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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 5
  • vacuole 3
  • plasma membrane 3
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G154600.1 Wheat endoplasmic reticulum 72.76 78.04
TraesCS5B01G136100.1 Wheat endoplasmic reticulum 72.21 77.91
TraesCS5A01G137400.1 Wheat endoplasmic reticulum 72.94 77.48
Os12t0134900-01 Rice endoplasmic reticulum, extracellular 72.94 77.03
TraesCS5A01G005800.1 Wheat cytosol 44.97 73.87
TraesCS5D01G006800.1 Wheat endoplasmic reticulum, golgi 66.91 72.05
EES18245 Sorghum endoplasmic reticulum, golgi 54.11 57.59
Bra003246.1-P Field mustard cytosol 43.51 56.26
OQU75917 Sorghum mitochondrion 48.08 55.14
KRH66690 Soybean endoplasmic reticulum 48.63 54.06
EER95239 Sorghum endoplasmic reticulum 50.82 53.67
EER92623 Sorghum endoplasmic reticulum 50.64 53.37
VIT_08s0040g00820.t01 Wine grape endoplasmic reticulum 48.63 53.2
CDY32022 Canola endoplasmic reticulum 48.45 53.11
CDX67653 Canola endoplasmic reticulum 48.45 53.0
CDY32023 Canola endoplasmic reticulum 48.08 52.6
CDX67652 Canola endoplasmic reticulum 48.08 52.6
AT3G56630.1 Thale cress endoplasmic reticulum 47.9 52.51
AT1G34540.1 Thale cress endoplasmic reticulum 47.35 52.01
Bra003247.1-P Field mustard endoplasmic reticulum 47.53 52.0
Bra007259.1-P Field mustard endoplasmic reticulum 46.8 51.93
CDX72120 Canola endoplasmic reticulum 46.98 51.92
CDY56777 Canola endoplasmic reticulum, extracellular 46.62 51.62
Solyc10g078280.2.1 Tomato endoplasmic reticulum, golgi 45.34 50.3
PGSC0003DMT400018545 Potato endoplasmic reticulum 45.7 50.3
EER95246 Sorghum cytosol 41.5 49.46
GSMUA_Achr9P21030_001 Banana endoplasmic reticulum, golgi 33.09 48.14
GSMUA_Achr11P... Banana extracellular, golgi 33.82 46.48
GSMUA_Achr7P17780_001 Banana endoplasmic reticulum, golgi 34.73 44.19
EES04227 Sorghum endoplasmic reticulum, extracellular 42.6 43.23
KXG28317 Sorghum endoplasmic reticulum 40.04 41.87
EES03915 Sorghum plastid 40.4 41.7
OQU82886 Sorghum endoplasmic reticulum, plasma membrane 38.76 41.65
EES16641 Sorghum endoplasmic reticulum 38.39 41.26
EES07097 Sorghum golgi 39.49 40.3
EES18148 Sorghum endoplasmic reticulum, extracellular 38.57 40.27
EES19608 Sorghum plastid 38.76 39.63
OQU85673 Sorghum cytosol 35.65 39.47
EES12648 Sorghum endoplasmic reticulum 38.21 38.85
OQU87885 Sorghum plastid 36.75 36.75
KXG38289 Sorghum plastid 36.56 36.5
GSMUA_Achr2P03460_001 Banana extracellular, golgi 38.94 26.59
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8071418UniProt:C5YQL3InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EES15562ProteinID:EES15562ProteinID:EES15562.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705GO:GO:0020037
GO:GO:0046872GO:GO:0055114InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24296PANTHER:PTHR24296:SF77EnsemblPlantsGene:SORBI_3008G015000SUPFAM:SSF48264TMHMM:TMhelix
UniParc:UPI0001A8839DRefSeq:XP_002441724.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr8:+:1249662..1251305
Molecular Weight (calculated)
60340.3 Da
IEP (calculated)
8.130
GRAVY (calculated)
-0.155
Length
547 amino acids
Sequence
(BLAST)
001: MATVSSSSSE LQSSSLTLLV LLPVIYISYH LIKRALTPTK KKTKKPTTHG LKSHPLLGHL PAFLKNRHRF LDWSTELIVG SPDHRMGFWI PGMRTGIVTG
101: NPADVEHVLR ANFANYPKGD RATAMLRDFL GAGLFNSDGE QWLWQRKNAS REFSSRSLRS FVVDVVSDEV AGRLLPLLRS AADGYGHGHG RVVLDLQDVL
201: ERSAFDTICM VAFGHDPCCL CLADGGGDGG VCWADDSKSE FMRAFGEAQD LIIGRFLDPV EVSWKVKKWL NVGTERRLKK AIADVHAFAM DIVRARRQSA
301: SASASADQSQ RDDVLSRFVA SAEHSDETLR DIVLSFLIAG RETTSSALTW FFWLLSSSPP AVTARILAEV RGARASTGTR RGQPLGFDAL RGMHYLHAAL
401: TESMRLYPPV PLDSQSCAED DTLPDGTHVG KGWSVTYSAY AMGRIPAIWG DDCAEFRPER WLGDDGVFRP ESPFRYTVFH AGPRMCLGKE MAYVQMKSVV
501: ACVLEEFVVD VRKEVAGGSG GVPEHVLSVT LRMKGGLPVQ VRRREEC
Best Arabidopsis Sequence Match ( AT3G56630.1 )
(BLAST)
001: MEHFILISLL CFPIVIFFIF FPKNSSSEFG FKSYPIVGSL PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKLQFVMTA NPANVEYMLK TKFESFPKGE
101: RFISILEDFL GRGIFNSDGE MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLAE AATNGKLIDL QDILERFAFD NICKLAFNVD SACLGDDGAA
201: GVNFMQAFET AATIISQRFQ SVISYSWKIK KKLNIGSERV LRESIMIVHK FADEIVRNRI EQGKVSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV KDKILQELNS IRERTGKRIG EVYGFEDLKL MNYLHAAITE SLRLYPPVPV DTMSCAEDNV LPDGTFIGKD WGISYNAYAM
401: GRMESIWGKD CDRFDPERWI DETNGGFRGE NPYKFPAFHA GPRMCLGKEM AYIQMKSIVA AVLERFVVEV PGKKERPEIL MSVTLRIRGG LNVRVQERS
Arabidopsis Description
CYP94D2CYP94D2 [Source:UniProtKB/TrEMBL;Acc:A0A178V9L2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.