Factsheet for TraesCS1A01G239400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G239600.1	Wheat	endoplasmic reticulum	96.6	96.6
TraesCS1B01G251600.1	Wheat	golgi, peroxisome, plastid	96.03	90.23
HORVU1Hr1G057220.1	Barley	endoplasmic reticulum, extracellular	88.66	89.85
Os05t0382500-01	Rice	endoplasmic reticulum	75.05	75.48
Zm00001d038064_P001	Maize	endoplasmic reticulum	70.89	72.25
EES18148	Sorghum	endoplasmic reticulum, extracellular	69.94	70.61
GSMUA_Achr8P29580_001	Banana	endoplasmic reticulum, plasma membrane	45.56	46.17
VIT_06s0009g03630.t01	Wine grape	endoplasmic reticulum, plasma membrane	42.91	42.99
TraesCS5A01G005800.1	Wheat	cytosol	26.46	42.04
TraesCS2A01G577800.1	Wheat	endoplasmic reticulum	39.7	40.62
TraesCS4A01G063900.1	Wheat	endoplasmic reticulum	39.7	40.38
TraesCS4A01G064000.1	Wheat	endoplasmic reticulum	39.32	39.92
TraesCS3A01G332000.1	Wheat	cytosol	35.16	39.41
TraesCS5A01G137400.1	Wheat	endoplasmic reticulum	37.81	38.84
TraesCS3A01G332200.1	Wheat	endoplasmic reticulum	37.24	38.4
TraesCS1A01G351600.1	Wheat	endoplasmic reticulum	38.19	38.11
TraesCS3A01G332100.1	Wheat	endoplasmic reticulum	36.67	37.82
TraesCS2A01G015800.1	Wheat	endoplasmic reticulum, golgi	36.86	37.72
TraesCS4A01G183600.1	Wheat	endoplasmic reticulum, golgi, plastid	35.73	37.13
TraesCS5A01G129500.1	Wheat	endoplasmic reticulum, vacuole	35.35	36.81
TraesCS3A01G371200.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	36.29	36.57
TraesCS2A01G533500.1	Wheat	endoplasmic reticulum, vacuole	34.78	36.44
TraesCS1A01G277400.1	Wheat	endoplasmic reticulum	35.73	35.8
TraesCS2A01G533700.1	Wheat	extracellular, plasma membrane	34.22	35.77
TraesCS2A01G407500.1	Wheat	endoplasmic reticulum	33.08	33.08
TraesCS1A01G161400.1	Wheat	peroxisome	34.22	32.97
TraesCS3A01G368200.1	Wheat	plastid	34.03	32.85
TraesCS6A01G210500.1	Wheat	mitochondrion	31.38	32.17
TraesCS6A01G244900.1	Wheat	endoplasmic reticulum, mitochondrion	32.89	32.1

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF27	SUPFAM:SSF48264	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G239400	EnsemblPlants:TraesCS1A01G239400.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1A:+:426728853..426730442

Molecular Weight (calculated)

58454.8 Da

IEP (calculated)

8.030

GRAVY (calculated)

-0.129

Length

529 amino acids

Sequence
(BLAST)

001: MEISHLAYVL LFLFAAVVLY VQRRRASPSR TANCPHPNPV LGNTVEFIRN RGRFFDWYAD MLRASPSSTI EAWGALGASH AVTTADPAAV DHLLRASFAN
101: YNRSAQFRAA QSDLIGDGLF GADGRLWSLQ RKLASYAFSS RSLRRFTEDV LAVHLGRRFL PFLDAAAGSG EAVDLQEALR RFAFDNICHV AFGVESSTLL
201: EWGDPRHQAL FAAFDTAVEI SFMRTLKAPT PVRKLTKLLN IGQSRRLREA VGVIDDHAMS VIEAKGVSQR NSRDEGDPDL LSRFMAAMDE EDGGGELAAM
301: FPTPEAKRRF LRDVVVSFVL AGKDTTTSAL TWFFWLLAAN PRCEQRVHDE VSRSPDGNVK GMHYLHAAIT EAMRLYPPVP FNGRIAVADD VLPDGTVVRA
401: GWFANYSAYA MGRMEKLWGE NFMEFAPERW LGDSGEFAPV DAARYPVFHA GPRACLGKEM AYMQMKTVAS AVLRRFRLNV VAPAASMESP PAYEMTGTMK
501: IKGGLQVQLR MSDANKSSFA TSASGQEVD

Best Arabidopsis Sequence Match ( AT1G34540.1 )
(BLAST)

001: MALLIFIFLL CFPISIFFIF FTKKSSSEFG FKSYPIVGSF PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKQQLIMTA NPSNVEYMLK TKFESFPKGQ
101: QFTSVLEDFL GHGIFNSDGD MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLVE AATTGKLIDL QDILERFAFD NICKLAFNVD CACLGHDGAV
201: GVNFMRAFET AATIISQRFR SVASCAWRIK KKLNIGSERV LRESIATVHK FADEIVRNRI DQGRSSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV EDKILQELNS IRARTGKRIG EVYGFEHLKM MNYLHAAITE SLRLYPPVPV DIKSCAEDNV LPDGTFVGKG WAITYNIFAM
401: GRMESIWGKD CDRFDPERWI DETNGCFRGE DPSKFPAFHA GPRMCVGKDM AYIQMKSIVA AVLERFVVEV PGKERPEILL SMTLRIKGGL FARVQERS

Arabidopsis Description

CYP94D1CYP94D1 [Source:UniProtKB/TrEMBL;Acc:A0A178WEM5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.