CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50765	Canola	cytosol	97.89	95.72
CDY40685	Canola	cytosol	90.35	90.48
CDX74162	Canola	cytosol	90.2	90.33
AT3G04910.1	Thale cress	cytosol	89.44	84.71
CDY72128	Canola	cytosol	49.62	78.71
CDX86190	Canola	cytosol	55.35	77.26
CDX80684	Canola	cytosol	55.2	77.05
CDY72029	Canola	cytosol	49.17	75.12
CDY59818	Canola	cytosol	53.7	74.01
CDY00011	Canola	cytosol	53.85	69.73
GSMUA_Achr6P29650_001	Banana	cytosol	43.29	63.92
CDY24308	Canola	nucleus	48.42	59.78
KRH34065	Soybean	cytosol	66.06	59.35
GSMUA_Achr9P25350_001	Banana	cytosol	48.42	59.33
CDX92942	Canola	nucleus	47.96	59.33
KRG92737	Soybean	cytosol	65.76	59.08
VIT_14s0030g01660.t01	Wine grape	cytosol	64.25	58.92
CDY38324	Canola	nucleus	48.87	57.86
CDY36754	Canola	cytosol	26.55	57.7
CDY10641	Canola	nucleus	48.27	57.66
KRG96945	Soybean	cytosol	59.28	57.62
CDY11988	Canola	cytosol	26.55	57.52
GSMUA_Achr8P15460_001	Banana	cytosol	52.94	57.45
CDY20759	Canola	cytosol	26.7	57.1
CDY06573	Canola	cytosol	26.55	56.96
KRH68708	Soybean	cytosol	62.44	56.4
CDY17333	Canola	cytosol, nucleus, plastid	26.09	56.17
CDY45665	Canola	cytosol, nucleus, plastid	26.09	55.99
PGSC0003DMT400057980	Potato	cytosol	62.59	55.48
Solyc01g097840.2.1	Tomato	cytosol	62.44	55.35
PGSC0003DMT400077354	Potato	cytosol	58.97	53.49
Solyc09g076000.2.1	Tomato	nucleus	58.07	52.67
EER97416	Sorghum	cytosol	53.54	50.5
Os07t0572800-01	Rice	cytosol	53.24	50.14
TraesCS2D01G203900.2	Wheat	cytosol	52.64	49.64
TraesCS2A01G195900.2	Wheat	cytosol	52.49	49.64
Zm00001d021875_P002	Maize	cytosol	52.64	49.5
TraesCS2B01G223600.1	Wheat	cytosol	52.49	49.5
Zm00001d006644_P002	Maize	cytosol	52.34	49.36
HORVU2Hr1G037990.5	Barley	cytosol	50.08	48.68
CDY21817	Canola	cytosol, nucleus, plastid	37.86	48.64
CDX77897	Canola	cytosol, nucleus, plastid	37.86	48.55
GSMUA_Achr9P11110_001	Banana	cytosol, nucleus, peroxisome	55.51	48.04
CDX88670	Canola	cytosol	35.75	44.72
CDY69580	Canola	cytosol	35.29	44.23
CDX82329	Canola	cytosol	33.33	43.0
CDY43861	Canola	cytosol	35.29	42.31
CDY32991	Canola	cytosol	35.29	41.71
CDY32707	Canola	cytosol	34.84	41.25
CDX78018	Canola	nucleus	34.09	40.94
CDX73710	Canola	nucleus	34.09	40.87
CDY65280	Canola	cytosol	34.99	40.7
CDY18540	Canola	cytosol	34.84	40.53
CDX75984	Canola	cytosol	34.09	40.43
CDX67520	Canola	nucleus	31.98	39.48
CDY13374	Canola	nucleus	31.98	38.27
CDY29791	Canola	cytosol	16.59	37.04
CDY02813	Canola	nucleus	34.99	28.57
CDY21369	Canola	nucleus	9.05	10.89

