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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 1
  • peroxisome 1
  • extracellular 4
  • endoplasmic reticulum 8
  • vacuole 4
  • plasma membrane 4
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400022922 Potato cytosol 56.34 76.09
PGSC0003DMT400023141 Potato endoplasmic reticulum, plasma membrane 74.25 74.4
VIT_08s0007g03660.t01 Wine grape endoplasmic reticulum, plasma membrane 71.23 64.48
Solyc06g074420.1.1 Tomato endoplasmic reticulum 60.16 61.65
KRH67891 Soybean endoplasmic reticulum, plasma membrane 66.6 61.3
KRH30881 Soybean endoplasmic reticulum, plasma membrane, plastid 63.98 60.92
GSMUA_Achr5P16800_001 Banana extracellular, golgi 50.3 58.0
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 45.27 57.4
GSMUA_Achr6P07480_001 Banana extracellular, golgi 43.06 56.76
CDX71432 Canola endoplasmic reticulum, extracellular 56.14 56.59
AT2G27690.1 Thale cress endoplasmic reticulum 56.14 56.36
CDY04506 Canola endoplasmic reticulum, extracellular 55.73 56.3
GSMUA_Achr3P22750_001 Banana endoplasmic reticulum, golgi, plastid 45.27 56.11
GSMUA_AchrUn_... Banana endoplasmic reticulum 42.25 55.85
Bra012006.1-P Field mustard endoplasmic reticulum, extracellular 55.53 55.53
GSMUA_Achr8P29660_001 Banana endoplasmic reticulum, plasma membrane 47.69 55.24
TraesCS2D01G535800.1 Wheat mitochondrion 44.47 54.03
GSMUA_Achr8P07690_001 Banana endoplasmic reticulum, plasma membrane 43.66 53.71
Zm00001d023413_P001 Maize endoplasmic reticulum, extracellular 52.11 52.75
TraesCS5A01G129500.1 Wheat endoplasmic reticulum, vacuole 53.72 52.56
HORVU5Hr1G042030.1 Barley endoplasmic reticulum, vacuole 53.52 52.36
TraesCS5B01G128100.1 Wheat endoplasmic reticulum, vacuole 53.52 52.36
Zm00001d038300_P002 Maize vacuole 41.65 52.01
HORVU2Hr1G117080.3 Barley endoplasmic reticulum, extracellular 52.92 51.98
TraesCS5D01G137000.1 Wheat endoplasmic reticulum, vacuole 53.12 51.97
EES16641 Sorghum endoplasmic reticulum 53.12 51.87
TraesCS4B01G135200.1 Wheat endoplasmic reticulum 53.12 51.87
Os05t0445100-01 Rice plasma membrane 54.12 51.83
Zm00001d044703_P001 Maize endoplasmic reticulum, extracellular 51.91 51.81
HORVU2Hr1G117140.3 Barley endoplasmic reticulum 52.72 51.78
TraesCS2A01G533500.1 Wheat endoplasmic reticulum, vacuole 52.52 51.68
Os12t0150200-01 Rice endoplasmic reticulum 52.92 51.67
TraesCS4A01G183600.1 Wheat endoplasmic reticulum, golgi, plastid 52.92 51.67
TraesCS1D01G276600.1 Wheat endoplasmic reticulum, plasma membrane, plastid 54.53 51.52
HORVU2Hr1G117150.1 Barley endoplasmic reticulum, plasma membrane 52.72 51.47
TraesCS2A01G533700.1 Wheat extracellular, plasma membrane 52.31 51.38
Zm00001d052530_P001 Maize endoplasmic reticulum, golgi 41.85 51.36
TraesCS1B01G286300.1 Wheat endoplasmic reticulum, plasma membrane 54.12 51.34
TraesCS1A01G277400.1 Wheat endoplasmic reticulum 54.53 51.33
Zm00001d023400_P002 Maize endoplasmic reticulum 52.52 51.28
TraesCS2D01G535700.1 Wheat extracellular, plasma membrane 51.91 51.19
HORVU3Hr1G084450.1 Barley endoplasmic reticulum 53.52 51.15
HORVU1Hr1G073700.1 Barley endoplasmic reticulum, plasma membrane, plastid 53.12 51.06
TraesCS2B01G563200.1 Wheat extracellular, plasma membrane 52.11 50.88
TraesCS3A01G371200.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 53.72 50.86
