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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • endoplasmic reticulum 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:endoplasmic reticulum, plastid
MultiLoc:endoplasmic reticulum
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G117080.3 Barley endoplasmic reticulum, extracellular 97.63 97.63
TraesCS2D01G535800.1 Wheat mitochondrion 77.08 95.35
HORVU2Hr1G117150.1 Barley endoplasmic reticulum, plasma membrane 95.65 95.09
TraesCS2D01G535700.1 Wheat extracellular, plasma membrane 93.87 94.25
TraesCS2B01G563200.1 Wheat extracellular, plasma membrane 93.87 93.32
TraesCS2A01G533700.1 Wheat extracellular, plasma membrane 93.08 93.08
HORVU5Hr1G042030.1 Barley endoplasmic reticulum, vacuole 91.5 91.14
TraesCS2B01G563300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 92.89 90.73
Os12t0150200-01 Rice endoplasmic reticulum 78.85 78.39
Os11t0151400-01 Rice endoplasmic reticulum, golgi, plastid 79.25 77.12
EES16641 Sorghum endoplasmic reticulum 76.88 76.42
OQU82886 Sorghum endoplasmic reticulum, plasma membrane 76.09 75.64
Zm00001d023413_P001 Maize endoplasmic reticulum, extracellular 73.32 75.56
Zm00001d044703_P001 Maize endoplasmic reticulum, extracellular 73.91 75.1
Zm00001d023400_P002 Maize endoplasmic reticulum 75.49 75.05
Zm00001d052530_P001 Maize endoplasmic reticulum, golgi 59.68 74.57
HORVU4Hr1G025180.1 Barley endoplasmic reticulum, vacuole 77.47 74.24
GSMUA_Achr6P07480_001 Banana extracellular, golgi 49.01 65.78
GSMUA_Achr5P16800_001 Banana extracellular, golgi 54.94 64.5
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 49.41 63.78
GSMUA_Achr8P29660_001 Banana endoplasmic reticulum, plasma membrane 50.0 58.97
VIT_06s0080g00090.t01 Wine grape cytosol 51.38 58.43
VIT_13s0074g00790.t01 Wine grape cytosol 53.75 58.0
KRH30469 Soybean plastid 55.53 55.53
KRH25192 Soybean plastid 54.74 55.18
Solyc06g074420.1.1 Tomato endoplasmic reticulum 52.37 54.64
CDY04506 Canola endoplasmic reticulum, extracellular 52.77 54.27
HORVU1Hr1G073700.1 Barley endoplasmic reticulum, plasma membrane, plastid 55.34 54.16
HORVU3Hr1G084450.1 Barley endoplasmic reticulum 55.53 54.04
CDX71432 Canola endoplasmic reticulum, extracellular 52.57 53.96
AT2G27690.1 Thale cress endoplasmic reticulum 52.77 53.94
Bra012006.1-P Field mustard endoplasmic reticulum, extracellular 52.96 53.92
PGSC0003DMT400018331 Potato endoplasmic reticulum 51.98 53.78
PGSC0003DMT400023141 Potato endoplasmic reticulum, plasma membrane 52.57 53.63
PGSC0003DMT400022922 Potato cytosol 38.54 52.99
Solyc10g083400.1.1 Tomato endoplasmic reticulum 51.78 52.72
KRH30881 Soybean endoplasmic reticulum, plasma membrane, plastid 52.77 51.15
PGSC0003DMT400050139 Potato endoplasmic reticulum, plasma membrane 50.99 50.69
VIT_08s0007g03660.t01 Wine grape endoplasmic reticulum, plasma membrane 54.15 49.91
KRH67891 Soybean endoplasmic reticulum, plasma membrane 51.98 48.7
