CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042087_P001	Maize	endoplasmic reticulum	86.64	87.62
Os01t0951500-01	Rice	plasma membrane	74.21	73.26
TraesCS3B01G546300.1	Wheat	endoplasmic reticulum	71.8	72.47
HORVU3Hr1G108150.1	Barley	endoplasmic reticulum	71.43	72.1
EES18148	Sorghum	endoplasmic reticulum, extracellular	58.63	60.31
GSMUA_Achr8P29580_001	Banana	endoplasmic reticulum, plasma membrane	49.54	51.15
VIT_06s0009g03630.t01	Wine grape	endoplasmic reticulum, plasma membrane	45.27	46.21
EER95239	Sorghum	endoplasmic reticulum	43.04	44.79
EER92623	Sorghum	endoplasmic reticulum	42.67	44.32
EES15562	Sorghum	endoplasmic reticulum, golgi	43.23	42.6
EES18245	Sorghum	endoplasmic reticulum, golgi	40.26	42.22
EER95246	Sorghum	cytosol	35.62	41.83
KXG28317	Sorghum	endoplasmic reticulum	39.7	40.92
OQU75917	Sorghum	mitochondrion	35.99	40.67
OQU82886	Sorghum	endoplasmic reticulum, plasma membrane	36.73	38.9
EES03915	Sorghum	plastid	38.03	38.68
EES07097	Sorghum	golgi	38.4	38.62
EES16641	Sorghum	endoplasmic reticulum	36.36	38.51
EES19608	Sorghum	plastid	37.66	37.94
KXG38289	Sorghum	plastid	36.92	36.31
OQU87885	Sorghum	plastid	36.73	36.2
EES12648	Sorghum	endoplasmic reticulum	35.06	35.13
OQU85673	Sorghum	cytosol	32.1	35.02

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	EntrezGene:8077361	UniProt:C5XHX0	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	EnsemblPlants:EES04227	ProteinID:EES04227	ProteinID:EES04227.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396
PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF27
EnsemblPlantsGene:SORBI_3003G427500	SUPFAM:SSF48264	unigene:Sbi.19630	SignalP:SignalP-noTM	UniParc:UPI0001A8573B	RefSeq:XP_002459107.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:73085720..73088203

Molecular Weight (calculated)

59307.0 Da

IEP (calculated)

7.447

GRAVY (calculated)

-0.123

Length

539 amino acids

Sequence
(BLAST)

001: MDAAVAPLLV LGVTVAILLS TGLRCRAGHR NHCPYPNPVL GNVVPFVRNF HRFLDWATDQ LAAAPTSTIE VRGALGLGNG VATADPGVVD HLLRAGFPNY
101: VKGARFAGPF ADLLGSGIFL ADGRLWSLQR KLASYSFSSR SLRRFSGRVL RAHLHRRLLP LLAAAADSGE AVDLQDVLKR FAFDNICGVA FGVEASTLLD
201: LGEEDGGGRG RRRRHDAFFK AFDDAVEISF ARMLHPTAVV WKAMRLAGVG SERRLREAIC VVDEHVTEIM ESEERSRRDG NGQHLLSRFA VAMEEDEGSE
301: LGAMFQSPEA KRRFLRDIVV SFVLAGKDST SSALTWFFWL LAANPLCERR VYEEASSLSD LHGHGDDDHG VDDEGGYDEL RGMHYLHAAI TEAMRLYPPV
401: PINSKVAAAG EVLPDGTTVR AGWFSDYCAY AMGRMPRLWG DDCREFRPER WLDGGGEFVA VDAARYPVFH AGPRACLGKE MAYVQMKTVV AAVVRRFAVE
501: PVRAASMEAP PPYEMAVTLR MKGGLPVRIR RRESDAGRH

Best Arabidopsis Sequence Match ( AT1G34540.1 )
(BLAST)

001: MALLIFIFLL CFPISIFFIF FTKKSSSEFG FKSYPIVGSF PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKQQLIMTA NPSNVEYMLK TKFESFPKGQ
101: QFTSVLEDFL GHGIFNSDGD MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLVE AATTGKLIDL QDILERFAFD NICKLAFNVD CACLGHDGAV
201: GVNFMRAFET AATIISQRFR SVASCAWRIK KKLNIGSERV LRESIATVHK FADEIVRNRI DQGRSSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV EDKILQELNS IRARTGKRIG EVYGFEHLKM MNYLHAAITE SLRLYPPVPV DIKSCAEDNV LPDGTFVGKG WAITYNIFAM
401: GRMESIWGKD CDRFDPERWI DETNGCFRGE DPSKFPAFHA GPRMCVGKDM AYIQMKSIVA AVLERFVVEV PGKERPEILL SMTLRIKGGL FARVQERS

Arabidopsis Description

CYP94D1CYP94D1 [Source:UniProtKB/TrEMBL;Acc:A0A178WEM5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.