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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:
  • plastid 3
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, plastid
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G286300.1 Wheat endoplasmic reticulum, plasma membrane 92.46 91.22
TraesCS1A01G277400.1 Wheat endoplasmic reticulum 92.07 90.15
TraesCS1D01G276600.1 Wheat endoplasmic reticulum, plasma membrane, plastid 91.68 90.11
Zm00001d038300_P002 Maize vacuole 64.99 84.42
Os05t0445100-01 Rice plasma membrane 84.53 84.2
EES19608 Sorghum plastid 84.72 81.87
HORVU3Hr1G084450.1 Barley endoplasmic reticulum 76.98 76.54
GSMUA_Achr3P22750_001 Banana endoplasmic reticulum, golgi, plastid 49.32 63.59
VIT_06s0080g00090.t01 Wine grape cytosol 53.38 62.02
GSMUA_Achr8P07690_001 Banana endoplasmic reticulum, plasma membrane 48.16 61.63
GSMUA_AchrUn_... Banana endoplasmic reticulum 43.71 60.11
VIT_13s0074g00790.t01 Wine grape cytosol 52.61 58.0
HORVU4Hr1G025180.1 Barley endoplasmic reticulum, vacuole 58.61 57.39
HORVU5Hr1G042030.1 Barley endoplasmic reticulum, vacuole 56.09 57.09
KRH25192 Soybean plastid 54.93 56.57
HORVU2Hr1G117080.3 Barley endoplasmic reticulum, extracellular 54.55 55.73
KRH30469 Soybean plastid 54.55 55.73
Solyc06g074420.1.1 Tomato endoplasmic reticulum 52.22 55.67
PGSC0003DMT400018331 Potato endoplasmic reticulum 52.61 55.62
HORVU2Hr1G117150.1 Barley endoplasmic reticulum, plasma membrane 54.74 55.6
HORVU2Hr1G117140.3 Barley endoplasmic reticulum 54.16 55.34
PGSC0003DMT400022922 Potato cytosol 39.27 55.16
CDY04506 Canola endoplasmic reticulum, extracellular 52.03 54.67
CDX71432 Canola endoplasmic reticulum, extracellular 52.03 54.56
PGSC0003DMT400023141 Potato endoplasmic reticulum, plasma membrane 52.22 54.44
AT2G27690.1 Thale cress endoplasmic reticulum 51.84 54.14
Bra012006.1-P Field mustard endoplasmic reticulum, extracellular 51.84 53.92
Solyc10g083400.1.1 Tomato endoplasmic reticulum 51.06 53.12
PGSC0003DMT400050139 Potato endoplasmic reticulum, plasma membrane 51.84 52.65
GSMUA_Achr8P33070_001 Banana endoplasmic reticulum, extracellular 43.13 51.86
KRH30881 Soybean endoplasmic reticulum, plasma membrane, plastid 51.45 50.96
VIT_08s0007g03660.t01 Wine grape endoplasmic reticulum, plasma membrane 53.19 50.09
KRH67891 Soybean endoplasmic reticulum, plasma membrane 52.03 49.81
HORVU2Hr1G124430.1 Barley endoplasmic reticulum 40.43 40.19
HORVU4Hr1G066870.1 Barley endoplasmic reticulum 40.62 39.62
HORVU4Hr1G066880.1 Barley endoplasmic reticulum 40.04 39.58
HORVU3Hr1G078760.1 Barley endoplasmic reticulum 39.46 39.31
HORVU3Hr1G078790.2 Barley endoplasmic reticulum, golgi 38.3 39.05
HORVU6Hr1G002700.1 Barley endoplasmic reticulum 37.33 37.7
