CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10641	Canola	nucleus	94.82	95.68
CDX92942	Canola	nucleus	84.11	87.87
CDY24308	Canola	nucleus	83.04	86.59
AT3G22420.3	Thale cress	golgi, plasma membrane	85.36	71.77
CDY72128	Canola	cytosol	47.86	64.11
CDX86190	Canola	cytosol	49.82	58.74
CDX80684	Canola	cytosol	49.64	58.53
CDY72029	Canola	cytosol	45.18	58.29
CDY59818	Canola	cytosol	48.21	56.13
CDY36754	Canola	cytosol	29.46	54.1
CDY11988	Canola	cytosol	29.46	53.92
CDY20759	Canola	cytosol	29.64	53.55
CDY06573	Canola	cytosol	29.29	53.07
CDY00011	Canola	cytosol	48.39	52.93
CDY17333	Canola	cytosol, nucleus, plastid	28.75	52.27
CDY45665	Canola	cytosol, nucleus, plastid	28.75	52.1
CDY41908	Canola	cytosol	57.86	48.87
CDX74162	Canola	cytosol	57.68	48.79
CDY40685	Canola	cytosol	57.68	48.79
CDY50765	Canola	cytosol	57.68	47.64
CDY21817	Canola	cytosol, nucleus, plastid	40.36	43.8
CDX77897	Canola	cytosol, nucleus, plastid	40.36	43.71
CDX82329	Canola	cytosol	38.04	41.44
CDX88670	Canola	cytosol	38.93	41.13
CDY69580	Canola	cytosol	38.75	41.02
CDX78018	Canola	nucleus	40.36	40.94
CDX73710	Canola	nucleus	40.36	40.87
CDX75984	Canola	cytosol	38.93	39.0
CDY43861	Canola	cytosol	38.39	38.88
CDY32991	Canola	cytosol	38.93	38.86
CDY65280	Canola	cytosol	39.46	38.77
CDY18540	Canola	cytosol	39.29	38.6
CDY32707	Canola	cytosol	38.21	38.21
CDX67520	Canola	nucleus	36.61	38.17
CDY13374	Canola	nucleus	36.25	36.64
CDY29791	Canola	cytosol	18.57	35.02
CDY02813	Canola	nucleus	38.57	26.6
CDY21369	Canola	nucleus	10.36	10.53

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.4	Gene3D:3.30.200.20	GO:A0A078HLT9	UniProt:A0A078HLT9	EnsemblPlants:CDY38324
ProteinID:CDY38324	ProteinID:CDY38324.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00065714001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR13902
PANTHER:PTHR13902:SF105	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE8864
SEG:seg	:	:	:	:	:

Description

BnaC05g30170DBnaC05g30170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLT9]

Coordinates

chrLK032421:-:263186..265701

Molecular Weight (calculated)

64546.6 Da

IEP (calculated)

4.839

GRAVY (calculated)

-0.562

Length

560 amino acids

Sequence
(BLAST)

001: MNGEESFVED CSEFVEVDPS GRYGRYEEVL GKGASKTVYR AFDEYEGIEV AWNQVKLRNF TRNPEQLDKF FREIHLLKTL NHQNIMRFYT SWVDTDNLSI
101: NFVTELFTSG TLRQYRLRHR RVNIKAVKQW CKQILKGLLY LHSRSPPIIH RDLKCDNIFI NGNQGEVKIG DLGLAAILRK SHAVRCVGTP EFMAPEVYDE
201: EYNELVDVYA FGMCVLEMVT FDYPYSECTH PAQIYKKVTS GKKPEAFYLV KDPEVRAFVE KCLATVTSRL TALELLQDPF LQDDVNGFDL RPIDYYNGYD
301: ETGVFLRQPL MDPDQLEPQI CEINLFAQDD EEDSDHVDIS IKGKRNGNDG IFLRFRISDA EGRIRNIYFP FETAIDTAWS VVEEMVSELD ITNQDVAKIA
401: EMIDAEISAL VPDWKIDDHN VTESESNVNN NNGGFCGNCA SNGYIQETVS SNSELSGEKS HQHHHHQFDD RSCSSVHGRI HYADIWGLRD SRSDDGEEEH
501: GTKKVRGEWW SENEIRRELR WLKARHKIQL DHQRLKAPTE SDSPPLLYRA ISLPVDAVDI

Best Arabidopsis Sequence Match ( AT3G22420.4 )
(BLAST)

001: MVLVKCDWVR SLTSCLLIIV TRWALKEKNT CFLIYSSPFK HLIFSSSTIS TNSKHLSLFL SHTQNCRRRR VMNGEESFVE DCSVFVEIDP SGRYGRYDEI
101: LGKGASKTVY RAFDEYEGIE VAWNQVKLRN FTRNPEELEK FFREIHLLKT LNHQNIMKFY TSWVDTNNLS INFVTELFTS GTLRQYRLRH RRVNIRAVKQ
201: WCKQILKGLL YLHSRSPPII HRDLKCDNIF INGNQGEVKI GDLGLAAILR KSHAVRCVGT PEFMAPEVYD EEYNELVDVY AFGMCVLEMV TFDYPYSECT
301: HPAQIYKKVT SGKKPEAFYL VKDPEVREFV EKCLANVTCR LTALELLQDP FLQDDNMDGF VMRPIDYYNG YDETGVFLRH PLIDDPLYHD QFESSQICEI
401: DLFANDDEDH VDISIKGKRN GDDGIFLRLR ISDAEGRIRN IYFPFETAID TAWSVAVEMV SELDITNQDV AKIAEMIDAE IAALVPDWKN DTESSQNVNN
501: NKNNNTAGFC GECASNGYIQ ETVSSGEKSH HNHHEFDSSE DKSCSSVHGR FADMWGLRES YSDDGEKQSS RKVRSGRWSE NEMRRELRWL KARHKIQLMK
601: MRGQTICETP IEISLTPGTS VSLPLLYRAI SLPVDAVDM

Arabidopsis Description

WNK2With no lysine (K) kinase 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMD0]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.