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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 8
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d044703_P001 Maize endoplasmic reticulum, extracellular 89.19 91.16
Zm00001d023400_P002 Maize endoplasmic reticulum 90.37 90.37
Zm00001d023413_P001 Maize endoplasmic reticulum, extracellular 87.03 90.22
OQU82886 Sorghum endoplasmic reticulum, plasma membrane 89.78 89.78
Os12t0150200-01 Rice endoplasmic reticulum 81.93 81.93
Os11t0151400-01 Rice endoplasmic reticulum, golgi, plastid 80.75 79.04
TraesCS5B01G128100.1 Wheat endoplasmic reticulum, vacuole 78.78 78.94
TraesCS5D01G137000.1 Wheat endoplasmic reticulum, vacuole 78.59 78.74
HORVU5Hr1G042030.1 Barley endoplasmic reticulum, vacuole 78.59 78.74
TraesCS5A01G129500.1 Wheat endoplasmic reticulum, vacuole 78.59 78.74
TraesCS2D01G535800.1 Wheat mitochondrion 62.67 78.0
TraesCS2D01G535700.1 Wheat extracellular, plasma membrane 77.21 77.98
TraesCS2A01G533500.1 Wheat endoplasmic reticulum, vacuole 77.01 77.62
TraesCS2A01G533700.1 Wheat extracellular, plasma membrane 77.01 77.47
HORVU2Hr1G117080.3 Barley endoplasmic reticulum, extracellular 76.62 77.08
HORVU2Hr1G117140.3 Barley endoplasmic reticulum 76.42 76.88
TraesCS2B01G563200.1 Wheat extracellular, plasma membrane 76.82 76.82
HORVU2Hr1G117150.1 Barley endoplasmic reticulum, plasma membrane 76.82 76.82
TraesCS2B01G563300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 77.41 76.06
GSMUA_Achr6P07480_001 Banana extracellular, golgi 49.12 66.31
GSMUA_Achr5P16800_001 Banana extracellular, golgi 55.8 65.89
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 49.12 63.78
VIT_06s0080g00090.t01 Wine grape cytosol 51.67 59.1
VIT_13s0074g00790.t01 Wine grape cytosol 53.83 58.42
GSMUA_Achr8P29660_001 Banana endoplasmic reticulum, plasma membrane 49.12 58.28
EES03915 Sorghum plastid 59.14 56.79
EES19608 Sorghum plastid 58.94 56.07
KRH30469 Soybean plastid 55.6 55.93
KRH25192 Soybean plastid 54.81 55.58
PGSC0003DMT400018331 Potato endoplasmic reticulum 52.46 54.6
Solyc06g074420.1.1 Tomato endoplasmic reticulum 51.67 54.23
AT2G27690.1 Thale cress endoplasmic reticulum 52.06 53.54
CDY04506 Canola endoplasmic reticulum, extracellular 51.67 53.46
CDX71432 Canola endoplasmic reticulum, extracellular 51.67 53.35
Bra012006.1-P Field mustard endoplasmic reticulum, extracellular 52.06 53.32
PGSC0003DMT400022922 Potato cytosol 38.51 53.26
Solyc10g083400.1.1 Tomato endoplasmic reticulum 51.87 53.12
PGSC0003DMT400023141 Potato endoplasmic reticulum, plasma membrane 50.88 52.22
PGSC0003DMT400050139 Potato endoplasmic reticulum, plasma membrane 51.28 51.28
KRH30881 Soybean endoplasmic reticulum, plasma membrane, plastid 51.08 49.81
VIT_08s0007g03660.t01 Wine grape endoplasmic reticulum, plasma membrane 53.05 49.18
