Factsheet for Solyc07g006890.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 6
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400048249	Potato	endoplasmic reticulum, golgi	92.03	91.67
Solyc09g066150.1.1	Tomato	plastid	72.51	72.51
VIT_07s0141g00920.t01	Wine grape	endoplasmic reticulum, plasma membrane	66.73	66.21
VIT_07s0141g00890.t01	Wine grape	endoplasmic reticulum, plasma membrane	65.94	65.54
KRH67327	Soybean	endoplasmic reticulum, golgi	64.14	63.14
KRG95635	Soybean	endoplasmic reticulum, plasma membrane	63.94	62.7
KRH67328	Soybean	endoplasmic reticulum, golgi	63.74	61.9
KRH67326	Soybean	endoplasmic reticulum	62.15	61.3
Solyc11g065770.1.1	Tomato	endoplasmic reticulum, golgi	62.35	59.73
KRH19520	Soybean	endoplasmic reticulum	58.96	58.85
Solyc03g111300.1.1	Tomato	endoplasmic reticulum	46.41	47.45
Solyc03g111280.1.1	Tomato	endoplasmic reticulum	46.22	47.15
Solyc03g111290.1.1	Tomato	endoplasmic reticulum	46.02	46.76
Solyc10g078280.2.1	Tomato	endoplasmic reticulum, golgi	43.43	44.22
Solyc10g083400.1.1	Tomato	endoplasmic reticulum	40.64	41.05
Solyc02g094110.1.1	Tomato	endoplasmic reticulum	41.83	40.94
Solyc06g074420.1.1	Tomato	endoplasmic reticulum	38.45	39.79
Solyc01g094750.2.1	Tomato	endoplasmic reticulum, golgi	38.84	37.07
Solyc02g014730.2.1	Tomato	endoplasmic reticulum, golgi	39.64	35.73
Solyc06g076800.2.1	Tomato	endoplasmic reticulum	37.05	35.7
Solyc08g081220.1.1	Tomato	endoplasmic reticulum, extracellular	37.65	34.12

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705
GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	UniProt:K4CBG0	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	PANTHER:PTHR24296	PANTHER:PTHR24296:SF11	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc07g006890.1	EnsemblPlants:Solyc07g006890.1.1
TMHMM:TMhelix	UniParc:UPI000276C9BE	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:+:1747021..1748529

Molecular Weight (calculated)

57647.0 Da

IEP (calculated)

8.528

GRAVY (calculated)

-0.093

Length

502 amino acids

Sequence
(BLAST)

001: MTFIDLLLLF SLIPFFLIFF LKFQKARKNP ISSNTKIPKS YPIIGSYFSL LANQEQRIQW LSDIILSTPK LTFTLIRPLN FHTIITANPS NVQHILKTNF
101: SVYQKGQNSN NTLADFLSNG IFNVDGDIWK YQRQVASHEF NTRSLRKFVE SVVDVEVSER LVPILANAAA EKNVVDLQDV LQRFAFDNIC KIAFGYDPKY
201: LLPNLPEAEF AVAFEDCVRL SSERFAVPFP LIWKMKRAFG IGSEKKLRIA VGEVREFAKR IVREKLNERS SLDSADLLSR FLSTGHSDED FVVDIVISFI
301: LAGRDTTSAA LTWFFWLISK NADVESEILR EIGGKEEDVS MRYDEVKNMM YTHASLCESM RFYPPVPMDS KEVMKDDVLP DGTFVKKGMR VTYHPYAMGR
401: SEEIWGKDWA EFKPERWLNK DEMTGNWMFV GKDPFAYPVF QAGPRVCLGK EMAFLQMKRV VAGVLQRFKV VPVVEKGVEP MFISYLTAKM KGGFPVTIEE
501: RM

Best Arabidopsis Sequence Match ( AT3G01900.1 )
(BLAST)

001: MEASTFILLL VLVLLLVSAG KHVIYSCRNS TPKTYPVIGC LISFYTNRNR LLDWYTELLT ESPSRTVVIR RLAARRTVVT ANPSNVEYIL KTNFDNYPKG
101: KPFTEILGDF LGNGIFNVDG NLWLKQRRLA THDFTPKSLR EYVTVLRNEV EKELLAFLNA AAEDSQPFDL QELLRRFTFN IVCIVFLGID RCTLNPSSPV
201: SEFDRAFQTA SAVSAGRGSA PLSFVWKFKR LVGFGSEKEL RKAVGEVHNC VDEIIRDKKR KPANQDFLSR LIVAGESDET VRDMVISIIM AGRDTTSAVA
301: TRLFWLITGH EETEHDLVSE IRSVKEEITG GFDYESLKKL SLLKACLCEV MRLYPPVPWD SKHALTDDRL PDGTLVRAGD RVTYFPYGMG RMEELWGEDW
401: DEFKPNRWAE SYDKTCCRVL KKVNPFKFPV FQAGPRVCLG EEMAYVQMKY IVASILDRFE IEPIPTDKPD FVPMLTAHMA GGMQVRVHRR DPSLSP

Arabidopsis Description

CYP94B2CYP94B2 [Source:UniProtKB/TrEMBL;Acc:A0A178VKA7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.