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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400018545 Potato endoplasmic reticulum 93.51 92.76
VIT_08s0040g00820.t01 Wine grape endoplasmic reticulum 65.52 64.6
KRH66690 Soybean endoplasmic reticulum 60.85 60.98
Bra003246.1-P Field mustard cytosol 51.32 59.81
AT3G56630.1 Thale cress endoplasmic reticulum 59.03 58.32
CDY32023 Canola endoplasmic reticulum 58.62 57.8
CDY32022 Canola endoplasmic reticulum 58.42 57.72
CDX67653 Canola endoplasmic reticulum 58.42 57.6
CDX67652 Canola endoplasmic reticulum 58.22 57.4
Bra003247.1-P Field mustard endoplasmic reticulum 57.81 57.0
AT1G34540.1 Thale cress endoplasmic reticulum 56.8 56.22
CDX72120 Canola endoplasmic reticulum 56.19 55.96
CDY56777 Canola endoplasmic reticulum, extracellular 55.78 55.67
Bra007259.1-P Field mustard endoplasmic reticulum 55.38 55.38
TraesCS2A01G577800.1 Wheat endoplasmic reticulum 53.35 50.87
TraesCS2D01G589200.1 Wheat endoplasmic reticulum 53.55 50.77
Os01t0804400-01 Rice endoplasmic reticulum 52.54 50.68
TraesCS3A01G332000.1 Wheat cytosol 48.48 50.64
Zm00001d028278_P001 Maize endoplasmic reticulum 52.54 50.59
EER92623 Sorghum endoplasmic reticulum 52.74 50.1
Zm00001d028258_P001 Maize endoplasmic reticulum 52.74 50.1
TraesCS4A01G064000.1 Wheat endoplasmic reticulum 52.74 49.9
HORVU2Hr1G124430.1 Barley endoplasmic reticulum 52.54 49.81
TraesCS4B01G241100.1 Wheat endoplasmic reticulum 52.54 49.52
EER95239 Sorghum endoplasmic reticulum 51.93 49.42
HORVU4Hr1G066880.1 Barley endoplasmic reticulum 52.33 49.33
TraesCS4D01G240900.1 Wheat endoplasmic reticulum 52.33 49.24
TraesCS3B01G362400.1 Wheat endoplasmic reticulum 50.91 49.12
TraesCS4A01G063900.1 Wheat endoplasmic reticulum 51.72 49.04
GSMUA_Achr9P21030_001 Banana endoplasmic reticulum, golgi 37.32 48.94
TraesCS3D01G325500.1 Wheat endoplasmic reticulum 50.91 48.93
HORVU4Hr1G066870.1 Barley endoplasmic reticulum 52.54 48.87
Zm00001d045188_P001 Maize endoplasmic reticulum, golgi 51.93 48.76
TraesCS4D01G240800.1 Wheat endoplasmic reticulum, golgi 52.13 48.67
TraesCS5A01G005800.1 Wheat cytosol 32.86 48.65
TraesCS5B01G136100.1 Wheat endoplasmic reticulum 49.9 48.52
Os03t0223100-02 Rice endoplasmic reticulum, golgi 53.14 48.52
HORVU3Hr1G078760.1 Barley endoplasmic reticulum 50.71 48.17
TraesCS3A01G332200.1 Wheat endoplasmic reticulum 50.1 48.15
HORVU3Hr1G078790.2 Barley endoplasmic reticulum, golgi 49.49 48.13
EES18245 Sorghum endoplasmic reticulum, golgi 50.1 48.05
TraesCS3B01G362200.1 Wheat endoplasmic reticulum, golgi 49.49 47.56
TraesCS5D01G154600.1 Wheat endoplasmic reticulum 49.09 47.45
Os01t0803900-01 Rice mitochondrion 50.51 47.43
OQU75917 Sorghum mitochondrion 45.84 47.38
TraesCS5A01G137400.1 Wheat endoplasmic reticulum 49.49 47.38
Os12t0134900-01 Rice endoplasmic reticulum, extracellular 48.68 46.33
HORVU6Hr1G002700.1 Barley endoplasmic reticulum 48.07 46.29
TraesCS5D01G006800.1 Wheat endoplasmic reticulum, golgi 47.46 46.06
TraesCS3A01G332100.1 Wheat endoplasmic reticulum 47.87 46.0
HORVU3Hr1G078810.1 Barley endoplasmic reticulum, golgi 48.88 45.99
TraesCS4B01G241300.1 Wheat endoplasmic reticulum, golgi 34.28 45.8
