosol	37.57	48.39
CDX67520	Canola	nucleus	46.33	48.23
CDY13374	Canola	nucleus	46.69	47.11
CDY21817	Canola	cytosol, nucleus, plastid	42.75	46.32
CDX77897	Canola	cytosol, nucleus, plastid	42.58	46.03
CDX86190	Canola	cytosol	39.0	45.89
CDY59818	Canola	cytosol	39.18	45.53
CDX80684	Canola	cytosol	38.64	45.47
CDY00011	Canola	cytosol	39.36	42.97
KRH64083	Soybean	cytosol	39.0	42.25
CDX92942	Canola	nucleus	38.46	40.11
CDY24308	Canola	nucleus	38.1	39.66
CDY10641	Canola	nucleus	39.18	39.46
CDX88670	Canola	cytosol	37.21	39.25
CDY69580	Canola	cytosol	36.85	38.94
CDY38324	Canola	nucleus	39.0	38.93
CDX78018	Canola	nucleus	37.92	38.41
CDX73710	Canola	nucleus	37.92	38.34
CDY43861	Canola	cytosol	37.75	38.16
CDY32991	Canola	cytosol	37.57	37.43
CDY29791	Canola	cytosol	19.86	37.37
CDY32707	Canola	cytosol	36.31	36.25
CDX74162	Canola	cytosol	40.97	34.59
CDY40685	Canola	cytosol	40.79	34.44
CDY41908	Canola	cytosol	40.43	34.09
CDY50765	Canola	cytosol	40.79	33.63
CDY02813	Canola	nucleus	36.31	25.0
CDY21369	Canola	nucleus	10.38	10.53

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	GO:A0A078CIU6	EnsemblPlants:CDX75984
ProteinID:CDX75984	ProteinID:CDX75984.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00124029001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR13902
PANTHER:PTHR13902:SF109	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF05B2
SEG:seg	:	:	:	:	:

Description

BnaC03g40670D

Coordinates

chrLK031805:-:2402601..2405378

Molecular Weight (calculated)

64229.1 Da

IEP (calculated)

4.721

GRAVY (calculated)

-0.548

Length

559 amino acids

Sequence
(BLAST)

001: MDGSEDGAVL QEPPDPEVLE VDPTNRYIRY KEVIGKGAFK TVYKAFDEVD GIEVAWNQVR IDDVLQSPNS LERLYSEVRL LKSLKHSNII RFYNSWIDDK
101: NKTVNIITEL FTSGSLRNYR KKHRKVNMKA VKCWARQILM GLRYLHTQVP PIIHRDLKCD NIFINGNHGE VKIGDLGLAT VMEQANAKSV IAGTPEFMAP
201: ELYDEDYTEL ADIYSFGMCM LEMVTFEYPY CECKNSAQIY KKVSSGIKPA SLSRVQDPEV KQFIETCLLP ASERLSAKEL LLDPFLQVNG LTMNNPLPLP
301: DIVMPKEGAF GERCLISMSI DLDEDNNLPI VTFSDNSGSR CIEVRRAKRG NFFVLKGEEN DEHSVSLILR IVDENGEVRN IHFLFYQEGD TASKVSSEMV
401: EQLELTDQNV TFIAELIDIL LVNMIPTWKT DVTVDHLIHS QLNQSSRSHQ NAHRQEESAA FHDACESVRH SWNSDCRRSE EEYKQCVDGV KGEDGSRNQE
501: EAEEAIDPVR LEEEERLREE LEEIEAKYRE EMKEIGRRRE EAIMETRKRL SQKKTEQVE

Best Arabidopsis Sequence Match ( AT3G18750.5 )
(BLAST)

001: MEGTDDASAL QEPPDPEVLE VDPTFRYIRY KEVIGKGAFK TVYKAFDEVD GIEVAWNQVR IDDVLQSPNC LERLYSEVRL LKSLKHNNII RFYNSWIDDK
101: NKTVNIITEL FTSGSLRHYR KKHRKVNMKA VKNWARQILM GLRYLHGQEP PIIHRDLKCD NIFINGNHGE VKIGDLGLAT VMEQANAKSV IGTPEFMAPE
201: LYDENYNELA DIYSFGMCML EMVTFDYPYC ECKNSAQIYK KVSSGIKPAS LSRVKDPEVK QFIEKCLLPA SERLSAKELL LDPFLQLNGL TMNNPLPLPD
301: IVMPKEGAFG DRCLMSEGPP TTRPSKTLSI DLDEDSNLPI VTFSDNSGSR CIEVRRAKRG NFFVLKGEEN DEQSVSLILR IVDENGRVRN IHFLFYQEGD
401: TASKVSSEMV EQLELTDQNV TFIAELIDIL LVNMIPTWKT DVTVDHLIHS QLNQNSRSHH NEAKPQKQEE TVFHDTCELV SHSCNSDCPR SDEEDKQCVD
501: ATKGEDKSSI QEVEEATEPV SLEEEERLRQ ELEEIEAKYQ EDMKEIATKR EEAIMETKKK LSLMKLK

Arabidopsis Description

WNK6Probable serine/threonine-protein kinase WNK6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.