Factsheet for GSMUA_Achr5P29640_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P18630_001	Banana	cytosol	71.75	69.5
GSMUA_Achr11P...	Banana	cytosol	62.99	63.4
Bra029915.1-P	Field mustard	cytosol	7.31	60.81
GSMUA_Achr2P06570_001	Banana	cytosol	19.16	58.13
CDY69580	Canola	cytosol	46.59	54.25
Bra006771.1-P	Field mustard	cytosol	46.43	54.06
CDX88670	Canola	cytosol	46.43	53.96
AT3G51630.1	Thale cress	cytosol	47.89	53.73
CDY43861	Canola	cytosol	47.4	52.8
KRH72819	Soybean	cytosol	52.11	52.8
TraesCS5A01G147500.1	Wheat	cytosol	54.55	52.75
PGSC0003DMT400011279	Potato	cytosol	50.97	52.68
HORVU5Hr1G046590.1	Barley	nucleus	54.38	52.67
VIT_06s0004g07920.t01	Wine grape	cytosol	53.9	52.61
CDY32991	Canola	cytosol	47.73	52.41
TraesCS5D01G145100.1	Wheat	nucleus	54.38	52.34
TraesCS5B01G146100.1	Wheat	cytosol	54.06	52.03
CDX73710	Canola	nucleus	46.59	51.9
Bra002658.1-P	Field mustard	cytosol	47.24	51.87
CDX78018	Canola	nucleus	46.43	51.81
Solyc09g018170.2.1	Tomato	cytosol	50.81	51.65
KRH17174	Soybean	cytosol	50.81	51.57
AT5G58350.1	Thale cress	cytosol	47.73	51.49
KRH65445	Soybean	cytosol	50.65	51.15
KRH76107	Soybean	cytosol	50.49	51.07
PGSC0003DMT400078269	Potato	cytosol	52.6	51.02
VIT_08s0058g01130.t01	Wine grape	cytosol	51.79	50.96
GSMUA_Achr1P22760_001	Banana	cytosol	20.78	50.79
Solyc06g082470.2.1	Tomato	cytosol	52.44	50.79
Os12t0114100-01	Rice	nucleus	50.97	50.73
Zm00001d052343_P001	Maize	cytosol	54.55	50.68
KRG98155	Soybean	cytosol	50.16	50.66
Os11t0114600-01	Rice	mitochondrion	51.14	50.64
CDY32707	Canola	cytosol	45.62	50.18
Bra020372.1-P	Field mustard	cytosol	45.29	49.82
KRH00466	Soybean	cytosol	43.02	49.07
GSMUA_Achr11P...	Banana	cytosol	19.64	48.99
GSMUA_Achr1P12650_001	Banana	cytosol	21.27	48.88
KRH30115	Soybean	cytosol	35.88	48.57
EES09126	Sorghum	mitochondrion	54.22	47.18
GSMUA_Achr6P29650_001	Banana	cytosol	34.09	46.77
KRH40760	Soybean	cytosol	46.59	46.44
Bra036787.1-P	Field mustard	nucleus	47.24	41.99
GSMUA_Achr2P11890_001	Banana	cytosol	35.23	39.74
GSMUA_Achr9P25350_001	Banana	cytosol	34.74	39.56
GSMUA_Achr4P29110_001	Banana	cytosol	35.55	38.29
GSMUA_Achr8P15460_001	Banana	cytosol	37.01	37.32
GSMUA_Achr1P03970_001	Banana	cytosol	35.23	35.52
CDY02813	Canola	nucleus	45.29	34.36
GSMUA_Achr6P12140_001	Banana	nucleus	37.66	34.32
GSMUA_Achr10P...	Banana	nucleus	37.18	30.78
GSMUA_Achr7P22120_001	Banana	nucleus	62.34	29.81
GSMUA_Achr9P11110_001	Banana	cytosol, nucleus, peroxisome	36.69	29.5

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.4	Gene3D:3.10.20.90	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr5G29640_001	EnsemblPlants:GSMUA_Achr5P29640_001	EnsemblPlants:GSMUA_Achr5T29640_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0T2T8
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR13902	PANTHER:PTHR13902:SF49	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296FC26	SEG:seg	:

Description

Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr5G29640_001]

Coordinates

chr5:-:29279125..29283718

Molecular Weight (calculated)

69251.5 Da

IEP (calculated)

5.720

GRAVY (calculated)

-0.484

Length

616 amino acids

Sequence
(BLAST)

001: MFEKRRAERA VVENGYVETD PVTGRYGRFD EVLGKGATKT VYRAFDEVNG TEVAWNQAML CDMMRSPEAL ERMYSEVHLL SSLCHESIIK FHSSWIDVEH
101: RTFNFITELF ASGTLRQYRQ RYQQVDIRAV KRWARQILEG LAYLHGHDPP VIHRDLKCDN IFVNGHLGQV KIGDLGLAAT LRGAQCKHSV IGTPEFMAPE
201: LYEEEYNELA DIYSFGMSVL EMLTSEYPYS ECSNPAQIYK KVTSGKLPHA FNCIQDPEAK RFVGRCLQKV PGRSSAKELL LDPFLTFEDP APKNPANDVK
301: NIVSGNHDLD PLQVTYHHDL DPVVRTTDMT ITGKMNTEDD AIYLKVQIAD NEGNASNIYF HFDIVSDTPI DVANEMVKEL DITDREPAEI AEMIAQAISA
401: ASMSGCKEGV LGDGPHVYNY VDDEQEGSSH PFHCLSSPAS SQGSSVFGMS SPRGIFCQQH NHHQADWLGD GLMDDEDMSS IHSTKYSAVN YVSASEQESD
501: GTFHHQLITN SHESTRFCLE EDPAENESIT NQLHRKCSAS AEARGASSVR GGKRPVDSRR LMRNRSMIDV RSQLLHKALV EKLNKRMFNT VGSVENIDRV
601: PGAIRWPSSV YLSRRL

Best Arabidopsis Sequence Match ( AT3G51630.1 )
(BLAST)

001: MYMEISSASD DSIAYVETDP SGRYGRFREV LGKGAMKTVY KAFDQVLGME VAWNQVKLNE VFRSPEPLQR LYSEVHLLKN LNHESIIRYC TSWIDVNRRT
101: FNFITELFTS GTLREYRRKY QKVDIRAIKS WARQILNGLA YLHGHDPPVI HRDLKCDNIF VNGHLGQVKI GDLGLAAILR GSQNAHSVIG TPEFMAPELY
201: EEDYNELVDI YSFGMCVLEM LTGEYPYSEC TNPAQIYKKV TSGKLPDSFH LIQHTEAQRF VGKCLETVSR RLPAKELLAD PFLAATDERD LAPLFRLPQQ
301: LAIQNLAANG TVVEHLPSTT DPTRTTDMSI TGKMNSEDHT IFLQVQILDG DGHMRNIQFP FNILSDTPLE VALEMVKELE ITDWDPLEIA AMIENEISLL
401: VPNWRANDSS IRHESFGHED DEDNGDTEGR TRLFSSASSS HDSPVAVREN NDDSSNDVIP DMDDGNRSSN RLLNSSTYHY SPAIDDDQNQ QQRRRVRLQQ
501: KMRSLVDTRT QVLHRSLMEL INKRRGRGFD PNTNELQPQP SSTDFIRRC

Arabidopsis Description

WNK5Probable serine/threonine-protein kinase WNK5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.