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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 5
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:nucleus, secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G064000.1 Wheat endoplasmic reticulum 95.22 95.59
TraesCS4D01G240900.1 Wheat endoplasmic reticulum 95.03 94.85
TraesCS4B01G241300.1 Wheat endoplasmic reticulum, golgi 65.01 92.14
HORVU4Hr1G066870.1 Barley endoplasmic reticulum 90.63 89.43
HORVU2Hr1G124430.1 Barley endoplasmic reticulum 79.35 79.81
Zm00001d028258_P001 Maize endoplasmic reticulum 77.82 78.42
EER92623 Sorghum endoplasmic reticulum 76.29 76.88
Zm00001d028278_P001 Maize endoplasmic reticulum 75.14 76.76
Os03t0223100-02 Rice endoplasmic reticulum, golgi 77.44 75.0
EER95239 Sorghum endoplasmic reticulum 74.19 74.9
EER95246 Sorghum cytosol 63.29 72.11
KRH66690 Soybean endoplasmic reticulum 52.77 56.1
VIT_08s0040g00820.t01 Wine grape endoplasmic reticulum 50.86 53.2
Bra003246.1-P Field mustard cytosol 42.64 52.72
HORVU3Hr1G078790.2 Barley endoplasmic reticulum, golgi 50.86 52.47
Solyc10g078280.2.1 Tomato endoplasmic reticulum, golgi 49.33 52.33
HORVU3Hr1G078760.1 Barley endoplasmic reticulum 51.63 52.02
PGSC0003DMT400018545 Potato endoplasmic reticulum 48.76 51.31
AT3G56630.1 Thale cress endoplasmic reticulum 48.37 50.7
CDY32022 Canola endoplasmic reticulum 48.18 50.5
CDY32023 Canola endoplasmic reticulum 48.18 50.4
CDX67653 Canola endoplasmic reticulum 47.99 50.2
CDX67652 Canola endoplasmic reticulum 47.8 50.0
HORVU3Hr1G078810.1 Barley endoplasmic reticulum, golgi 49.9 49.81
CDX72120 Canola endoplasmic reticulum 47.04 49.7
AT1G34540.1 Thale cress endoplasmic reticulum 47.23 49.6
Bra007259.1-P Field mustard endoplasmic reticulum 46.65 49.49
Bra003247.1-P Field mustard endoplasmic reticulum 46.65 48.8
CDY56777 Canola endoplasmic reticulum, extracellular 46.08 48.79
HORVU6Hr1G002700.1 Barley endoplasmic reticulum 46.65 47.66
HORVU3Hr1G108150.1 Barley endoplasmic reticulum 42.83 41.95
HORVU5Hr1G098210.3 Barley mitochondrion 41.87 41.87
HORVU3Hr1G084450.1 Barley endoplasmic reticulum 41.11 41.35
HORVU6Hr1G053810.2 Barley endoplasmic reticulum 40.34 40.11
HORVU1Hr1G073700.1 Barley endoplasmic reticulum, plasma membrane, plastid 39.58 40.04
HORVU4Hr1G025180.1 Barley endoplasmic reticulum, vacuole 40.34 39.96
HORVU5Hr1G042030.1 Barley endoplasmic reticulum, vacuole 38.24 39.37
HORVU2Hr1G117140.3 Barley endoplasmic reticulum 37.86 39.13
HORVU2Hr1G117080.3 Barley endoplasmic reticulum, extracellular 37.86 39.13
HORVU2Hr1G117150.1 Barley endoplasmic reticulum, plasma membrane 38.05 39.1
HORVU1Hr1G057220.1 Barley endoplasmic reticulum, extracellular 39.01 39.08
HORVU1Hr1G080680.1 Barley golgi, peroxisome, plastid 41.87 38.02
HORVU3Hr1G085020.1 Barley endoplasmic reticulum, plasma membrane 39.58 37.57
HORVU6Hr1G064170.1 Barley plasma membrane 38.24 36.7
HORVU1Hr1G042810.1 Barley mitochondrion 39.39 34.28
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A287PFI3InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872
GO:GO:0055114EnsemblPlantsGene:HORVU4Hr1G066880EnsemblPlants:HORVU4Hr1G066880.1InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24296PANTHER:PTHR24296:SF23SUPFAM:SSF48264SignalP:SignalP-TM
TMHMM:TMhelixUniParc:UPI000B47B353SEG:seg:::
Description
No Description!
Coordinates
chrchr4H:+:555982802..555985290
Molecular Weight (calculated)
58524.2 Da
IEP (calculated)
9.537
GRAVY (calculated)
-0.176
Length
523 amino acids
Sequence
(BLAST)
001: MAIALAAFLL IPLFSLGAAF VLRAWRLDKN AAAQRTPRTR PYPLLGHLPQ FLANRHRILD WLTEVLALQP TCTLVFRRPG GVRGVITANP TNLEHIMRAS
101: FDNYPKGPRF AALLHDFLGR GIFNADGEAW RSQRKAASYE FNTRSLRVFV AQSVHSELHG RLLPLLRRAA GSGRQLDLQD TLERYAFDNI CRVAFDHDPG
201: QLPDGGGGGG ARPEVESTAT ASSSFADAFR DAANLSAGRF QYAVPGFWII KKALNLGSER RLRDSIAMVH GFADRIIRSR REEMNMGCEK HDLLSRFMAS
301: QGESYTETAL RDVVISFLLA GRETTSSALT WFFWLLSSRP DVERRIRDEV AAVRARRATG DLGRAGFDLD ELREMHYVHA AITESMRLYP PVPVNFLRAE
401: AADVLPDGTA VGAGWFVAYN SYAMGRMESV WGEDARVYRP ERWLDPAEGT FRPDSPFRYI AFHAGPRICL GKEMAYIQMK SIVACVLEEF ELAVDGAYRP
501: QQVTSLTLRM ADGLPVRVKA RVN
Best Arabidopsis Sequence Match ( AT3G56630.1 )
(BLAST)
001: MEHFILISLL CFPIVIFFIF FPKNSSSEFG FKSYPIVGSL PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKLQFVMTA NPANVEYMLK TKFESFPKGE
101: RFISILEDFL GRGIFNSDGE MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLAE AATNGKLIDL QDILERFAFD NICKLAFNVD SACLGDDGAA
201: GVNFMQAFET AATIISQRFQ SVISYSWKIK KKLNIGSERV LRESIMIVHK FADEIVRNRI EQGKVSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV KDKILQELNS IRERTGKRIG EVYGFEDLKL MNYLHAAITE SLRLYPPVPV DTMSCAEDNV LPDGTFIGKD WGISYNAYAM
401: GRMESIWGKD CDRFDPERWI DETNGGFRGE NPYKFPAFHA GPRMCLGKEM AYIQMKSIVA AVLERFVVEV PGKKERPEIL MSVTLRIRGG LNVRVQERS
Arabidopsis Description
CYP94D2CYP94D2 [Source:UniProtKB/TrEMBL;Acc:A0A178V9L2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.