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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 3
  • golgi 3
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G128100.1 Wheat endoplasmic reticulum, vacuole 97.05 97.05
TraesCS5D01G137000.1 Wheat endoplasmic reticulum, vacuole 97.05 97.05
TraesCS5A01G129500.1 Wheat endoplasmic reticulum, vacuole 96.65 96.65
HORVU2Hr1G117140.3 Barley endoplasmic reticulum 91.14 91.5
HORVU2Hr1G117080.3 Barley endoplasmic reticulum, extracellular 90.94 91.3
HORVU2Hr1G117150.1 Barley endoplasmic reticulum, plasma membrane 89.37 89.19
Os12t0150200-01 Rice endoplasmic reticulum 80.12 79.96
EES16641 Sorghum endoplasmic reticulum 78.74 78.59
Os11t0151400-01 Rice endoplasmic reticulum, golgi, plastid 80.12 78.27
Zm00001d023413_P001 Maize endoplasmic reticulum, extracellular 75.59 78.21
OQU82886 Sorghum endoplasmic reticulum, plasma membrane 77.95 77.8
Zm00001d023400_P002 Maize endoplasmic reticulum 77.76 77.6
Zm00001d044703_P001 Maize endoplasmic reticulum, extracellular 75.2 76.71
HORVU4Hr1G025180.1 Barley endoplasmic reticulum, vacuole 79.13 76.14
Zm00001d052530_P001 Maize endoplasmic reticulum, golgi 60.24 75.56
GSMUA_Achr6P07480_001 Banana extracellular, golgi 48.82 65.78
GSMUA_Achr5P16800_001 Banana extracellular, golgi 55.31 65.2
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 48.82 63.27
VIT_06s0080g00090.t01 Wine grape cytosol 51.57 58.88
VIT_13s0074g00790.t01 Wine grape cytosol 54.33 58.85
GSMUA_Achr8P29660_001 Banana endoplasmic reticulum, plasma membrane 49.61 58.74
KRH25192 Soybean plastid 55.71 56.37
KRH30469 Soybean plastid 56.1 56.32
HORVU3Hr1G084450.1 Barley endoplasmic reticulum 57.48 56.15
HORVU1Hr1G073700.1 Barley endoplasmic reticulum, plasma membrane, plastid 57.09 56.09
Solyc06g074420.1.1 Tomato endoplasmic reticulum 52.36 54.85
PGSC0003DMT400023141 Potato endoplasmic reticulum, plasma membrane 53.35 54.64
AT2G27690.1 Thale cress endoplasmic reticulum 53.15 54.55
PGSC0003DMT400022922 Potato cytosol 39.17 54.08
CDY04506 Canola endoplasmic reticulum, extracellular 52.36 54.06
PGSC0003DMT400018331 Potato endoplasmic reticulum 51.97 53.99
CDX71432 Canola endoplasmic reticulum, extracellular 52.36 53.96
Bra012006.1-P Field mustard endoplasmic reticulum, extracellular 52.76 53.92
Solyc10g083400.1.1 Tomato endoplasmic reticulum 52.36 53.52
PGSC0003DMT400050139 Potato endoplasmic reticulum, plasma membrane 51.77 51.67
KRH30881 Soybean endoplasmic reticulum, plasma membrane, plastid 52.95 51.53
VIT_08s0007g03660.t01 Wine grape endoplasmic reticulum, plasma membrane 54.33 50.27
KRH67891 Soybean endoplasmic reticulum, plasma membrane 51.57 48.52
HORVU2Hr1G124430.1 Barley endoplasmic reticulum 40.35 39.42
HORVU4Hr1G066870.1 Barley endoplasmic reticulum 39.96 38.3
