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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:mitochondrion, plastid, secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G362200.1 Wheat endoplasmic reticulum, golgi 94.67 93.57
TraesCS3A01G332200.1 Wheat endoplasmic reticulum 94.48 93.37
TraesCS3D01G325700.1 Wheat endoplasmic reticulum 94.87 88.75
HORVU3Hr1G078810.1 Barley endoplasmic reticulum, golgi 78.3 75.76
HORVU3Hr1G078760.1 Barley endoplasmic reticulum 70.41 68.79
HORVU6Hr1G002700.1 Barley endoplasmic reticulum 64.89 64.26
KRH66690 Soybean endoplasmic reticulum 52.66 54.27
Bra003246.1-P Field mustard cytosol 44.18 52.96
HORVU2Hr1G124430.1 Barley endoplasmic reticulum 52.66 51.35
HORVU4Hr1G066870.1 Barley endoplasmic reticulum 53.65 51.32
HORVU4Hr1G066880.1 Barley endoplasmic reticulum 52.47 50.86
VIT_08s0040g00820.t01 Wine grape endoplasmic reticulum 50.1 50.8
AT1G34540.1 Thale cress endoplasmic reticulum 49.31 50.2
AT3G56630.1 Thale cress endoplasmic reticulum 49.31 50.1
Solyc10g078280.2.1 Tomato endoplasmic reticulum, golgi 48.13 49.49
CDY32022 Canola endoplasmic reticulum 48.52 49.3
Bra007259.1-P Field mustard endoplasmic reticulum 47.73 49.09
CDX67652 Canola endoplasmic reticulum 48.32 49.0
CDY56777 Canola endoplasmic reticulum, extracellular 47.73 48.99
CDX72120 Canola endoplasmic reticulum 47.73 48.89
PGSC0003DMT400018545 Potato endoplasmic reticulum 47.73 48.69
CDY32023 Canola endoplasmic reticulum 47.73 48.4
CDX67653 Canola endoplasmic reticulum 47.34 48.0
Bra003247.1-P Field mustard endoplasmic reticulum 46.55 47.2
GSMUA_Achr9P21030_001 Banana endoplasmic reticulum, golgi 34.52 46.54
GSMUA_Achr11P... Banana extracellular, golgi 35.31 44.97
GSMUA_Achr7P17780_001 Banana endoplasmic reticulum, golgi 35.11 41.4
HORVU3Hr1G108150.1 Barley endoplasmic reticulum 41.62 39.51
HORVU5Hr1G098210.3 Barley mitochondrion 40.24 39.01
HORVU1Hr1G073700.1 Barley endoplasmic reticulum, plasma membrane, plastid 39.05 38.3
HORVU6Hr1G064170.1 Barley plasma membrane 40.83 37.98
HORVU3Hr1G084450.1 Barley endoplasmic reticulum 38.66 37.69
HORVU6Hr1G053810.2 Barley endoplasmic reticulum 38.46 37.07
HORVU1Hr1G057220.1 Barley endoplasmic reticulum, extracellular 38.07 36.97
HORVU2Hr1G117140.3 Barley endoplasmic reticulum 36.69 36.76
HORVU4Hr1G025180.1 Barley endoplasmic reticulum, vacuole 38.26 36.74
HORVU5Hr1G042030.1 Barley endoplasmic reticulum, vacuole 36.69 36.61
HORVU2Hr1G117080.3 Barley endoplasmic reticulum, extracellular 36.49 36.56
HORVU2Hr1G117150.1 Barley endoplasmic reticulum, plasma membrane 36.29 36.15
HORVU1Hr1G080680.1 Barley golgi, peroxisome, plastid 40.83 35.94
HORVU3Hr1G085020.1 Barley endoplasmic reticulum, plasma membrane 36.69 33.76
HORVU1Hr1G042810.1 Barley mitochondrion 39.05 32.95
GSMUA_Achr2P03460_001 Banana extracellular, golgi 41.62 26.34
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A287LTU5InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872
GO:GO:0055114EnsemblPlantsGene:HORVU3Hr1G078790EnsemblPlants:HORVU3Hr1G078790.2InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24296PANTHER:PTHR24296:SF31SUPFAM:SSF48264SignalP:SignalP-noTM
UniParc:UPI000B4707E7SEG:seg::::
Description
No Description!
Coordinates
chrchr3H:-:580244866..580246389
Molecular Weight (calculated)
57352.1 Da
IEP (calculated)
6.826
GRAVY (calculated)
-0.123
Length
507 amino acids
Sequence
(BLAST)
001: MELSLTSALL LLLLPLLCIL RLRRDTRRQP HADGLKAYPI IGTLPHFVKN QDCLVEWSAG VVARCPTHTM VFDFKSLGLV AGAITANPAN VEYIVKTNFQ
101: NYPKGEFVVS TMADFLGHGI FNSDGDQWLS QRKAASYEFS KRSLRNFIVS TVRFEVVERL LPLLSRAELE GLTLDMQDVL ERFAFDNICC VAFDEDPACL
201: TDDGLGVNGR AEFMHALDDA QIMVMARFMS PVKWAWRVKK LLNMGPERRM SKALATIHGY VDRIIRDRSE RGAAGLARKD DFLSRFVSSG EHSDESLRDV
301: VTSFIIAGRD TTSSALTWFF WLVSRRHEVE DKIVREICAV RASSGSADAA FNLDELREMH YLHAAVTESM RLYPPVAMDS RCCQHDDVLP DGTFVGKGWQ
401: VSYSAYAMAR LEEIWGEDCT EYRPERWLDE EGAFRPESSF KYPVFHAGPR MCLGKEMAYI QMKSIAACVL EKFSFQFVRG ESRPGLVFSV TLRMEGGLPM
501: QVKKRGH
Best Arabidopsis Sequence Match ( AT3G56630.1 )
(BLAST)
001: MEHFILISLL CFPIVIFFIF FPKNSSSEFG FKSYPIVGSL PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKLQFVMTA NPANVEYMLK TKFESFPKGE
101: RFISILEDFL GRGIFNSDGE MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLAE AATNGKLIDL QDILERFAFD NICKLAFNVD SACLGDDGAA
201: GVNFMQAFET AATIISQRFQ SVISYSWKIK KKLNIGSERV LRESIMIVHK FADEIVRNRI EQGKVSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV KDKILQELNS IRERTGKRIG EVYGFEDLKL MNYLHAAITE SLRLYPPVPV DTMSCAEDNV LPDGTFIGKD WGISYNAYAM
401: GRMESIWGKD CDRFDPERWI DETNGGFRGE NPYKFPAFHA GPRMCLGKEM AYIQMKSIVA AVLERFVVEV PGKKERPEIL MSVTLRIRGG LNVRVQERS
Arabidopsis Description
CYP94D2CYP94D2 [Source:UniProtKB/TrEMBL;Acc:A0A178V9L2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.