Factsheet for VIT_06s0004g07920.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029915.1-P	Field mustard	cytosol	8.72	74.32
KRH72819	Soybean	cytosol	64.82	67.27
CDY69580	Canola	cytosol	55.94	66.73
CDX88670	Canola	cytosol	55.47	66.04
KRH17174	Soybean	cytosol	63.39	65.9
Bra006771.1-P	Field mustard	cytosol	55.15	65.78
CDY43861	Canola	cytosol	56.89	64.92
PGSC0003DMT400078269	Potato	cytosol	64.98	64.57
CDY32991	Canola	cytosol	57.37	64.53
AT5G58350.1	Thale cress	cytosol	58.16	64.27
KRG98155	Soybean	cytosol	62.12	64.26
Solyc06g082470.2.1	Tomato	cytosol	64.34	63.84
Bra002658.1-P	Field mustard	cytosol	56.74	63.81
Bra020372.1-P	Field mustard	cytosol	55.94	63.04
CDY32707	Canola	cytosol	55.47	62.5
VIT_08s0058g01130.t01	Wine grape	cytosol	61.65	62.14
KRH30115	Soybean	cytosol	43.74	60.66
GSMUA_Achr11P...	Banana	cytosol	56.74	58.5
GSMUA_Achr4P18630_001	Banana	cytosol	54.52	54.09
GSMUA_Achr5P29640_001	Banana	nucleus	52.61	53.9
VIT_19s0090g01690.t01	Wine grape	cytosol	25.04	53.2
TraesCS5A01G147500.1	Wheat	cytosol	52.61	52.12
HORVU5Hr1G046590.1	Barley	nucleus	52.46	52.04
TraesCS5B01G146100.1	Wheat	cytosol	52.3	51.56
TraesCS5D01G145100.1	Wheat	nucleus	52.14	51.41
Os12t0114100-01	Rice	nucleus	48.18	49.11
Os11t0114600-01	Rice	mitochondrion	48.18	48.87
Zm00001d052343_P001	Maize	cytosol	51.03	48.57
VIT_12s0057g00520.t01	Wine grape	cytosol, plastid	25.52	47.77
VIT_10s0116g00480.t01	Wine grape	cytosol	31.54	47.72
EES09126	Sorghum	mitochondrion	52.3	46.61
CDY02813	Canola	nucleus	56.26	43.72
VIT_17s0053g01080.t01	Wine grape	cytosol, vacuole	12.52	42.93
GSMUA_Achr11P...	Banana	cytosol	15.21	38.87
VIT_15s0046g00100.t01	Wine grape	cytosol	38.19	38.07
VIT_17s0000g09380.t01	Wine grape	nucleus	39.78	37.52
VIT_05s0020g03380.t01	Wine grape	cytosol	41.84	36.11
VIT_14s0030g01660.t01	Wine grape	cytosol	41.2	35.96
VIT_02s0025g02360.t01	Wine grape	nucleus	36.45	35.49
VIT_04s0044g00850.t01	Wine grape	cytosol	38.51	34.91
GSMUA_Achr7P22120_001	Banana	nucleus	54.2	26.55
VIT_05s0136g00340.t01	Wine grape	cytosol	5.71	11.61

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100255269	wikigene:100255269	MapMan:18.4.2.4	Gene3D:3.30.200.20	ProteinID:CBI15829
ProteinID:CBI15829.3	UniProt:D7SJK3	EMBL:FN594951	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100255269	wikigene:LOC100255269	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR13902
PANTHER:PTHR13902:SF49	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC58748
UniParc:UPI0001983714	ArrayExpress:VIT_06s0004g07920	EnsemblPlantsGene:VIT_06s0004g07920	EnsemblPlants:VIT_06s0004g07920.t01	unigene:Vvi.7777	RefSeq:XP_002268300
RefSeq:XP_002268300.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6:-:8665166..8669149

Molecular Weight (calculated)

71620.7 Da

IEP (calculated)

7.272

GRAVY (calculated)

-0.619

Length

631 amino acids

Sequence
(BLAST)

001: MYRTKLGELT NEGKDESGYA ETDPTGRYGR LDEVLGKGAM KTVYKAIDEV LGMEVAWNQV KLNEVLRSPD ELQRLYSEVH LLSALNHDSI IQFYTSWIDV
101: ERKTFNFITE FFTSGTLREY RKKYKRVDIR AIKCWARQIL RGLVYLHGHD PPVIHRDLKC DNIFVNGHLG EVKIGDLGLA AILRGSQSAH SVIGTPEFMA
201: PELYEENYNE LVDVYSFGMC VLEMLTSEYP YSECSNPAQI YKKVTSGKLP GAFYRIQDLE AQRFIGKCLV TASKRLPAKE LLLDPFLASD EAKRLPKPKL
301: GSQKPFLNDI RIEKLRLSDD RVRTNMTITG TLNPDDDTIF LKVQTADKDG SARNIYFPFD IVTDTPIDVA MEMVKELEIT DWEPFEIADM IDGEISALVP
401: QWKKWDMPQQ HHYAFDYQEE DEGHNHPFRS FSSCSSSQAS FPCLSTSHRL DTMAQGGDWL KDDLFDDTSS ESSAHSGKYS NLNYFSGNEH CSETSTLRRE
501: QHPGAKTQKS TRFCPEENSS TRKALPGKSY KQGKVLQESQ RAPGSKDKFA METIRLTRNR SLVDVRSQLL HRTLVEEVHK RRLSKTVGAV ENIGFQAPCN
601: VSGKVSQKPT GAHSTRTTRD GKGQGSQRRR A

Best Arabidopsis Sequence Match ( AT5G58350.1 )
(BLAST)

001: MNMNQVAEYV ETDPTGRYGR FAEILGRGAM KTVYKAIDEK LGIEVAWSQV KLKEVLRSSV DLQRLYSEVH LLSTLNHKSI IRFYTSWIDV HNHTLNFITE
101: LFTSGTLRQY KNKYLRIDIR AIKSWARQIL EGLVYLHEHD PPVIHRDLKC DNIFVNGHLG QVKIGDLGLA RMLRDCHSAH SIIGTPEFMA PELYEENYNE
201: LIDVYSFGMC FLEMITSEFP YSECNHPAQI YKKVVGGKLP GAFYRVGDIE AQRFIGKCLV SASKRVSAKE LLQDPFLASD ESWMVYTSGA GNPKPFLNEN
301: EMDTLKLEDD ELRTEMSIAG KLGAEDNKID LEVQIAYDNG LANNVFFPFD IMNDTSIDVA KEMVKELEII DWEPVEIAKM IDGAISSLVS DWKYEEDDET
401: PHDHHRHRTD SFHSSSSHAS SSQASLSNYM ARGLQDWVQD DLHDETYSQS SSHSGSYSNL NYIAVDEYSS QSPVMSRTHN MTRFCPEESS HLQSGQANAY
501: AASSSTNRSL ASDNRTLTRN RSLVDVQRQL LHRSPGEEAR KRRLFKTVGD VETVGFQSPY AVSRKPPSSR R

Arabidopsis Description

WNK4Probable serine/threonine-protein kinase WNK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.