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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
TargetP:secretory
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G577800.1 Wheat endoplasmic reticulum 87.12 87.62
TraesCS2D01G589200.1 Wheat endoplasmic reticulum 86.73 86.73
HORVU4Hr1G066870.1 Barley endoplasmic reticulum 81.73 80.19
HORVU4Hr1G066880.1 Barley endoplasmic reticulum 79.81 79.35
Zm00001d028258_P001 Maize endoplasmic reticulum 72.69 72.83
Zm00001d028278_P001 Maize endoplasmic reticulum 70.58 71.68
EER92623 Sorghum endoplasmic reticulum 71.35 71.48
Os03t0223100-02 Rice endoplasmic reticulum, golgi 73.65 70.93
EER95239 Sorghum endoplasmic reticulum 70.0 70.27
EER95246 Sorghum cytosol 60.38 68.41
KRH66690 Soybean endoplasmic reticulum 51.73 54.67
HORVU3Hr1G078790.2 Barley endoplasmic reticulum, golgi 51.35 52.66
Solyc10g078280.2.1 Tomato endoplasmic reticulum, golgi 49.81 52.54
HORVU3Hr1G078760.1 Barley endoplasmic reticulum 51.54 51.64
VIT_08s0040g00820.t01 Wine grape endoplasmic reticulum 49.62 51.6
Bra003246.1-P Field mustard cytosol 41.73 51.3
PGSC0003DMT400018545 Potato endoplasmic reticulum 48.65 50.91
HORVU3Hr1G078810.1 Barley endoplasmic reticulum, golgi 49.81 49.43
AT3G56630.1 Thale cress endoplasmic reticulum 46.92 48.9
CDY32022 Canola endoplasmic reticulum 46.54 48.5
AT1G34540.1 Thale cress endoplasmic reticulum 46.35 48.39
CDY32023 Canola endoplasmic reticulum 46.15 48.0
CDX67652 Canola endoplasmic reticulum 46.15 48.0
CDX67653 Canola endoplasmic reticulum 45.77 47.6
CDX72120 Canola endoplasmic reticulum 44.81 47.07
Bra007259.1-P Field mustard endoplasmic reticulum 44.62 47.06
HORVU6Hr1G002700.1 Barley endoplasmic reticulum 45.96 46.68
CDY56777 Canola endoplasmic reticulum, extracellular 44.04 46.36
Bra003247.1-P Field mustard endoplasmic reticulum 44.42 46.2
HORVU5Hr1G098210.3 Barley mitochondrion 41.92 41.68
HORVU3Hr1G084450.1 Barley endoplasmic reticulum 40.58 40.58
HORVU3Hr1G108150.1 Barley endoplasmic reticulum 41.54 40.45
HORVU1Hr1G073700.1 Barley endoplasmic reticulum, plasma membrane, plastid 40.19 40.43
HORVU5Hr1G042030.1 Barley endoplasmic reticulum, vacuole 39.42 40.35
HORVU4Hr1G025180.1 Barley endoplasmic reticulum, vacuole 40.96 40.34
HORVU2Hr1G117080.3 Barley endoplasmic reticulum, extracellular 39.23 40.32
HORVU6Hr1G053810.2 Barley endoplasmic reticulum 40.38 39.92
HORVU2Hr1G117140.3 Barley endoplasmic reticulum 38.85 39.92
HORVU2Hr1G117150.1 Barley endoplasmic reticulum, plasma membrane 39.04 39.88
HORVU1Hr1G057220.1 Barley endoplasmic reticulum, extracellular 39.81 39.66
HORVU1Hr1G080680.1 Barley golgi, peroxisome, plastid 42.69 38.54
HORVU6Hr1G064170.1 Barley plasma membrane 37.88 36.15
HORVU3Hr1G085020.1 Barley endoplasmic reticulum, plasma membrane 38.27 36.12
HORVU1Hr1G042810.1 Barley mitochondrion 37.69 32.61
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A287JSG2InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872
GO:GO:0055114EnsemblPlantsGene:HORVU2Hr1G124430EnsemblPlants:HORVU2Hr1G124430.1InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24296PANTHER:PTHR24296:SF77SUPFAM:SSF48264SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI000B46DD4DSEG:seg:::
Description
No Description!
Coordinates
chrchr2H:-:758555788..758557838
Molecular Weight (calculated)
58042.6 Da
IEP (calculated)
8.749
GRAVY (calculated)
-0.191
Length
520 amino acids
Sequence
(BLAST)
001: XXIALAAFLL LLTLAAVFLL HAHAHVHTHA WRLRKAAAPY PLLGHLPQFL ANRHRILDWM TEVLARQPTC TLVFHRPGGE RGIITANPAN LEHAMRPGFH
101: NYPKGPRFTS ALHDFLGHGI LNVDGQAWRA QRKAASYEFN TRSLRLFVAR TVHGELHGRL LPLLRRAAAS GRTVDLQDAL ERYAFDNICR VAFDHDPRQL
201: PDEDDAATES TESSRFADAF RDAANLSAGR FRYAVPGLWK IKKALNMGSE RRLCESIAVV HGFADAIIRA RREEMGTGCE KHDLLSRFMA SELGLGERSH
301: TDADLRDAVI SFLLAGRETT SSALTWFFWL LSSRPDVVRR IRDEVAAVRA RRPGRGAGFD LDELREMHYV HAAITESMRL YPPVPVNSVQ ARAADVLPDG
401: TAVGAGWFVS YNAYAMGRME SVWGEDARAY RPERWLDTAE GTFRPESPFR YIVFHAGPRI CLGKEMAYIQ MKSVVACVVE ELELAVDGEY TPRQVASLTL
501: RMADGLPVRV KPFPTYVEGN
Best Arabidopsis Sequence Match ( AT1G34540.1 )
(BLAST)
001: MALLIFIFLL CFPISIFFIF FTKKSSSEFG FKSYPIVGSF PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKQQLIMTA NPSNVEYMLK TKFESFPKGQ
101: QFTSVLEDFL GHGIFNSDGD MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLVE AATTGKLIDL QDILERFAFD NICKLAFNVD CACLGHDGAV
201: GVNFMRAFET AATIISQRFR SVASCAWRIK KKLNIGSERV LRESIATVHK FADEIVRNRI DQGRSSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV EDKILQELNS IRARTGKRIG EVYGFEHLKM MNYLHAAITE SLRLYPPVPV DIKSCAEDNV LPDGTFVGKG WAITYNIFAM
401: GRMESIWGKD CDRFDPERWI DETNGCFRGE DPSKFPAFHA GPRMCVGKDM AYIQMKSIVA AVLERFVVEV PGKERPEILL SMTLRIKGGL FARVQERS
Arabidopsis Description
CYP94D1CYP94D1 [Source:UniProtKB/TrEMBL;Acc:A0A178WEM5]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.