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	GO:A0A078HYV9	UniProt:A0A078HYV9
EnsemblPlants:CDY41908	ProteinID:CDY41908	ProteinID:CDY41908.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00073888001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR13902	PANTHER:PTHR13902:SF105	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EF4137	SEG:seg	:	:	:	:

Description

BnaC05g46960DBnaC05g46960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYV9]

Coordinates

chrLK032510:+:92699..95557

Molecular Weight (calculated)

76148.5 Da

IEP (calculated)

4.830

GRAVY (calculated)

-0.575

Length

663 amino acids

Sequence
(BLAST)

001: MNNLVSYLEP DYSEFVEVDP TGRYGRYNEV LGKGASKTVY RAFDEYEGIE VAWNQVKLYD FLQSPEDLER LYCEIHLLKT LKHKNIMKFY TSWVDTSNRN
101: INFVTELFTS GTLRQYRLRH KRVNIRAVKH WCRQILRGLH YLHNHDPPII HRDLKCDNIF VNGNQGEVKI GDLGLAAILR KSHAAHCVGT PEFMAPEVYE
201: EAYNELVDIY SFGMCILEMV TFDYPYSECT HPAQIYKKVM SGKKPDALYM VKDPEVKYFI EKCLATVSLR VSARELLDDP FFRIDNGEFD LRSVDMDYPV
301: APPLVRQPHH HLADYYNRQY SNGYHEYQKR WAYNTEETHG IELFESRQEE DKSSGNVDIS IKGKRRDDGG LFLRFRITDK EGRVRNIYFP FDIETDTALS
401: VATEMVAELD MDDHGVTKIA NMIDGEISRL VPSWRPGPEF EESLAAAAAA ANANICSNCV SNRTSMGSVM DFLRTNPGAN VAECCRNGCG ETHGRFEEIT
501: IRETEVRLRE IWKLQQQQES RELSSIDSGQ NHSEEEEEEE EVYEDPEITF SCEASSTLNH LTGSGSFSFL PSLYCDEVEK TEDQVQQEFR WLKAKCQMDI
601: REMQDEQLKS MWSETGEEGL KDGFSGSVSG LVRGGDEDKV FGGRLVPKCL KRTTSLPVDA IEA

Best Arabidopsis Sequence Match ( AT3G04910.1 )
(BLAST)

001: MNNLSYLEPD YSEFVEVDPT GRYGRYNEVL GKGASKTVYR AFDEYEGIEV AWNQVKLYDF LQSPEDLERL YCEIHLLKTL KHKNIMKFYT SWVDTANRNI
101: NFVTELFTSG TLRQYRLRHK RVNIRAMKHW CRQILRGLHY LHSHDPPVIH RDLKCDNIFV NGNQGEVKIG DLGLAAILRK SHAAHCVGTP EFMAPEVYEE
201: AYNELVDIYS FGMCILEMVT FDYPYSECTH PAQIYKKVMS GKKPDALYKV KDPEVKCFIE KCLATVSLRV SARELLDDPF LRIDDGEFDL RSVDMEDSVG
301: PLYRQPHHLP DYYNYPSNSS SLNRQYSNGN YPSNSSSLNR QYSNGYNSHH EYQNGWAYNP AETEETHGIE LFESRNNDDQ EEEKKSGNVD ITIKGKRRDD
401: GGLFLRLRIA DKEGRVRNIY FPFDIETDTA LSVATEMVAE LDMDDHGVTK IANMIDGEIS SLVPSWRPGP EFEECLAAAA AANAASICNN CVSNRTSMGS
501: VMDFLRTNPG ANVIQCCRNG CGETHGRFEE ITIRETEVRL RELWKLQQQQ ESRELSSIDS GHNHSEEEEE EEVLYEDPEN MFSCEAGNEI NHISGSGSFS
601: FMPSKYCDEP SEKTENQVQQ ELRWLKAKCQ IELRDIQDEQ LKTRWPESGE EVEISPKDGF LGSVSGLGRE EDTVKEMFGE RLVPKCLKRT TSLPVDAIDS

Arabidopsis Description

WNK1Serine/threonine-protein kinase WNK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.