Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • cytosol 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES16641 Sorghum endoplasmic reticulum 89.78 89.78
Zm00001d052530_P001 Maize endoplasmic reticulum, golgi 70.73 88.89
Os12t0150200-01 Rice endoplasmic reticulum 81.93 81.93
Os11t0151400-01 Rice endoplasmic reticulum, golgi, plastid 80.55 78.85
TraesCS5B01G128100.1 Wheat endoplasmic reticulum, vacuole 78.0 78.15
TraesCS5D01G137000.1 Wheat endoplasmic reticulum, vacuole 77.8 77.95
HORVU5Hr1G042030.1 Barley endoplasmic reticulum, vacuole 77.8 77.95
TraesCS5A01G129500.1 Wheat endoplasmic reticulum, vacuole 77.6 77.76
TraesCS2D01G535800.1 Wheat mitochondrion 61.89 77.02
TraesCS2D01G535700.1 Wheat extracellular, plasma membrane 75.44 76.19
TraesCS2A01G533700.1 Wheat extracellular, plasma membrane 75.64 76.09
HORVU2Hr1G117140.3 Barley endoplasmic reticulum 75.64 76.09
HORVU2Hr1G117080.3 Barley endoplasmic reticulum, extracellular 75.64 76.09
HORVU2Hr1G117150.1 Barley endoplasmic reticulum, plasma membrane 76.03 76.03
TraesCS2A01G533500.1 Wheat endoplasmic reticulum, vacuole 74.85 75.45
TraesCS2B01G563200.1 Wheat extracellular, plasma membrane 75.05 75.05
TraesCS2B01G563300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 75.25 73.94
GSMUA_Achr6P07480_001 Banana extracellular, golgi 48.92 66.05
GSMUA_Achr5P16800_001 Banana extracellular, golgi 55.8 65.89
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 48.92 63.52
VIT_06s0080g00090.t01 Wine grape cytosol 52.06 59.55
VIT_13s0074g00790.t01 Wine grape cytosol 54.22 58.85
EES03915 Sorghum plastid 61.1 58.68
GSMUA_Achr8P29660_001 Banana endoplasmic reticulum, plasma membrane 49.12 58.28
EES19608 Sorghum plastid 60.9 57.94
KRH30469 Soybean plastid 55.21 55.53
KRH25192 Soybean plastid 54.42 55.18
Solyc06g074420.1.1 Tomato endoplasmic reticulum 51.87 54.43
PGSC0003DMT400018331 Potato endoplasmic reticulum 52.26 54.4
AT2G27690.1 Thale cress endoplasmic reticulum 52.26 53.74
CDX71432 Canola endoplasmic reticulum, extracellular 51.47 53.14
CDY04506 Canola endoplasmic reticulum, extracellular 51.28 53.05
Bra012006.1-P Field mustard endoplasmic reticulum, extracellular 51.67 52.92
PGSC0003DMT400022922 Potato cytosol 37.92 52.45
Solyc10g083400.1.1 Tomato endoplasmic reticulum 50.49 51.71
PGSC0003DMT400023141 Potato endoplasmic reticulum, plasma membrane 50.29 51.61
PGSC0003DMT400050139 Potato endoplasmic reticulum, plasma membrane 51.28 51.28
KRH30881 Soybean endoplasmic reticulum, plasma membrane, plastid 50.69 49.43
VIT_08s0007g03660.t01 Wine grape endoplasmic reticulum, plasma membrane 53.05 49.18
KRH67891 Soybean endoplasmic reticulum, plasma membrane 51.87 48.89
