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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 8
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • peroxisome 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:peroxisome, plastid, secretory
BaCelLo:secretory
EpiLoc:peroxisome
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g111280.1.1 Tomato endoplasmic reticulum 95.93 95.73
Solyc03g111290.1.1 Tomato endoplasmic reticulum 94.3 93.72
VIT_17s0000g01490.t01 Wine grape endoplasmic reticulum, golgi 64.97 62.3
KRH75826 Soybean plastid 62.12 60.52
KRH66027 Soybean endoplasmic reticulum 61.91 59.84
KRH66025 Soybean endoplasmic reticulum 61.91 59.84
AT3G48520.1 Thale cress endoplasmic reticulum 60.49 58.7
Bra018051.1-P Field mustard endoplasmic reticulum 59.27 57.51
CDY08079 Canola endoplasmic reticulum 59.27 57.51
Bra019551.1-P Field mustard endoplasmic reticulum 58.66 57.37
CDY59153 Canola endoplasmic reticulum 59.06 57.31
CDY37921 Canola endoplasmic reticulum 54.58 57.14
GSMUA_Achr6P27620_001 Banana endoplasmic reticulum 49.08 56.71
CDY16724 Canola endoplasmic reticulum, golgi 53.36 55.63
Bra029224.1-P Field mustard extracellular, golgi 57.84 55.47
Bra038632.1-P Field mustard endoplasmic reticulum, golgi 53.77 55.23
CDY71281 Canola endoplasmic reticulum, golgi 53.77 55.23
Bra035844.1-P Field mustard endoplasmic reticulum, golgi 52.95 55.2
CDY56885 Canola mitochondrion 31.57 54.77
CDY48144 Canola endoplasmic reticulum, golgi 52.75 54.64
CDX84409 Canola endoplasmic reticulum 53.16 54.6
Solyc02g094110.1.1 Tomato endoplasmic reticulum 56.82 54.39
Zm00001d004664_P001 Maize endoplasmic reticulum 56.62 53.98
GSMUA_Achr3P19530_001 Banana endoplasmic reticulum 50.1 53.36
KXG28317 Sorghum endoplasmic reticulum 56.82 53.35
AT3G01900.1 Thale cress endoplasmic reticulum 53.77 53.23
CDX77090 Canola endoplasmic reticulum, golgi 53.16 53.05
Zm00001d049201_P001 Maize endoplasmic reticulum 55.6 52.7
GSMUA_Achr8P28290_001 Banana plastid 49.9 52.58
Bra040552.1-P Field mustard endoplasmic reticulum, golgi 52.55 52.44
CDY70403 Canola endoplasmic reticulum, golgi 52.55 52.44
TraesCS1D01G359100.1 Wheat endoplasmic reticulum 54.79 50.66
TraesCS1A01G351600.1 Wheat endoplasmic reticulum 54.58 50.57
AT5G63450.2 Thale cress endoplasmic reticulum, plasma membrane, plastid 58.45 50.53
TraesCS1B01G371900.1 Wheat plastid 54.79 48.64
Os12t0443000-00 Rice endoplasmic reticulum, plasma membrane 51.73 48.02
HORVU1Hr1G080680.1 Barley golgi, peroxisome, plastid 54.99 46.88
Solyc07g006890.1.1 Tomato nucleus 47.45 46.41
Solyc06g074420.1.1 Tomato endoplasmic reticulum 45.01 45.57
Solyc09g066150.1.1 Tomato plastid 45.01 44.02
Solyc10g078280.2.1 Tomato endoplasmic reticulum, golgi 44.2 44.02
Solyc10g083400.1.1 Tomato endoplasmic reticulum 43.99 43.46
Solyc11g065770.1.1 Tomato endoplasmic reticulum, golgi 44.4 41.6
Solyc01g094750.2.1 Tomato endoplasmic reticulum, golgi 35.44 33.08
Solyc06g076800.2.1 Tomato endoplasmic reticulum 34.83 32.82
Solyc02g014730.2.1 Tomato endoplasmic reticulum, golgi 36.05 31.78
Solyc08g081220.1.1 Tomato endoplasmic reticulum, extracellular 35.64 31.59
Protein Annotations
Gene3D:1.10.630.10MapMan:11.7.3.4InterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IVInterPro:Cyt_P450_sfGO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152
GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396UniProt:K4BJZ3
PFAM:PF00067PRINTS:PR00385PRINTS:PR00465PANTHER:PTHR24296PANTHER:PTHR24296:SF5SUPFAM:SSF48264
SignalP:SignalP-noTMEnsemblPlantsGene:Solyc03g111300.1EnsemblPlants:Solyc03g111300.1.1UniParc:UPI0002768EF5SEG:seg:
Description
No Description!
Coordinates
chr3:+:61916638..61918113
Molecular Weight (calculated)
56059.1 Da
IEP (calculated)
8.204
GRAVY (calculated)
-0.168
Length
491 amino acids
Sequence
(BLAST)
001: MFLSLFLFFI LGFITHSLKL HLKFTPIYGP SSYPILGCLI SFYKNRHRLL DWYTQLLSES PTQTILVQRF GAPRTIITAN PDNVEYMLKT NFINYPKGKP
101: FTDILGDFLG RGIFNVDGEL WNAQRKLASH EFSTNSLREF VVKTLEEVVE NRLVPLLIQA ANSGKVLDLQ DVLRRFAFDT ICKVSLGTDP HCLDDLSHVP
201: VLVDSFDTAS RACAMRGMAP VYAIWKSKRA LNLGSEKKLK ENVKRVHCCI DEIIEEKKQK IATENGGDQM DLLSRLLLAG HDNEVVRDMV ISFLMAGRDT
301: TSSALTWLFW LTTNHRDVKD EMIKEITSIN NGDKALEFDE LKEMKHLAAC LNESMRLYPP VAWDSKHAAK DDILPDGTRV QKGNRVTYFP YGMGRMEEIW
401: GKDRLEFKPD RWIDENGGLK SVSPYEYPVF QAGPRVCLGK EMAFTQMKYV LASVLRRFEI KPVNVEKPVF LPLLTAHMVG GFNVRIYGRV E
Best Arabidopsis Sequence Match ( AT3G48520.1 )
(BLAST)
001: MAFLLSFLIL AFLITIIFFL SSSSTKKVQE NTTYGPPSYP LIGSILSFNK NRHRLLQWYT ELLRLSPSQT ILVPLLGNRR TIITTNPLNV EYILKTNFFN
101: FPKGKPFTDL LGDLLGGGIF NVDGHSWSSQ RKLASHEFST RSLRSFAFEV LKDEVENRLV PVLSTAADVG TTVDLQDVLK RFAFDVVCKV SLGWDPDCLD
201: LTRPVNPLVE AFDTAAEISA RRATEPIYAV WKTKRVLNVG SERKLREAIR TVHVLVSEIV RAKKKSLEIG TGAEAKQDLL SRFLAAGHNG EAVRDMVISF
301: IMAGRDTTSA AMTWLFWLLT ENDDVERKIL EEVDPLVSLG LGFEDLKEMA YTKACLCEAM RLYPPVSWDS KHAANDDVLP DGTRVKRGDK VTYFPYGMGR
401: METLWGTDSE EFNPNRWFDS EPGSTRPVLK PISPYKFPVF QAGPRVCVGK EMAFMQMKYV VGSVLSRFEI VPVNKDRPVF VPLLTAHMAG GLKVKIKRRS
501: HILNNV
Arabidopsis Description
CYP94B3CYP94B3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8H3]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.