CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX67520
CDX71966
CDX98037
CDY13374
CDY16036
CDY19421
CDY21070
CDY26596
CDY66539

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41990.1	CDX71966	AT1G12840.1	16427632
AT5G41990.1	CDX98037	AT1G12840.1	16427632
AT5G41990.1	CDY16036	AT1G12840.1	16427632
AT5G41990.1	CDY19421	AT1G12840.1	16427632
AT5G41990.1	CDY21070	AT1G12840.1	16427632
AT5G41990.1	CDY26596	AT1G12840.1	16427632
AT5G41990.1	CDY66539	AT1G12840.1	16427632
AT5G41990.1	CDX71966	AT1G12840.1	21798944
AT5G41990.1	CDX98037	AT1G12840.1	21798944
AT5G41990.1	CDY16036	AT1G12840.1	21798944
AT5G41990.1	CDY19421	AT1G12840.1	21798944
AT5G41990.1	CDY21070	AT1G12840.1	21798944
AT5G41990.1	CDY26596	AT1G12840.1	21798944
AT5G41990.1	CDY66539	AT1G12840.1	21798944
AT5G41990.1	CDX67520	AT5G41990.1	16427632
AT5G41990.1	CDY13374	AT5G41990.1	16427632

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67520	Canola	nucleus	94.58	97.58
AT5G41990.1	Thale cress	cytosol	85.02	83.66
CDY17333	Canola	cytosol, nucleus, plastid	28.7	51.62
CDY20759	Canola	cytosol	28.7	51.29
CDY36754	Canola	cytosol	28.16	51.15
CDY45665	Canola	cytosol, nucleus, plastid	28.52	51.13
CDY11988	Canola	cytosol	28.16	50.98
CDY06573	Canola	cytosol	28.34	50.81
CDY72128	Canola	cytosol	37.73	50.0
CDX82329	Canola	cytosol	45.31	48.83
PGSC0003DMT400031918	Potato	cytosol	50.9	47.88
Solyc08g082980.2.1	Tomato	cytosol	50.18	47.44
CDY65280	Canola	cytosol	48.38	47.02
CDY18540	Canola	cytosol	48.38	47.02
CDX75984	Canola	cytosol	47.11	46.69
KRH17593	Soybean	cytosol	51.99	46.6
CDY72029	Canola	cytosol	36.46	46.54
KRG90091	Soybean	cytosol	51.44	46.12
VIT_17s0053g01080.t01	Wine grape	cytosol, vacuole	15.16	45.65
CDX80684	Canola	cytosol	38.45	44.84
CDX86190	Canola	cytosol	38.09	44.42
CDY59818	Canola	cytosol	38.45	44.28
CDY21817	Canola	cytosol, nucleus, plastid	40.43	43.41
CDX77897	Canola	cytosol, nucleus, plastid	40.25	43.13
CDY00011	Canola	cytosol	38.45	41.6
CDY69580	Canola	cytosol	37.73	39.51
CDX88670	Canola	cytosol	37.73	39.43
CDY43861	Canola	cytosol	38.27	38.34
CDX92942	Canola	nucleus	36.82	38.06
CDY32991	Canola	cytosol	38.45	37.97
CDX78018	Canola	nucleus	37.73	37.86
CDX73710	Canola	nucleus	37.73	37.79
CDY24308	Canola	nucleus	36.46	37.62
CDY10641	Canola	nucleus	36.82	36.76
CDY29791	Canola	cytosol	19.49	36.36
CDY38324	Canola	nucleus	36.64	36.25
CDY32707	Canola	cytosol	36.46	36.07
CDY40685	Canola	cytosol	39.71	33.23
CDX74162	Canola	cytosol	39.71	33.23
CDY41908	Canola	cytosol	38.27	31.98
CDY50765	Canola	cytosol	38.81	31.71
CDY02813	Canola	nucleus	36.46	24.88
CDY21369	Canola	nucleus	9.75	9.8

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	GO:A0A078FK73	UniProt:A0A078FK73
EnsemblPlants:CDY13374	ProteinID:CDY13374	ProteinID:CDY13374.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00071402001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF107	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE39CB	SEG:seg	:	:	:

Description

BnaC06g13830DBnaC06g13830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FK73]

Coordinates

chrLK032034:+:746397..749089

Molecular Weight (calculated)

62582.9 Da

IEP (calculated)

5.162

GRAVY (calculated)

-0.529

Length

554 amino acids

Sequence
(BLAST)

001: MAFGSSGTSE EEADFADKDP TGRYIRYHDV LGRGAFKTVY KAFDEVDGIE VAWNLVSIED VMQMPGQLER LYSEVHLLKA LKHENIIKLF NSWVDEKNKT
101: INMITELFTS GSLRLYRKKH RKVDPKAIKN WARQILKGLT YLHSQKPPVI HRDLKCDNIF VNGNTGEIKI GDLGLATVLQ QPTARSVIGT PEFMAPELYE
201: EEYTELVDIY SFGMCMLEMV TCEYPYNECR NQAQIYKKVT SGIKPQSLSR VDDPLVRQFI EKCLLPASSR PKALELSMDP FLARDGSKDS ASLLASTSTA
301: SKPPHPEHLP MDVDHHHNEN KSVSVSSSRK SNNEESYPWC QTIELQRFAE DKEFRLRGER SDDATASMLL RIGDSSGKGR IVHFAFYLNS DTATAIAEEM
401: VEELHLTSQE VIVIADMIND LIMQLHSERS SSSHPNQTSP HLAVPEDHEA ANQLTANSKD EESMKSGIST DYYLPFSSNG SAGQEAESMS SFLDSCSMMS
501: TLYISDNEYP EDLKTELNMI ESQYNQSVQD LLKLKEDAVE NAKRKWIVKK QKGL

Best Arabidopsis Sequence Match ( AT5G41990.1 )
(BLAST)

001: MASGSGFLGQ ISSMEEADFA EKDPSGRYIR YDDVLGRGAF KTVYKAFDEV DGIEVAWNLV SIEDVMQMPG QLERLYSEVH LLKALKHENI IKLFYSWVDE
101: KNKTINMITE LFTSGSLRVY RKKHRKVDPK AIKNWARQIL KGLNYLHSQN PPVIHRDLKC DNIFVNGNTG EVKIGDLGLA TVLQQPTARS VIGTPEFMAP
201: ELYEEEYNEL VDIYSFGMCM LEMVTCEYPY NECRNQAQIY KKVTSNIKPQ SLGKVDDPQV RQFIEKCLLP ASSRPTALEL SKDPFLARDG GKDSALLASS
301: STSSKYVRPP QLEHLPMDVD HNENKSVSSN EDYPWSQTIE LQRIAENKEF RLRGERSDDV TASMVLRIAD PSGKCRIVHF AFYLESDTAT AIAEEMVEEL
401: HLTSQEVVVI ADMIDDFIMQ LLSDRTSSHH NQNSPRLTHE DHEAANQQTV NSKDEEAAGQ SMKSDISADY YFPYSANDGN AAMEAGRDAE SMSSYLDSCS
501: MMSTIYNLSI SDNDYPEDLK TELNLIESQF NQSFQDLLKL KEDAIENAKR KWITKKQKAV NIS

Arabidopsis Description

WNK8Serine/threonine-protein kinase WNK8 [Source:UniProtKB/Swiss-Prot;Acc:Q944Q0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.