KXG28317 Sorghum endoplasmic reticulum 42.63 41.49
EES15562 Sorghum endoplasmic reticulum, golgi 41.65 38.76
EES18245 Sorghum endoplasmic reticulum, golgi 38.9 38.52
EER95239 Sorghum endoplasmic reticulum 38.9 38.22
EER92623 Sorghum endoplasmic reticulum 38.9 38.15
OQU75917 Sorghum mitochondrion 35.56 37.95
EES04227 Sorghum endoplasmic reticulum, extracellular 38.9 36.73
EES07097 Sorghum golgi 38.31 36.38
OQU85673 Sorghum cytosol 34.58 35.63
EES18148 Sorghum endoplasmic reticulum, extracellular 36.15 35.11
EER95246 Sorghum cytosol 31.63 35.08
OQU87885 Sorghum plastid 36.74 34.19
KXG38289 Sorghum plastid 35.56 33.03
EES12648 Sorghum endoplasmic reticulum 34.58 32.71
Protein Annotations
Gene3D:1.10.630.10MapMan:11.7.3.3EntrezGene:8058537UniProt:A0A1Z5RHQ4InterPro:Cyt_P450InterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016705GO:GO:0020037GO:GO:0055114
InterPro:IPR036396EnsemblPlants:OQU82886ProteinID:OQU82886ProteinID:OQU82886.1PFAM:PF00067PRINTS:PR00385
PANTHER:PTHR24296PANTHER:PTHR24296:SF30EnsemblPlantsGene:SORBI_3005G037000SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0001A86859
RefSeq:XP_002450277.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr5:-:3378652..3380473
Molecular Weight (calculated)
54976.4 Da
IEP (calculated)
8.213
GRAVY (calculated)
0.176
Length
509 amino acids
Sequence
(BLAST)
001: MEAADSSLPW AAQCLGAALF AAALCVAALG VVLTLLRRWP WCSCHVCRAY LTGSWARDFT NLGDWYAHLL RDSPTGTVHV HVLGCTVTAN PANVEYMLRT
101: NFDNFPKGKA FAAVLGDLLG GGIFNVDGHA WLHQRKMASL ELGSVAVRSY AFGIVAQEVE SRLVPVLASA ADAGAVVDLQ DVFRRFAFDT ICKISFGLDP
201: GCLDLEMPVS KLADAFDTAT RLCAMRGAAA SPLLWKAKRL LNVGSERELR EAIKLVDELS AAMIRERRKL GVAGSHDLLS RFMASSGDAR HDVDDKYLRD
301: IVVSFLLAGR DTVSSALTTL FMLLSKNPAV ASAMRAEAAG GDESTAALTY EHLKRLHYTH AVLYENMRLF PPVQFDSKFS AGSDVLPDGT YVAGGTRVTY
401: HPYAMGRMPR IWGADHGAFR PDRWLTGPGG TFVPESLYRY PVFQAGLRVC LGKELAVTEM KAVAVAVVRA FDVEVVGDGG NAACAPKFVS GLTASISGGL
501: PVRIRRVVR
Best Arabidopsis Sequence Match ( AT2G27690.1 )
(BLAST)
001: MLLIISFTIV SFFFIIIFSL FHLLFLQKLR YCNCEICHAY LTSSWKKDFI NLSDWYTHLL RRSPTSTIKV HVLNSVITAN PSNVEHILKT NFHNYPKGKQ
101: FSVILGDLLG RGIFNSDGDT WRFQRKLASL ELGSVSVRVF AHEIVKTEIE TRLLPILTSF SDNPGSVLDL QDVFRRFSFD TISKLSFGFD PDCLRLPFPI
201: SEFAVAFDTA SLLSAKRALA PFPLLWKTKR LLRIGSEKKL QESINVINRL AGDLIKQRRL TGLMGKNDLI SRFMAVVAED DDEYLRDIVV SFLLAGRDTV
301: AAGLTGFFWL LTRHPEVENR IREELDRVMG TGFDSVTARC DEMREMDYLH ASLYESMRLF PPVQFDSKFA LNDDVLSDGT FVNSGTRVTY HAYAMGRMDR
401: IWGPDYEEFK PERWLDNEGK FRPENPVKYP VFQAGARVCI GKEMAIMEMK SIAVAIIRRF ETRVASPETT ETLRFAPGLT ATVNGGLPVM IQERS
Arabidopsis Description
CYP94C1Cytochrome P450 94C1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.