KRH67891 Soybean endoplasmic reticulum, plasma membrane 52.06 49.07
KXG28317 Sorghum endoplasmic reticulum 42.24 41.11
EES18245 Sorghum endoplasmic reticulum, golgi 39.88 39.49
EES15562 Sorghum endoplasmic reticulum, golgi 41.26 38.39
OQU75917 Sorghum mitochondrion 35.95 38.36
EER92623 Sorghum endoplasmic reticulum 39.1 38.34
EER95239 Sorghum endoplasmic reticulum 38.7 38.03
EES07097 Sorghum golgi 38.51 36.57
EES04227 Sorghum endoplasmic reticulum, extracellular 38.51 36.36
OQU85673 Sorghum cytosol 34.58 35.63
EES18148 Sorghum endoplasmic reticulum, extracellular 36.54 35.5
EER95246 Sorghum cytosol 31.63 35.08
KXG38289 Sorghum plastid 36.54 33.94
OQU87885 Sorghum plastid 35.17 32.72
EES12648 Sorghum endoplasmic reticulum 34.58 32.71
Protein Annotations
Gene3D:1.10.630.10MapMan:11.7.3.3EntrezGene:8066963UniProt:C5YRR2InterPro:Cyt_P450InterPro:Cyt_P450_sf
EnsemblPlants:EES16641ProteinID:EES16641ProteinID:EES16641.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005506GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021
GO:GO:0016705GO:GO:0020037GO:GO:0055114InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PANTHER:PTHR24296PANTHER:PTHR24296:SF30EnsemblPlantsGene:SORBI_3008G036000SUPFAM:SSF48264unigene:Sbi.19516TMHMM:TMhelix
UniParc:UPI0001A88539RefSeq:XP_002442803.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr8:-:3340618..3342434
Molecular Weight (calculated)
55369.1 Da
IEP (calculated)
8.472
GRAVY (calculated)
0.148
Length
509 amino acids
Sequence
(BLAST)
001: MAAADAALPW AAQCAGMALF ASSSFLLVLA LVLLLLRRWP WCSCHVCRAY LTGSWARDFT NLGDWYAHLL RESPSGTVHV HVLGCTVTAN PANVEYMLKT
101: NFDNFPKGKT FAALLGDLLG GGIFNVDGHA WRHQRKMASL ELGSVAVRSY AFRIIAQEVE ARLMPVLAAA ADAGAVVDLQ DVFRRFAFDT ICKISFGLDP
201: GCLEKEMPVS KLADAFDTAT RLCAMRGAAA SPLLWKAKRL LNVGSERELR EAIKLVDELA AAMIRERRKL GVANSHDLLS RFMASAGDDA HHDDVDDKYL
301: RDIVVSFLLA GRDTVSSALT TLFMLLSKNP AVADAMRAEA GGSEAPLTYE QLKRLHYTHA VLYENMRLFP PVQFDSKFCA GPDVLPDGTY VSGGTRVMYH
401: PYAMGRMPRI WGADHGAFRP DRWLTGAGGS FVPESLYKYP VFQAGLRVCL GKELAITEMK AVAVAVVRAF DVQVVGDSGS AACAPKFVSG LTASISGGLP
501: VRISRRVRS
Best Arabidopsis Sequence Match ( AT2G27690.1 )
(BLAST)
001: MLLIISFTIV SFFFIIIFSL FHLLFLQKLR YCNCEICHAY LTSSWKKDFI NLSDWYTHLL RRSPTSTIKV HVLNSVITAN PSNVEHILKT NFHNYPKGKQ
101: FSVILGDLLG RGIFNSDGDT WRFQRKLASL ELGSVSVRVF AHEIVKTEIE TRLLPILTSF SDNPGSVLDL QDVFRRFSFD TISKLSFGFD PDCLRLPFPI
201: SEFAVAFDTA SLLSAKRALA PFPLLWKTKR LLRIGSEKKL QESINVINRL AGDLIKQRRL TGLMGKNDLI SRFMAVVAED DDEYLRDIVV SFLLAGRDTV
301: AAGLTGFFWL LTRHPEVENR IREELDRVMG TGFDSVTARC DEMREMDYLH ASLYESMRLF PPVQFDSKFA LNDDVLSDGT FVNSGTRVTY HAYAMGRMDR
401: IWGPDYEEFK PERWLDNEGK FRPENPVKYP VFQAGARVCI GKEMAIMEMK SIAVAIIRRF ETRVASPETT ETLRFAPGLT ATVNGGLPVM IQERS
Arabidopsis Description
CYP94C1Cytochrome P450 94C1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.