HORVU3Hr1G078810.1 Barley endoplasmic reticulum, golgi 37.33 36.83
HORVU6Hr1G053810.2 Barley endoplasmic reticulum 36.56 35.93
HORVU1Hr1G080680.1 Barley golgi, peroxisome, plastid 39.85 35.76
HORVU3Hr1G108150.1 Barley endoplasmic reticulum 36.36 35.21
HORVU1Hr1G057220.1 Barley endoplasmic reticulum, extracellular 35.4 35.06
HORVU5Hr1G098210.3 Barley mitochondrion 35.2 34.8
HORVU6Hr1G064170.1 Barley plasma membrane 35.78 33.95
HORVU3Hr1G085020.1 Barley endoplasmic reticulum, plasma membrane 36.17 33.94
HORVU1Hr1G042810.1 Barley mitochondrion 35.98 30.95
Protein Annotations
Gene3D:1.10.630.10MapMan:11.7.3.3EMBL:AK354659EMBL:AK357621EMBL:AK362865InterPro:Cyt_P450
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfUniProt:F2CSQ7GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005506GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021
GO:GO:0016705GO:GO:0020037GO:GO:0055114EnsemblPlantsGene:HORVU1Hr1G073700EnsemblPlants:HORVU1Hr1G073700.1InterPro:IPR036396
PFAM:PF00067PRINTS:PR00385PRINTS:PR00463PANTHER:PTHR24296PANTHER:PTHR24296:SF21SUPFAM:SSF48264
TMHMM:TMhelixUniParc:UPI0002004D73SEG:seg:::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CSQ7]
Coordinates
chrchr1H:-:504325276..504327646
Molecular Weight (calculated)
56575.5 Da
IEP (calculated)
8.551
GRAVY (calculated)
0.103
Length
517 amino acids
Sequence
(BLAST)
001: MGAGAGHVAA HALASSLQPQ VAAVFFASAV CTLALAVLLA TMRLRPPWWC ACSVCEAYLT ASWTGEFDNL CDWFAHLLRR EPGRTVHVHV LGNVLTANPA
101: TVEHMLRGRF DNYPKGAPFS AILADFLGRG IFNVDGDPWL FQRKLAAAEL ASPAIRAFTA SVVSSELRCR LIPLLHSATA GQGGDKLLDL QDVFRRFAFD
201: CICKISFGLD PGCLELSLPM SAFANAFDTA SMLSARRATA PMHVLWKLKR LLNIGDEREL RDAIGLVDDL AAEVIRQRRK LRSATSGDDL LSRFMGSIND
301: DKYLRDIIVS FMLAGRDTVA SALTAFFLLL SDHPHVADAI RDEVFRVAGG RGEGHPTTAT SGELKRMHYV HAALFECMRL FPPVQFDSKF AAGEDTLPDG
401: TPVAKGTRVT YHAYAMGRME SVWGPDCAEF RPERWLRGGQ FVPESPYRYP VFQGGVRVCI GKELAIMEMK AAIVAVVQSF DIEAVGRSSR RPKFAAGLTA
501: TFVGGVPVRV RRRASQV
Best Arabidopsis Sequence Match ( AT2G27690.1 )
(BLAST)
001: MLLIISFTIV SFFFIIIFSL FHLLFLQKLR YCNCEICHAY LTSSWKKDFI NLSDWYTHLL RRSPTSTIKV HVLNSVITAN PSNVEHILKT NFHNYPKGKQ
101: FSVILGDLLG RGIFNSDGDT WRFQRKLASL ELGSVSVRVF AHEIVKTEIE TRLLPILTSF SDNPGSVLDL QDVFRRFSFD TISKLSFGFD PDCLRLPFPI
201: SEFAVAFDTA SLLSAKRALA PFPLLWKTKR LLRIGSEKKL QESINVINRL AGDLIKQRRL TGLMGKNDLI SRFMAVVAED DDEYLRDIVV SFLLAGRDTV
301: AAGLTGFFWL LTRHPEVENR IREELDRVMG TGFDSVTARC DEMREMDYLH ASLYESMRLF PPVQFDSKFA LNDDVLSDGT FVNSGTRVTY HAYAMGRMDR
401: IWGPDYEEFK PERWLDNEGK FRPENPVKYP VFQAGARVCI GKEMAIMEMK SIAVAIIRRF ETRVASPETT ETLRFAPGLT ATVNGGLPVM IQERS
Arabidopsis Description
CYP94C1Cytochrome P450 94C1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.