Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024518.1-P | Field mustard | nucleus | 50.45 | 58.4 |
| CDY36754 | Canola | cytosol | 9.07 | 16.39 |
| CDY11988 | Canola | cytosol | 9.07 | 16.34 |
| CDY45665 | Canola | cytosol, nucleus, plastid | 9.07 | 16.18 |
| CDY17333 | Canola | cytosol, nucleus, plastid | 8.89 | 15.91 |
| CDY06573 | Canola | cytosol | 8.71 | 15.53 |
| CDY20759 | Canola | cytosol | 8.71 | 15.48 |
| CDY72128 | Canola | cytosol | 10.71 | 14.11 |
| CDX80684 | Canola | cytosol | 11.07 | 12.84 |
| CDX86190 | Canola | cytosol | 11.07 | 12.84 |
| CDY59818 | Canola | cytosol | 10.71 | 12.27 |
| CDY00011 | Canola | cytosol | 10.71 | 11.52 |
| CDX82329 | Canola | cytosol | 10.53 | 11.28 |
| CDX92942 | Canola | nucleus | 10.71 | 11.01 |
| CDY24308 | Canola | nucleus | 10.71 | 10.99 |
| CDY21817 | Canola | cytosol, nucleus, plastid | 9.98 | 10.66 |
| CDX77897 | Canola | cytosol, nucleus, plastid | 9.98 | 10.64 |
| CDY10641 | Canola | nucleus | 10.71 | 10.63 |
| CDY72029 | Canola | cytosol | 8.35 | 10.6 |
| CDX75984 | Canola | cytosol | 10.53 | 10.38 |
| CDY38324 | Canola | nucleus | 10.53 | 10.36 |
| CDX67520 | Canola | nucleus | 9.8 | 10.06 |
| CDY18540 | Canola | cytosol | 10.34 | 10.0 |
| CDY65280 | Canola | cytosol | 10.34 | 10.0 |
| CDX78018 | Canola | nucleus | 9.8 | 9.78 |
| CDX73710 | Canola | nucleus | 9.8 | 9.76 |
| CDY29791 | Canola | cytosol | 5.26 | 9.76 |
| CDY13374 | Canola | nucleus | 9.8 | 9.75 |
| CDY69580 | Canola | cytosol | 9.26 | 9.64 |
| CDX88670 | Canola | cytosol | 9.26 | 9.62 |
| CDY32707 | Canola | cytosol | 9.44 | 9.29 |
| CDY43861 | Canola | cytosol | 9.26 | 9.22 |
| CDY40685 | Canola | cytosol | 11.07 | 9.21 |
| CDX74162 | Canola | cytosol | 11.07 | 9.21 |
| CDY41908 | Canola | cytosol | 10.89 | 9.05 |
| CDY32991 | Canola | cytosol | 9.07 | 8.91 |
| CDY50765 | Canola | cytosol | 10.89 | 8.85 |
| CDY02813 | Canola | nucleus | 9.26 | 6.28 |
Protein Annotations
| EnsemblPlants:CDY21369 | EnsemblPlantsGene:GSBRNA2T00015737001 | ProteinID:CDY21369 | ProteinID:CDY21369.1 | SEG:seg | UniParc:UPI0004EE9DD4 |
| UniProt:A0A078G7I3 | MapMan:35.2 | : | : | : | : |
Description
BnaA09g30580DBnaA09g30580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7I3]
Coordinates
chrLK032120:-:275206..282848
Molecular Weight (calculated)
62667.4 Da
IEP (calculated)
7.970
GRAVY (calculated)
-1.036
Length
551 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSQGNLCED VHPSGSLEPL MRLTAENDGN HNVLDELSYN PDIPTTNWTY NSLSSMPNKN VTVPLSSGIY GQQLQPSSLG TEQNLNNDNI CTQSCRAIVT
