CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045188_P001	Maize	endoplasmic reticulum, golgi	85.33	77.52
TraesCS3A01G332000.1	Wheat	cytosol	71.49	72.25
TraesCS3B01G362400.1	Wheat	endoplasmic reticulum	74.0	69.08
TraesCS3D01G325500.1	Wheat	endoplasmic reticulum	74.0	68.81
Os01t0804400-01	Rice	endoplasmic reticulum	72.54	67.71
HORVU3Hr1G078760.1	Barley	endoplasmic reticulum	73.38	67.44
EES18245	Sorghum	endoplasmic reticulum, golgi	71.7	66.54
Os01t0803900-01	Rice	mitochondrion	72.75	66.1
TraesCS2A01G015800.1	Wheat	endoplasmic reticulum, golgi	67.92	62.67
HORVU6Hr1G002700.1	Barley	endoplasmic reticulum	66.67	62.11
TraesCS2D01G007600.1	Wheat	mitochondrion	66.46	61.08
Bra003246.1-P	Field mustard	cytosol	48.01	54.14
KRH66690	Soybean	endoplasmic reticulum	50.52	48.98
EES15562	Sorghum	endoplasmic reticulum, golgi	55.14	48.08
AT1G34540.1	Thale cress	endoplasmic reticulum	49.48	47.39
AT3G56630.1	Thale cress	endoplasmic reticulum	48.64	46.49
CDY32022	Canola	endoplasmic reticulum	48.64	46.49
CDX67652	Canola	endoplasmic reticulum	48.64	46.4
Bra007259.1-P	Field mustard	endoplasmic reticulum	47.59	46.04
VIT_08s0040g00820.t01	Wine grape	endoplasmic reticulum	48.22	46.0
Solyc10g078280.2.1	Tomato	endoplasmic reticulum, golgi	47.38	45.84
CDY32023	Canola	endoplasmic reticulum	48.01	45.8
CDY56777	Canola	endoplasmic reticulum, extracellular	47.38	45.75
CDX72120	Canola	endoplasmic reticulum	47.17	45.45
EER95239	Sorghum	endoplasmic reticulum	49.06	45.17
PGSC0003DMT400018545	Potato	endoplasmic reticulum	46.96	45.07
CDX67653	Canola	endoplasmic reticulum	47.17	45.0
EER92623	Sorghum	endoplasmic reticulum	48.43	44.51
Bra003247.1-P	Field mustard	endoplasmic reticulum	46.54	44.4
EER95246	Sorghum	cytosol	41.72	43.36
GSMUA_Achr9P21030_001	Banana	endoplasmic reticulum, golgi	32.08	40.69
GSMUA_Achr11P...	Banana	extracellular, golgi	33.54	40.2
OQU85673	Sorghum	cytosol	40.88	39.47
EES03915	Sorghum	plastid	40.67	36.6
GSMUA_Achr7P17780_001	Banana	endoplasmic reticulum, golgi	32.91	36.51
EES12648	Sorghum	endoplasmic reticulum	41.09	36.43
EES19608	Sorghum	plastid	40.67	36.26
EES04227	Sorghum	endoplasmic reticulum, extracellular	40.67	35.99
EES16641	Sorghum	endoplasmic reticulum	38.36	35.95
KXG28317	Sorghum	endoplasmic reticulum	39.2	35.76
EES07097	Sorghum	golgi	40.04	35.63
OQU82886	Sorghum	endoplasmic reticulum, plasma membrane	37.95	35.56
EES18148	Sorghum	endoplasmic reticulum, extracellular	38.57	35.11
OQU87885	Sorghum	plastid	38.57	33.64
KXG38289	Sorghum	plastid	37.11	32.3
GSMUA_Achr2P03460_001	Banana	extracellular, golgi	40.46	24.09

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	UniProt:A0A1W0VRK5	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	EnsemblPlants:OQU75917	ProteinID:OQU75917	ProteinID:OQU75917.1	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF23	EnsemblPlantsGene:SORBI_3010G055300
SUPFAM:SSF48264	UniParc:UPI0009DC848B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:4315623..4318903

Molecular Weight (calculated)

53718.2 Da

IEP (calculated)

6.000

GRAVY (calculated)

-0.223

Length

477 amino acids

Sequence
(BLAST)

001: MGVVLTPRKN GAVKVVALVP IDLKSTYATD GDRIVYWLCR SISNRIEHIL KTNFANYPKG ELTVSMIEDF LGHGIFNSDG EQWLWQRKAA SYEFSKRSLR
101: NFVVDAVRFE VVERLLPLLD RARRDGRSVD VQDVLERFAL DNICRVAFGE DPACLAEEGG MAASESAEFM RAFNDAQSAI MARFMSPVKS LWRLKRLLNL
201: EPERRMREAV GTIHGYADRI IRERRARGEA AGPAACGRDD DFLSRFAASG EHSDESLRDV VTNFLLAGRD TTSSALTWFF WLISTRPDVE EKIVREVRAV
301: RRASSGQESA GAAPATFSFD ELRDMQYLHA AITESMRLYP PVAMDTHSCK EDDFLPDGTF VGQGWLTTYS AFAMGRVEDI WGEDCEEFRP ERWIGDDGAF
401: RPESPFKYPV FHAGPRMCLG KEMAYIQMKS IVACVLERFS FQFVGGEGRP GLVLSLTLRM EGGLTMKVIT RTNSALV

Best Arabidopsis Sequence Match ( AT3G56630.1 )
(BLAST)

001: MEHFILISLL CFPIVIFFIF FPKNSSSEFG FKSYPIVGSL PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKLQFVMTA NPANVEYMLK TKFESFPKGE
101: RFISILEDFL GRGIFNSDGE MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLAE AATNGKLIDL QDILERFAFD NICKLAFNVD SACLGDDGAA
201: GVNFMQAFET AATIISQRFQ SVISYSWKIK KKLNIGSERV LRESIMIVHK FADEIVRNRI EQGKVSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV KDKILQELNS IRERTGKRIG EVYGFEDLKL MNYLHAAITE SLRLYPPVPV DTMSCAEDNV LPDGTFIGKD WGISYNAYAM
401: GRMESIWGKD CDRFDPERWI DETNGGFRGE NPYKFPAFHA GPRMCLGKEM AYIQMKSIVA AVLERFVVEV PGKKERPEIL MSVTLRIRGG LNVRVQERS

Arabidopsis Description

CYP94D2CYP94D2 [Source:UniProtKB/TrEMBL;Acc:A0A178V9L2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.