CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75984	Canola	cytosol	99.03	91.06
Bra001718.1-P	Field mustard	cytosol	90.86	87.95
CDY18540	Canola	cytosol	92.02	82.98
CDY65280	Canola	cytosol	91.83	82.81
AT3G18750.3	Thale cress	cytosol	88.72	80.42
CDY36754	Canola	cytosol	32.1	54.1
CDY11988	Canola	cytosol	32.1	53.92
CDY17333	Canola	cytosol, nucleus, plastid	32.1	53.57
CDY20759	Canola	cytosol	32.1	53.23
CDY45665	Canola	cytosol, nucleus, plastid	31.71	52.75
CDY06573	Canola	cytosol	31.71	52.75
CDY72128	Canola	cytosol	42.02	51.67
KRH59541	Soybean	cytosol	38.13	50.65
VIT_04s0044g00850.t01	Wine grape	cytosol	67.7	50.0
KRH53867	Soybean	cytosol	62.65	49.09
CDY72029	Canola	cytosol	40.66	48.16
CDX67520	Canola	nucleus	48.64	46.55
CDX86190	Canola	cytosol	42.22	45.68
CDY59818	Canola	cytosol	42.41	45.32
CDY13374	Canola	nucleus	48.83	45.31
CDX80684	Canola	cytosol	41.83	45.26
CDY21817	Canola	cytosol, nucleus, plastid	44.75	44.57
CDX77897	Canola	cytosol, nucleus, plastid	44.75	44.49
CDY00011	Canola	cytosol	42.61	42.77
CDX92942	Canola	nucleus	41.05	39.37
KRH64083	Soybean	cytosol	39.49	39.34
CDY24308	Canola	nucleus	40.66	38.92
CDY10641	Canola	nucleus	41.63	38.56
CDY38324	Canola	nucleus	41.44	38.04
CDX88670	Canola	cytosol	39.11	37.92
CDY69580	Canola	cytosol	38.72	37.62
CDX78018	Canola	nucleus	40.27	37.5
CDX73710	Canola	nucleus	40.27	37.43
CDY29791	Canola	cytosol	21.6	37.37
CDY43861	Canola	cytosol	39.69	36.89
CDY32991	Canola	cytosol	39.49	36.19
CDY32707	Canola	cytosol	38.33	35.18
CDX74162	Canola	cytosol	43.19	33.53
CDY40685	Canola	cytosol	43.0	33.38
CDY41908	Canola	cytosol	43.0	33.33
CDY50765	Canola	cytosol	43.39	32.89
CDY02813	Canola	nucleus	38.33	24.26
CDY21369	Canola	nucleus	11.28	10.53

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	GO:A0A078D261	EnsemblPlants:CDX82329
ProteinID:CDX82329	ProteinID:CDX82329.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00137446001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF109
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EEB963	SEG:seg

Description

BnaA03g34920D

Coordinates

chrLK031828:+:630070..632590

Molecular Weight (calculated)

58395.3 Da

IEP (calculated)

4.781

GRAVY (calculated)

-0.414

Length

514 amino acids

Sequence
(BLAST)

001: MDGSEDGAVL QEPPDPEVLE VDPTNRYIRY KEVIGKGAFK TVYKAFDEVD GIEVAWNQVR IDDVLQSPNS LERLYSEVRL LKSLKHSNII RFYNSWIDDK
101: NKTVNIITEL FTSGSLRNYR KKHRKVNMKA VKCWARQILM GLRYLHTQVP PIIHRDLKCD NIFINGNHGE VKIGDLGLAT VMEQANAKSV IAGTPEFMAP
201: ELYDEDYTVL ADIYSFGMCM LEMVTFEYPY CECKNSAQIY KKVSSGIKPA SLSRVQDPEV KQFIETCLLP ASERLSAKEL LLDPFLQVNG LTMNNPLPLP
301: DIVMPKEGAF GERCLISMSI DLDEDNNLPI VTFSDNSGSR CIEVRRAKRG NFFVLKGEEN DEHSVSLILR IVDENGRVRN IHFLFYQEGD TASKVSSEMV
401: EQLELTDQNV TFIAELIDIL LVNMIPTWKT DVTVDHLIHS QLNQSSRSHQ NAHRQEESAA FHDACESVRH SWNSDCRRSE EEYKQCVDGV KGEDGSGNQE
501: EAEEAVDPKT EQVV

Best Arabidopsis Sequence Match ( AT3G18750.5 )
(BLAST)

001: MEGTDDASAL QEPPDPEVLE VDPTFRYIRY KEVIGKGAFK TVYKAFDEVD GIEVAWNQVR IDDVLQSPNC LERLYSEVRL LKSLKHNNII RFYNSWIDDK
101: NKTVNIITEL FTSGSLRHYR KKHRKVNMKA VKNWARQILM GLRYLHGQEP PIIHRDLKCD NIFINGNHGE VKIGDLGLAT VMEQANAKSV IGTPEFMAPE
201: LYDENYNELA DIYSFGMCML EMVTFDYPYC ECKNSAQIYK KVSSGIKPAS LSRVKDPEVK QFIEKCLLPA SERLSAKELL LDPFLQLNGL TMNNPLPLPD
301: IVMPKEGAFG DRCLMSEGPP TTRPSKTLSI DLDEDSNLPI VTFSDNSGSR CIEVRRAKRG NFFVLKGEEN DEQSVSLILR IVDENGRVRN IHFLFYQEGD
401: TASKVSSEMV EQLELTDQNV TFIAELIDIL LVNMIPTWKT DVTVDHLIHS QLNQNSRSHH NEAKPQKQEE TVFHDTCELV SHSCNSDCPR SDEEDKQCVD
501: ATKGEDKSSI QEVEEATEPV SLEEEERLRQ ELEEIEAKYQ EDMKEIATKR EEAIMETKKK LSLMKLK

Arabidopsis Description

WNK6Probable serine/threonine-protein kinase WNK6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.