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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 5
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
mitochondrion: 15069638
msms PMID: 15069638 doi
N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu
Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os12t0114100-01 Rice nucleus 95.82 96.28
HORVU5Hr1G046590.1 Barley nucleus 64.31 62.89
TraesCS5A01G147500.1 Wheat cytosol 64.31 62.79
TraesCS5B01G146100.1 Wheat cytosol 64.47 62.66
TraesCS5D01G145100.1 Wheat nucleus 64.15 62.34
Zm00001d052343_P001 Maize cytosol 64.63 60.63
EES09126 Sorghum mitochondrion 65.11 57.2
Bra029915.1-P Field mustard cytosol 6.59 55.41
GSMUA_Achr11P... Banana cytosol 52.57 53.43
GSMUA_Achr5P29640_001 Banana nucleus 50.64 51.14
GSMUA_Achr4P18630_001 Banana cytosol 52.25 51.1
CDY69580 Canola cytosol 42.6 50.09
CDX88670 Canola cytosol 42.6 50.0
Bra006771.1-P Field mustard cytosol 42.28 49.72
PGSC0003DMT400011279 Potato cytosol 46.62 48.66
CDY43861 Canola cytosol 43.09 48.46
CDY32991 Canola cytosol 43.57 48.31
VIT_06s0004g07920.t01 Wine grape cytosol 48.87 48.18
AT3G51630.1 Thale cress cytosol 42.44 48.09
KRH72819 Soybean cytosol 46.95 48.03
Bra002658.1-P Field mustard cytosol 43.25 47.95
PGSC0003DMT400078269 Potato cytosol 48.87 47.87
AT5G58350.1 Thale cress cytosol 43.89 47.81
Solyc09g018170.2.1 Tomato cytosol 46.46 47.69
Solyc06g082470.2.1 Tomato cytosol 48.71 47.64
KRH17174 Soybean cytosol 46.14 47.28
CDX78018 Canola nucleus 41.8 47.1
CDX73710 Canola nucleus 41.8 47.02
KRH65445 Soybean cytosol 45.82 46.72
KRH30115 Soybean cytosol 34.08 46.59
KRG98155 Soybean cytosol 45.66 46.56
KRH76107 Soybean cytosol 45.5 46.47
VIT_08s0058g01130.t01 Wine grape cytosol 46.46 46.17
Bra020372.1-P Field mustard cytosol 41.16 45.71
CDY32707 Canola cytosol 41.0 45.54
Os07t0584100-01 Rice cytosol 23.63 44.95
KRH00466 Soybean cytosol 38.42 44.26
KRH40760 Soybean cytosol 42.6 42.88
Os12t0162100-02 Rice cytosol 25.72 38.37
Bra036787.1-P Field mustard nucleus 42.6 38.24
Os11t0160300-01 Rice cytosol 26.53 37.59
Os07t0185000-01 Rice cytosol 36.01 37.27
GSMUA_Achr11P... Banana cytosol 14.15 35.63
Os02t0672800-01 Rice cytosol 32.8 33.33
Os05t0108300-01 Rice cytosol 32.48 32.53
CDY02813 Canola nucleus 41.16 31.53
Os07t0572800-01 Rice cytosol 34.24 30.26
GSMUA_Achr7P22120_001 Banana nucleus 50.16 24.22
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.2.4Gene3D:3.10.20.90Gene3D:3.30.200.20EntrezGene:4349598EMBL:AB040029
ProteinID:ABA91187.2ProteinID:ABA91188.2EMBL:AK071885ProteinID:BAF27423.1ProteinID:BAT12397.1ProteinID:EAZ17200.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0035556
InterPro:IPR000719InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os11g0114600EnsemblPlants:Os11t0114600-01PFAM:PF00069ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR13902PANTHER:PTHR13902:SF112InterPro:Prot_kinase_domUniProt:Q2RBE3SMART:SM00220
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI00006825C8RefSeq:XP_015617105.1SEG:seg:
Description
WITH NO LYSINE KINASE 7Similar to cDNA clone:J013107M03, full insert sequence. (Os11t0114600-01);Similar to cDNA clone:J013107M03, full insert sequence. (Os11t0114600-02)
Coordinates
chr11:-:655238..661236
Molecular Weight (calculated)
68667.3 Da
IEP (calculated)
6.817
GRAVY (calculated)
-0.504
Length
622 amino acids
Sequence
(BLAST)
001: MSGARRCGGR TSERSSVVGD NRNGYVETDP TGRYGRLSEV LGKGAMKTVY RGFDELRGVE VAWNQATISD VLRTPDALHR MYAEVSLLAD LRHDAIIAFH
101: ASWVHPSRRT FNFITELFSS GTLRSYRLRY PRVSRRAVAA WARAILRGLA YLHARGVIHR DLKCDNIFVN GHLGQVKIGD LGLAAVLRGC ASARSVIGTP
201: EFMAPEMYDE CYGVGVDVYS FGMCMLEMLT NEYPYSECDN PAQIYKKVTA GKLPDAFYRL TDADARRFIG RCLVDAAHRP SAEELLLDPF LSPSQNHDDH
301: NIIAHATAPP PPLPLACSNS SEEQEEAAPA PAAKTTDMAI TGKLNKEHDT IFLKVQIGGG RNVRNIYFPF DVANDTAMEV ATEMVKELDI ADREPTEIAA
401: MIEQEIVRLV PGYKQHEYSY ADDNDDDDVS GHPNPFYYLS SSPTSSQGSL CGVGSTSSEG FPGPHGKVDW SRDYCYYPPS SVSVSDDDDS STSSLSAAVS
501: ASSLHQQQQH CSASSSRLGP ASASASEDGG GGHAGRPRQR EGEEERRRRR MSRNRSMVDM RSQLLHRTLV EELNKRLFFN TVGAVHDIGF RDPTAAASSS
601: SSSSHHRRRS SNKIDHKHHY MF
Best Arabidopsis Sequence Match ( AT3G51630.1 )
(BLAST)
001: MYMEISSASD DSIAYVETDP SGRYGRFREV LGKGAMKTVY KAFDQVLGME VAWNQVKLNE VFRSPEPLQR LYSEVHLLKN LNHESIIRYC TSWIDVNRRT
101: FNFITELFTS GTLREYRRKY QKVDIRAIKS WARQILNGLA YLHGHDPPVI HRDLKCDNIF VNGHLGQVKI GDLGLAAILR GSQNAHSVIG TPEFMAPELY
201: EEDYNELVDI YSFGMCVLEM LTGEYPYSEC TNPAQIYKKV TSGKLPDSFH LIQHTEAQRF VGKCLETVSR RLPAKELLAD PFLAATDERD LAPLFRLPQQ
301: LAIQNLAANG TVVEHLPSTT DPTRTTDMSI TGKMNSEDHT IFLQVQILDG DGHMRNIQFP FNILSDTPLE VALEMVKELE ITDWDPLEIA AMIENEISLL
401: VPNWRANDSS IRHESFGHED DEDNGDTEGR TRLFSSASSS HDSPVAVREN NDDSSNDVIP DMDDGNRSSN RLLNSSTYHY SPAIDDDQNQ QQRRRVRLQQ
501: KMRSLVDTRT QVLHRSLMEL INKRRGRGFD PNTNELQPQP SSTDFIRRC
Arabidopsis Description
WNK5Probable serine/threonine-protein kinase WNK5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.