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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038064_P001 Maize endoplasmic reticulum 88.93 89.79
Os05t0382500-01 Rice endoplasmic reticulum 74.24 73.95
TraesCS1D01G239600.1 Wheat endoplasmic reticulum 71.18 70.51
HORVU1Hr1G057220.1 Barley endoplasmic reticulum, extracellular 70.23 70.5
TraesCS1A01G239400.1 Wheat endoplasmic reticulum 70.61 69.94
TraesCS1B01G251600.1 Wheat golgi, peroxisome, plastid 71.56 66.61
EES04227 Sorghum endoplasmic reticulum, extracellular 60.31 58.63
GSMUA_Achr8P29580_001 Banana endoplasmic reticulum, plasma membrane 46.76 46.93
VIT_06s0009g03630.t01 Wine grape endoplasmic reticulum, plasma membrane 43.51 43.18
EER95239 Sorghum endoplasmic reticulum 39.89 40.35
EER92623 Sorghum endoplasmic reticulum 39.5 39.88
EES18245 Sorghum endoplasmic reticulum, golgi 39.12 39.88
OQU75917 Sorghum mitochondrion 35.11 38.57
EES15562 Sorghum endoplasmic reticulum, golgi 40.27 38.57
KXG28317 Sorghum endoplasmic reticulum 38.36 38.43
EES03915 Sorghum plastid 38.17 37.74
EER95246 Sorghum cytosol 32.25 36.82
EES16641 Sorghum endoplasmic reticulum 35.5 36.54
EES19608 Sorghum plastid 37.21 36.45
EES07097 Sorghum golgi 37.21 36.38
OQU82886 Sorghum endoplasmic reticulum, plasma membrane 35.11 36.15
KXG38289 Sorghum plastid 36.45 34.85
OQU85673 Sorghum cytosol 32.25 34.21
OQU87885 Sorghum plastid 35.31 33.82
EES12648 Sorghum endoplasmic reticulum 34.35 33.46
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8076827UniProt:C5YXD3InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EES18148ProteinID:EES18148ProteinID:EES18148.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705GO:GO:0020037
GO:GO:0046872GO:GO:0055114InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24296PANTHER:PTHR24296:SF27EnsemblPlantsGene:SORBI_3009G121600SUPFAM:SSF48264TMHMM:TMhelix
UniParc:UPI0001A88DA0RefSeq:XP_002439718.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr9:+:47228235..47230069
Molecular Weight (calculated)
58170.8 Da
IEP (calculated)
8.563
GRAVY (calculated)
-0.103
Length
524 amino acids
Sequence
(BLAST)
001: MEAIRLAYVL VFLLPFFLLL LRLRKRPATT TAHSPHPNPV LGNTLAFIRN RRRFFDWYTD LLRAAPSGAA VEAWGPFGAG HAVTTASPAD VDHLLRAGFD
101: GYARGALFRD ATADLIGDGL FAADGRLWSL QRKLASHAFS SRSLRRFTGD VLAVHLRRRF LPLLDAAAAR DGGDVAVDLQ DALRRFGFRT ICHVAFGVEG
201: LDGNDDEDPA TQEALFAAFD TAVEISFRRA LTPATFVRRL TKLLDVGKSR RLREAVRVID DYAMSVVESK AARRQRNNLD DGSADLLSRF MAATDDDGGS
301: ELGAMFATPE AKLRFLRDMV VTFVLAGKDT TSSALTWFFW LLAANPRCER RAHEEAASCC DDDDDDGDVK GMHYLHAAIT EAMRLYPPVP FNGRVAVRDD
401: VLPGGAAVRA GWYANYSAYA MGRMEKLWGK DCLEFVPERW LGERGEFVPV DAARFPVFHA GPRVCLGKEM AYVQMKTVAA ALLRRFRVDV VAPVANMEAP
501: PAYEMTATMK MKGGLWVRLR RRED
Best Arabidopsis Sequence Match ( AT1G34540.1 )
(BLAST)
001: MALLIFIFLL CFPISIFFIF FTKKSSSEFG FKSYPIVGSF PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKQQLIMTA NPSNVEYMLK TKFESFPKGQ
101: QFTSVLEDFL GHGIFNSDGD MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLVE AATTGKLIDL QDILERFAFD NICKLAFNVD CACLGHDGAV
201: GVNFMRAFET AATIISQRFR SVASCAWRIK KKLNIGSERV LRESIATVHK FADEIVRNRI DQGRSSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV EDKILQELNS IRARTGKRIG EVYGFEHLKM MNYLHAAITE SLRLYPPVPV DIKSCAEDNV LPDGTFVGKG WAITYNIFAM
401: GRMESIWGKD CDRFDPERWI DETNGCFRGE DPSKFPAFHA GPRMCVGKDM AYIQMKSIVA AVLERFVVEV PGKERPEILL SMTLRIKGGL FARVQERS
Arabidopsis Description
CYP94D1CYP94D1 [Source:UniProtKB/TrEMBL;Acc:A0A178WEM5]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.