101: TTQQQYHGLY NINSTSGTCP QQCLPYMYPS SSTNPQCNIS HRPRLQFPSS SSRYGPSSSF NSLFLNNLTP RRPFFNSSIH QRRRPQRQSN QCLERGESSS
201: VSQRQLQPSF LGTEENLNNY HLPTQNCHAI QQQHQQGRNF HVQPNNQGLY NQMMMDSAPR RSEALTGVNQ QLNERTTSLE EPNIPTMQQY QQQFSRRYDP
301: NSTFGEYSGT QGLIDQRSSS FKSPCLKKQT HIRPFTNPSI LLQQLQPSFL GTEENLNNYH LPTQNFHAVQ QQHQQGRNFH VQPNNQGLYN QMMMDSGPRR
401: SEALTGVNQQ LNARTTSLEE PNIPTMESGG HINGQSSTHH LATDTLRRRR PQSNECEFGE SSSSAKRMRI ISPGENNESF ADSLLNLREE RTTNSVLSPT
501: YRTSGLTVNP HLRRSDDIRS PYGPYDERYE ADRQYLDPHM RKFENSVRRG N
101: TTQQQYHGLY NINSTSGTCP QQCLPYMYPS SSTNPQCNIS HRPRLQFPSS SSRYGPSSSF NSLFLNNLTP RRPFFNSSIH QRRRPQRQSN QCLERGESSS
201: VSQRQLQPSF LGTEENLNNY HLPTQNCHAI QQQHQQGRNF HVQPNNQGLY NQMMMDSAPR RSEALTGVNQ QLNERTTSLE EPNIPTMQQY QQQFSRRYDP
301: NSTFGEYSGT QGLIDQRSSS FKSPCLKKQT HIRPFTNPSI LLQQLQPSFL GTEENLNNYH LPTQNFHAVQ QQHQQGRNFH VQPNNQGLYN QMMMDSGPRR
401: SEALTGVNQQ LNARTTSLEE PNIPTMESGG HINGQSSTHH LATDTLRRRR PQSNECEFGE SSSSAKRMRI ISPGENNESF ADSLLNLREE RTTNSVLSPT
501: YRTSGLTVNP HLRRSDDIRS PYGPYDERYE ADRQYLDPHM RKFENSVRRG N
001: MDLVDDMLPF TPSWFPPSPE PFPSIMELLQ DPMTAEIENF DGIFSSPAIS EAIPSTNTQP SVFPCPESST IPQISPDMQQ QEPLDDSHGY LQQSDQQDLL
101: NPNMLNCYQE PDVSTIQQQQ LNLPGPLEQS DLQRLLNPNM MYSEPDFSTS QQQQLLCNSA GYLQESDHQG LLNPNMLNSF YEPDVSAMLQ QPPPLYDSHG
201: YLQQSDQQDL MNQNMMNSFQ GANVSTTQQQ QLLCNSHGHV QGNLSNIQSD QQYLSNQNAT DLFQEPNNST MIDIGQQIEE GNNGYAHQPL IDPFELPNHH
301: QEQFPSVPIS QNYPSYPVYQ HGPVGSHFNM YGQQPPPLVL TNREEEHLPP RNVTDLASTY HLQNQISTIP PQSQMTSSST RIYPLQNQIS MIPPQSQVPS
401: SSTRTYPIAN QISMIPHQPQ TRSRSTRTYL RQNRTSTNAP QPQIPSSSTR NGNVQELVSQ PLPSFRCPQV DTSTQISQCT NSFTTPIQSS NLGRRQRSYQ
501: NHFDHGESSS ASQRKRMILP KMNVDSTVAN PVEPRLVNEL YSPRYESLGI AIDPFLRKFH FQR
101: NPNMLNCYQE PDVSTIQQQQ LNLPGPLEQS DLQRLLNPNM MYSEPDFSTS QQQQLLCNSA GYLQESDHQG LLNPNMLNSF YEPDVSAMLQ QPPPLYDSHG
201: YLQQSDQQDL MNQNMMNSFQ GANVSTTQQQ QLLCNSHGHV QGNLSNIQSD QQYLSNQNAT DLFQEPNNST MIDIGQQIEE GNNGYAHQPL IDPFELPNHH
301: QEQFPSVPIS QNYPSYPVYQ HGPVGSHFNM YGQQPPPLVL TNREEEHLPP RNVTDLASTY HLQNQISTIP PQSQMTSSST RIYPLQNQIS MIPPQSQVPS
401: SSTRTYPIAN QISMIPHQPQ TRSRSTRTYL RQNRTSTNAP QPQIPSSSTR NGNVQELVSQ PLPSFRCPQV DTSTQISQCT NSFTTPIQSS NLGRRQRSYQ
501: NHFDHGESSS ASQRKRMILP KMNVDSTVAN PVEPRLVNEL YSPRYESLGI AIDPFLRKFH FQR
Arabidopsis Description
unknown protein; Has 647 Blast hits to 524 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 100; Fungi - 44; Plants - 83; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). [Source:TAIR;Acc:AT1G28630]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.