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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002897.1-P Field mustard cytosol 98.38 98.7
CDY45665 Canola cytosol, nucleus, plastid 98.38 98.06
CDY06573 Canola cytosol 87.99 87.7
CDY11988 Canola cytosol 87.01 87.58
CDY36754 Canola cytosol 86.69 87.54
CDY20759 Canola cytosol 87.34 86.77
AT5G55560.1 Thale cress cytosol 84.09 82.48
VIT_19s0090g01690.t01 Wine grape cytosol 74.03 76.77
GSMUA_Achr2P06570_001 Banana cytosol 48.38 73.4
Solyc07g065250.2.1 Tomato cytosol 71.75 72.7
PGSC0003DMT400057113 Potato cytosol 71.75 72.22
GSMUA_Achr1P22760_001 Banana cytosol 56.49 69.05
GSMUA_Achr1P12650_001 Banana cytosol 59.09 67.91
Os07t0584100-01 Rice cytosol 62.99 59.33
TraesCS2D01G197600.1 Wheat mitochondrion 61.04 58.93
EER97450 Sorghum cytosol 61.36 58.7
TraesCS2A01G190200.1 Wheat mitochondrion 61.04 58.02
Zm00001d021948_P001 Maize cytosol 61.04 58.02
TraesCS2B01G216800.1 Wheat mitochondrion 60.39 57.76
TraesCS3A01G240400.1 Wheat cytosol 24.35 54.35
HORVU2Hr1G036210.2 Barley plastid 61.36 53.85
CDY29791 Canola cytosol 51.62 53.54
TraesCS3B01G460100.1 Wheat cytosol 26.95 51.23
TraesCS3A01G193000.1 Wheat cytosol 26.95 51.23
TraesCS5A01G315400.1 Wheat cytosol 26.62 50.62
CDY72128 Canola cytosol 54.87 40.43
CDY72029 Canola cytosol 50.32 35.71
CDX86190 Canola cytosol 54.87 35.58
CDX80684 Canola cytosol 54.55 35.37
CDY59818 Canola cytosol 54.87 35.14
CDY21817 Canola cytosol, nucleus, plastid 56.49 33.72
CDX77897 Canola cytosol, nucleus, plastid 56.17 33.46
CDY00011 Canola cytosol 54.87 33.01
CDX82329 Canola cytosol 53.57 32.1
CDX75984 Canola cytosol 54.55 30.05
CDY65280 Canola cytosol 55.19 29.82
CDX92942 Canola nucleus 51.62 29.66
CDY18540 Canola cytosol 54.87 29.65
CDX67520 Canola nucleus 51.62 29.61
CDY24308 Canola nucleus 51.62 29.61
CDY69580 Canola cytosol 50.65 29.49
CDX88670 Canola cytosol 50.65 29.43
CDY10641 Canola nucleus 52.27 29.01
CDY38324 Canola nucleus 52.27 28.75
CDY13374 Canola nucleus 51.62 28.7
CDX78018 Canola nucleus 51.3 28.62
CDX73710 Canola nucleus 51.3 28.57
CDY43861 Canola cytosol 50.32 28.03
CDY32991 Canola cytosol 50.32 27.63
CDY32707 Canola cytosol 50.0 27.5
CDY41908 Canola cytosol 56.17 26.09
CDX74162 Canola cytosol 55.84 25.98
CDY40685 Canola cytosol 55.84 25.98
CDY50765 Canola cytosol 56.17 25.52
CDY02813 Canola nucleus 50.65 19.21
CDY21369 Canola nucleus 15.91 8.89
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.2.4Gene3D:3.30.200.20GO:A0A078FYA4UniProt:A0A078FYA4EnsemblPlants:CDY17333
ProteinID:CDY17333ProteinID:CDY17333.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00095431001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654PFscan:PS50011PANTHER:PTHR13902PANTHER:PTHR13902:SF111
InterPro:Prot_kinase_domSUPFAM:SSF56112UniParc:UPI0004EDF791SEG:seg::
Description
BnaA10g09670DBnaA10g09670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYA4]
Coordinates
chrLK032072:-:354195..355538
Molecular Weight (calculated)
35004.4 Da
IEP (calculated)
4.897
GRAVY (calculated)
-0.453
Length
308 amino acids
Sequence
(BLAST)
001: MSFEPLDNDD SEPFVESDPT GRYGRYDELL GSGAVKKVYR AFDQEEGIEV AWNQVKLRCF SDDTAMLERL YSEVRLLKSL ENSNIIALYK VWRDEGSNTL
101: NFITEICTSG NLREYRKKHR HVSMRALKKW SRQILKGLDY LHTRKPCIIH RDLNCSNVFV NGNIGQVKIG DLGLAATVGE NHVAHSILGT PEFMAPELYE
201: ERYTEIVDIY SYGMCVLELV SLEIPYSECD NVAKIYRRVS SGVRPEALNK VKDVEAKAFI EKCLGKPKAR PSAAELLRDP FFDGIVDDDD DDEQVENNEN
301: CGTGRIVS
Best Arabidopsis Sequence Match ( AT5G55560.1 )
(BLAST)
001: MMTCASSDDN ESEKDKDSES FVEVDPTGRY GRYGELLGSG AVKKVYRAFD QEEGIEVAWN QVKLRCFSDD PAMTERLYSE VRLLKNLKNS NIITLYKVWR
101: DERNNTLNFI TEICTSGNLR EYRKKHRHVS MRALKKWSKQ ILKGLDYLHT HDPCIIHRDL NCSNIFVNGN IGQVKIGDLG LAAIVGKNHL AHSILGTPEF
201: MAPELYEENY TEMVDIYSYG MCVLELVSLE IPYSECDSVA KIYKRVSKGL KPEALNKVND PEAKAFIEKC IAQPRARPSA AELLCDPFFD GILDDDDEDG
301: ENNDNNGAGR IVVS
Arabidopsis Description
WNK11Probable serine/threonine-protein kinase WNK11 [Source:UniProtKB/Swiss-Prot;Acc:Q6ICW6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.