TraesCS3D01G325700.1 Wheat endoplasmic reticulum 49.9 45.39
EES15562 Sorghum endoplasmic reticulum, golgi 50.3 45.34
EER95246 Sorghum cytosol 41.99 45.1
TraesCS2A01G015800.1 Wheat endoplasmic reticulum, golgi 47.06 44.87
TraesCS2D01G007600.1 Wheat mitochondrion 46.65 44.32
Solyc03g111280.1.1 Tomato endoplasmic reticulum 44.22 44.31
Solyc03g111300.1.1 Tomato endoplasmic reticulum 44.02 44.2
Solyc03g111290.1.1 Tomato endoplasmic reticulum 44.22 44.13
GSMUA_Achr11P... Banana extracellular, golgi 35.5 43.97
TraesCS3D01G325600.1 Wheat endoplasmic reticulum 47.67 43.84
Solyc07g006890.1.1 Tomato nucleus 44.22 43.43
Solyc09g066150.1.1 Tomato plastid 42.8 42.03
Solyc06g074420.1.1 Tomato endoplasmic reticulum 40.77 41.44
GSMUA_Achr7P17780_001 Banana endoplasmic reticulum, golgi 35.9 41.16
Solyc11g065770.1.1 Tomato endoplasmic reticulum, golgi 42.8 40.27
Solyc10g083400.1.1 Tomato endoplasmic reticulum 40.16 39.84
Solyc01g094750.2.1 Tomato endoplasmic reticulum, golgi 40.97 38.4
Solyc02g094110.1.1 Tomato endoplasmic reticulum 39.76 38.21
Solyc06g076800.2.1 Tomato endoplasmic reticulum 40.16 38.0
Solyc08g081220.1.1 Tomato endoplasmic reticulum, extracellular 41.58 37.0
Solyc02g014730.2.1 Tomato endoplasmic reticulum, golgi 40.77 36.09
GSMUA_Achr2P03460_001 Banana extracellular, golgi 39.96 24.59
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705
GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396UniProt:K4D270PFAM:PF00067
PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24296PANTHER:PTHR24296:SF31SUPFAM:SSF48264
EnsemblPlantsGene:Solyc10g078280.2EnsemblPlants:Solyc10g078280.2.1TMHMM:TMhelixUniParc:UPI000276A239SEG:seg:
Description
No Description!
Coordinates
chr10:+:60118910..60121328
Molecular Weight (calculated)
57383.2 Da
IEP (calculated)
6.521
GRAVY (calculated)
-0.252
Length
493 amino acids
Sequence
(BLAST)
001: MEFFSLIFTV LVSLFFFYYF NKNLQKKGFK IYPLVGALPG FLHNRHRFHD WMTDVLSNCP TNTAVFHRPV NVHGIMTANP LNVEHMLKTN FENFPKGFRF
101: YTRLQDLFGD GLFNVDGESW RTQRKSASYE FSTRSLRNFV METAQVEIHT RLIPILEEAS QRGRIIDIQD ILERFAFDNI IKLAFNVDAN CLGGAESEFM
201: QAFDIATTLS SGRFMYAIPF LYKIKKILNI GSEKKLQESI KVVHEFADNI INSRMEERDE KKDEDLLSRF MGDSNEVSAK FLRDIVISFI LAGRDTTSSA
301: LTWFFWILSS RKDIEQKILE ELVEVRGRNG KKIGEAYNFD ELREMQYLHA AISESMRLYP PVPIDTRSCL KDEILPDGTF IGKDWFISYQ TYSMGRMENL
401: WGKDCCEYKP ERWFDENGVY KQESPFKFPV FHAGPRMCLG KDMAYIQMKS IAASVLEMFE FDVQLENGKC PEYVLSLTLR MKGGLPVEVK ERC
Best Arabidopsis Sequence Match ( AT3G56630.1 )
(BLAST)
001: MEHFILISLL CFPIVIFFIF FPKNSSSEFG FKSYPIVGSL PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKLQFVMTA NPANVEYMLK TKFESFPKGE
101: RFISILEDFL GRGIFNSDGE MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLAE AATNGKLIDL QDILERFAFD NICKLAFNVD SACLGDDGAA
201: GVNFMQAFET AATIISQRFQ SVISYSWKIK KKLNIGSERV LRESIMIVHK FADEIVRNRI EQGKVSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV KDKILQELNS IRERTGKRIG EVYGFEDLKL MNYLHAAITE SLRLYPPVPV DTMSCAEDNV LPDGTFIGKD WGISYNAYAM
401: GRMESIWGKD CDRFDPERWI DETNGGFRGE NPYKFPAFHA GPRMCLGKEM AYIQMKSIVA AVLERFVVEV PGKKERPEIL MSVTLRIRGG LNVRVQERS
Arabidopsis Description
CYP94D2CYP94D2 [Source:UniProtKB/TrEMBL;Acc:A0A178V9L2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.