HORVU4Hr1G066880.1 Barley endoplasmic reticulum 39.37 38.24
HORVU6Hr1G002700.1 Barley endoplasmic reticulum 37.2 36.91
HORVU3Hr1G078790.2 Barley endoplasmic reticulum, golgi 36.61 36.69
HORVU1Hr1G080680.1 Barley golgi, peroxisome, plastid 41.14 36.28
HORVU3Hr1G078810.1 Barley endoplasmic reticulum, golgi 37.01 35.88
HORVU6Hr1G053810.2 Barley endoplasmic reticulum 36.61 35.36
HORVU3Hr1G078760.1 Barley endoplasmic reticulum 36.02 35.26
HORVU1Hr1G057220.1 Barley endoplasmic reticulum, extracellular 36.22 35.25
HORVU5Hr1G098210.3 Barley mitochondrion 35.63 34.61
HORVU3Hr1G108150.1 Barley endoplasmic reticulum 35.24 33.52
HORVU3Hr1G085020.1 Barley endoplasmic reticulum, plasma membrane 36.22 33.39
HORVU6Hr1G064170.1 Barley plasma membrane 35.43 33.03
HORVU1Hr1G042810.1 Barley mitochondrion 36.42 30.78
Protein Annotations
Gene3D:1.10.630.10MapMan:11.7.3.3EMBL:AK357615InterPro:Cyt_P450InterPro:Cyt_P450_sfUniProt:F2D158
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016705GO:GO:0020037GO:GO:0055114
EnsemblPlantsGene:HORVU5Hr1G042030EnsemblPlants:HORVU5Hr1G042030.1InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PANTHER:PTHR24296
PANTHER:PTHR24296:SF30SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI00020050C9SEG:seg:
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D158]
Coordinates
chrchr5H:-:319885456..319887929
Molecular Weight (calculated)
55911.5 Da
IEP (calculated)
8.527
GRAVY (calculated)
0.056
Length
508 amino acids
Sequence
(BLAST)
001: MDAMELSWGA RCAGLAFFVL SILVVALAAV LLLVRRWPWC SCHVCRTYLT GSWAKDFTNL GDWYAHLLRE SPTGTVHIHV LGCTVTANPA NVEYMLKTNF
101: DNFPKGKRFA ALLGDLLGGG IFNVDGDAWR HQRKMASLEL GSVTVRSYAY KIVAHEVETR LLPVLADAAD KGKVVDLQDV FRRFAFDTIC KISFGLDPGC
201: LDLDMPMSDL ANAFDTASRL SAMRGAAASP FVWKLKRMLN IGSERELKKA IKLVDDLASA MILQRRKLGF ENSHDLLSRF MASDGDVQAM DNKYLRDIVV
301: SFLLAGRDTV ASALTTLFIH LSKNPEVAAA IRTEAGGDKP STYEHLKSLQ YTHAVLYENM RLFPPVQFDS KFSAAADVLP DGTYVEGESR VMYHPYAMGR
401: MPSIWGADYE AFRPDRWLTG PGGSFAPASL YKYPVFQAGL RVCLGKELAV TEMKAVSVAV VRAFDVEVVG ENGRSGWAPR FVAGLTASIS GGLPVRIKRA
501: STSSSDFR
Best Arabidopsis Sequence Match ( AT2G27690.1 )
(BLAST)
001: MLLIISFTIV SFFFIIIFSL FHLLFLQKLR YCNCEICHAY LTSSWKKDFI NLSDWYTHLL RRSPTSTIKV HVLNSVITAN PSNVEHILKT NFHNYPKGKQ
101: FSVILGDLLG RGIFNSDGDT WRFQRKLASL ELGSVSVRVF AHEIVKTEIE TRLLPILTSF SDNPGSVLDL QDVFRRFSFD TISKLSFGFD PDCLRLPFPI
201: SEFAVAFDTA SLLSAKRALA PFPLLWKTKR LLRIGSEKKL QESINVINRL AGDLIKQRRL TGLMGKNDLI SRFMAVVAED DDEYLRDIVV SFLLAGRDTV
301: AAGLTGFFWL LTRHPEVENR IREELDRVMG TGFDSVTARC DEMREMDYLH ASLYESMRLF PPVQFDSKFA LNDDVLSDGT FVNSGTRVTY HAYAMGRMDR
401: IWGPDYEEFK PERWLDNEGK FRPENPVKYP VFQAGARVCI GKEMAIMEMK SIAVAIIRRF ETRVASPETT ETLRFAPGLT ATVNGGLPVM IQERS
Arabidopsis Description
CYP94C1Cytochrome P450 94C1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.