HORVU2Hr1G124430.1 Barley endoplasmic reticulum 39.92 38.85
HORVU4Hr1G066880.1 Barley endoplasmic reticulum 39.13 37.86
HORVU4Hr1G066870.1 Barley endoplasmic reticulum 39.33 37.55
HORVU3Hr1G078790.2 Barley endoplasmic reticulum, golgi 36.76 36.69
HORVU6Hr1G002700.1 Barley endoplasmic reticulum 36.56 36.13
HORVU3Hr1G078810.1 Barley endoplasmic reticulum, golgi 36.96 35.69
HORVU1Hr1G080680.1 Barley golgi, peroxisome, plastid 40.51 35.59
HORVU3Hr1G078760.1 Barley endoplasmic reticulum 35.97 35.07
HORVU5Hr1G098210.3 Barley mitochondrion 35.97 34.8
HORVU6Hr1G053810.2 Barley endoplasmic reticulum 35.77 34.41
HORVU1Hr1G057220.1 Barley endoplasmic reticulum, extracellular 35.38 34.29
HORVU3Hr1G085020.1 Barley endoplasmic reticulum, plasma membrane 36.17 33.21
HORVU3Hr1G108150.1 Barley endoplasmic reticulum 34.78 32.96
HORVU6Hr1G064170.1 Barley plasma membrane 35.38 32.84
HORVU1Hr1G042810.1 Barley mitochondrion 35.97 30.28
Protein Annotations
Gene3D:1.10.630.10MapMan:11.7.3.3UniProt:A0A287JKS7InterPro:Cyt_P450InterPro:Cyt_P450_sfGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016705
GO:GO:0020037GO:GO:0055114EnsemblPlantsGene:HORVU2Hr1G117140EnsemblPlants:HORVU2Hr1G117140.3InterPro:IPR036396PFAM:PF00067
PRINTS:PR00385PANTHER:PTHR24296PANTHER:PTHR24296:SF30SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI000B47CC6B
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:-:739489022..739491821
Molecular Weight (calculated)
55715.2 Da
IEP (calculated)
7.198
GRAVY (calculated)
0.066
Length
506 amino acids
Sequence
(BLAST)
001: MDDAMELSWG ARCAGLAFFT TSILSVALGA VLLLVRRWPN PWCGCHVCRA YLTGSWANDF TNLADWYAHL LRESPTGTVQ FHVLGCTVTA NPANVEYMLK
101: TRFDNFPKGK RFAALLGDLL GDGIFNVDGD AWRHQRKMAS LQLGSVTVRS YAYKIVAQEV ESRLLPVLVD AADKGKVVDL QDVFRRFAFD TICKISFGLD
201: PGCLDLDMPM SDLANAFDDA SRLCAMRGAA ASPLVWKVKR MLNIGSEREL KKAINLVDDL ASAMILQRRS LGFDNSHDLL SRFMASDVAM DDKYLRDIVV
301: SFLLAGRDTV ASALTTLFIH LYKNPEVTAA IRAEAGGDKP STYEHLMSLQ YTHAVLFENM RLFPPVQFDS KFCAAADVLP DGTYVEGESR VMYHPYAMGR
401: MPSIWGADYE AFRPDRWLTG PGGSFAPANL YKYPVFQAGL RVCLGKELAV IEMKAVGVAV VRAFDVEVVG ENGRSGWAPT FSPGLTASIS GGLPVRIKRA
501: STQTSF
Best Arabidopsis Sequence Match ( AT1G34540.1 )
(BLAST)
001: MALLIFIFLL CFPISIFFIF FTKKSSSEFG FKSYPIVGSF PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKQQLIMTA NPSNVEYMLK TKFESFPKGQ
101: QFTSVLEDFL GHGIFNSDGD MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLVE AATTGKLIDL QDILERFAFD NICKLAFNVD CACLGHDGAV
201: GVNFMRAFET AATIISQRFR SVASCAWRIK KKLNIGSERV LRESIATVHK FADEIVRNRI DQGRSSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV EDKILQELNS IRARTGKRIG EVYGFEHLKM MNYLHAAITE SLRLYPPVPV DIKSCAEDNV LPDGTFVGKG WAITYNIFAM
401: GRMESIWGKD CDRFDPERWI DETNGCFRGE DPSKFPAFHA GPRMCVGKDM AYIQMKSIVA AVLERFVVEV PGKERPEILL SMTLRIKGGL FARVQERS
Arabidopsis Description
CYP94D1CYP94D1 [Source:UniProtKB/TrEMBL;Acc:A0A178WEM5]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.