EES19608 Sorghum plastid 54.73 50.84
EES03915 Sorghum plastid 54.12 50.75
TraesCS3B01G403400.1 Wheat peroxisome, plasma membrane, plastid 53.72 50.66
Os01t0858350-01 Rice endoplasmic reticulum 53.32 50.57
OQU82886 Sorghum endoplasmic reticulum, plasma membrane 51.71 50.49
TraesCS3D01G364300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 53.92 50.38
TraesCS2B01G563300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 52.31 50.19
HORVU4Hr1G025180.1 Barley endoplasmic reticulum, vacuole 53.12 50.0
Os11t0151400-01 Rice endoplasmic reticulum, golgi, plastid 52.11 49.81
GSMUA_Achr8P33070_001 Banana endoplasmic reticulum, extracellular 42.05 48.6
Solyc03g111280.1.1 Tomato endoplasmic reticulum 43.86 44.31
Solyc03g111300.1.1 Tomato endoplasmic reticulum 43.46 43.99
Solyc03g111290.1.1 Tomato endoplasmic reticulum 43.46 43.72
Solyc07g006890.1.1 Tomato nucleus 41.05 40.64
Solyc09g066150.1.1 Tomato plastid 40.64 40.24
Solyc10g078280.2.1 Tomato endoplasmic reticulum, golgi 39.84 40.16
Zm00001d012304_P001 Maize plasma membrane 43.46 40.0
Solyc02g094110.1.1 Tomato endoplasmic reticulum 40.85 39.57
Solyc11g065770.1.1 Tomato endoplasmic reticulum, golgi 38.23 36.26
Solyc01g094750.2.1 Tomato endoplasmic reticulum, golgi 34.21 32.32
Solyc06g076800.2.1 Tomato endoplasmic reticulum 33.0 31.48
Solyc02g014730.2.1 Tomato endoplasmic reticulum, golgi 35.01 31.24
Solyc08g081220.1.1 Tomato endoplasmic reticulum, extracellular 34.41 30.87
Protein Annotations
Gene3D:1.10.630.10MapMan:11.7.3.3InterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016705GO:GO:0020037GO:GO:0055114InterPro:IPR036396
UniProt:K4D3C7PFAM:PF00067PRINTS:PR00385PRINTS:PR00463PANTHER:PTHR24296PANTHER:PTHR24296:SF12
SUPFAM:SSF48264EnsemblPlantsGene:Solyc10g083400.1EnsemblPlants:Solyc10g083400.1.1TMHMM:TMhelixUniParc:UPI0002769DB0SEG:seg
Description
No Description!
Coordinates
chr10:-:63221579..63223072
Molecular Weight (calculated)
57562.0 Da
IEP (calculated)
9.018
GRAVY (calculated)
-0.029
Length
497 amino acids
Sequence
(BLAST)
001: MNHLDVFWWL KSFHVYSILI FIIISLFSLI FYMVRVKLWC NCEICHAYIT TSWSSQFINL CDWYTHLLKE SPTRTIHIHV LGNIITSNTQ NVEYMLKTRF
101: DNYPKGKTFS TILGDFLGRG IFNVDGDLWR FQKRMSSLEL GKVSIRSYAF EVVKNEIDKR LVPLLHEYKQ GGGVLDFQDV FRRFSFDCIC RFSFGLDPKC
201: LESSLPMSQF ALSFDLASKL SAKRAMTTSP IVWKIKRFFN IGSEKELREA IKVINILAQE VIRQKRKLAF SNHRDLLSRF MGSISDETYL RDIVISFLLA
301: GRDTIASALT SFFYVIGNNP QVAKAIREEA NRVLGPNEDL TSYEQMSELH YLQACVYESM RLYPPIQFDS KFCLEDDFLL DGTFVKKGTR VTYHPYAMGR
401: MEELWGCDAL EFKPQRWLKD GVFVQENPFK YPVFQAGLRV CLGKEMALVE VKSVALSLLR RFHVELAQPY HHNPRFSPGL TASFKGGLLV SVRQISS
Best Arabidopsis Sequence Match ( AT2G27690.1 )
(BLAST)
001: MLLIISFTIV SFFFIIIFSL FHLLFLQKLR YCNCEICHAY LTSSWKKDFI NLSDWYTHLL RRSPTSTIKV HVLNSVITAN PSNVEHILKT NFHNYPKGKQ
101: FSVILGDLLG RGIFNSDGDT WRFQRKLASL ELGSVSVRVF AHEIVKTEIE TRLLPILTSF SDNPGSVLDL QDVFRRFSFD TISKLSFGFD PDCLRLPFPI
201: SEFAVAFDTA SLLSAKRALA PFPLLWKTKR LLRIGSEKKL QESINVINRL AGDLIKQRRL TGLMGKNDLI SRFMAVVAED DDEYLRDIVV SFLLAGRDTV
301: AAGLTGFFWL LTRHPEVENR IREELDRVMG TGFDSVTARC DEMREMDYLH ASLYESMRLF PPVQFDSKFA LNDDVLSDGT FVNSGTRVTY HAYAMGRMDR
401: IWGPDYEEFK PERWLDNEGK FRPENPVKYP VFQAGARVCI GKEMAIMEMK SIAVAIIRRF ETRVASPETT ETLRFAPGLT ATVNGGLPVM IQERS
Arabidopsis Description
CYP94C1Cytochrome P450 94C1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.