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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 1
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003246.1-P Field mustard cytosol 82.77 97.64
CDX67652 Canola endoplasmic reticulum 96.99 96.8
CDX67653 Canola endoplasmic reticulum 91.78 91.6
CDY32023 Canola endoplasmic reticulum 91.58 91.4
CDX72120 Canola endoplasmic reticulum 83.77 84.44
AT3G56630.1 Thale cress endoplasmic reticulum 84.37 84.37
CDY56777 Canola endoplasmic reticulum, extracellular 82.57 83.4
AT1G34540.1 Thale cress endoplasmic reticulum 81.76 81.93
KRH66690 Soybean endoplasmic reticulum 58.12 58.94
VIT_08s0040g00820.t01 Wine grape endoplasmic reticulum 58.92 58.8
Solyc10g078280.2.1 Tomato endoplasmic reticulum, golgi 57.72 58.42
PGSC0003DMT400018545 Potato endoplasmic reticulum 57.52 57.75
TraesCS5A01G005800.1 Wheat cytosol 34.27 51.35
TraesCS3A01G332000.1 Wheat cytosol 47.29 50.0
Zm00001d028278_P001 Maize endoplasmic reticulum 51.3 50.0
Os01t0804400-01 Rice endoplasmic reticulum 51.1 49.9
TraesCS3B01G362400.1 Wheat endoplasmic reticulum 50.9 49.71
TraesCS3D01G325500.1 Wheat endoplasmic reticulum 50.9 49.51
TraesCS4A01G063900.1 Wheat endoplasmic reticulum 51.5 49.42
EES18245 Sorghum endoplasmic reticulum, golgi 50.9 49.42
HORVU3Hr1G078760.1 Barley endoplasmic reticulum 51.1 49.13
TraesCS5B01G136100.1 Wheat endoplasmic reticulum 49.9 49.11
EER95239 Sorghum endoplasmic reticulum 50.9 49.03
Zm00001d045188_P001 Maize endoplasmic reticulum, golgi 51.5 48.95
TraesCS3A01G332100.1 Wheat endoplasmic reticulum 50.3 48.93
Zm00001d028258_P001 Maize endoplasmic reticulum 50.7 48.75
TraesCS3A01G332200.1 Wheat endoplasmic reticulum 50.1 48.73
OQU75917 Sorghum mitochondrion 46.49 48.64
TraesCS2A01G577800.1 Wheat endoplasmic reticulum 50.3 48.55
HORVU3Hr1G078790.2 Barley endoplasmic reticulum, golgi 49.3 48.52
EES15562 Sorghum endoplasmic reticulum, golgi 53.11 48.45
TraesCS4B01G241100.1 Wheat endoplasmic reticulum 50.7 48.37
TraesCS4A01G064000.1 Wheat endoplasmic reticulum 50.5 48.37
TraesCS4D01G240800.1 Wheat endoplasmic reticulum, golgi 51.1 48.3
TraesCS2D01G589200.1 Wheat endoplasmic reticulum 50.3 48.27
HORVU4Hr1G066880.1 Barley endoplasmic reticulum 50.5 48.18
EER92623 Sorghum endoplasmic reticulum 50.1 48.17
HORVU3Hr1G078810.1 Barley endoplasmic reticulum, golgi 50.5 48.09
TraesCS5D01G154600.1 Wheat endoplasmic reticulum 49.1 48.04
Os03t0223100-02 Rice endoplasmic reticulum, golgi 51.9 47.96
TraesCS5A01G137400.1 Wheat endoplasmic reticulum 49.5 47.96
TraesCS3B01G362200.1 Wheat endoplasmic reticulum, golgi 49.3 47.95
HORVU4Hr1G066870.1 Barley endoplasmic reticulum 50.9 47.92
TraesCS4D01G240900.1 Wheat endoplasmic reticulum 49.9 47.52
Os01t0803900-01 Rice mitochondrion 49.9 47.43
TraesCS2A01G015800.1 Wheat endoplasmic reticulum, golgi 49.1 47.39
GSMUA_Achr9P21030_001 Banana endoplasmic reticulum, golgi 35.67 47.34
TraesCS5D01G006800.1 Wheat endoplasmic reticulum, golgi 48.1 47.24
Os12t0134900-01 Rice endoplasmic reticulum, extracellular 48.9 47.1
TraesCS2D01G007600.1 Wheat mitochondrion 48.9 47.01
HORVU2Hr1G124430.1 Barley endoplasmic reticulum 48.5 46.54
HORVU6Hr1G002700.1 Barley endoplasmic reticulum 47.49 46.29
TraesCS3D01G325600.1 Wheat endoplasmic reticulum 49.7 46.27
TraesCS3D01G325700.1 Wheat endoplasmic reticulum 49.7 45.76
TraesCS4B01G241300.1 Wheat endoplasmic reticulum, golgi 33.47 45.26
EER95246 Sorghum cytosol 41.48 45.1
GSMUA_Achr11P... Banana extracellular, golgi 35.47 44.47
CDY37921 Canola endoplasmic reticulum 41.28 43.92
CDY16724 Canola endoplasmic reticulum, golgi 40.48 42.89
CDY08079 Canola endoplasmic reticulum 43.29 42.69
CDY59153 Canola endoplasmic reticulum 43.29 42.69
CDY70784 Canola cytosol 8.62 42.57
CDY48144 Canola endoplasmic reticulum, golgi 39.88 41.98
CDY56885 Canola mitochondrion 23.65 41.7
CDY71281 Canola endoplasmic reticulum, golgi 39.68 41.42
CDX84409 Canola endoplasmic reticulum 39.48 41.21
GSMUA_Achr7P17780_001 Banana endoplasmic reticulum, golgi 35.07 40.7
CDY04506 Canola endoplasmic reticulum, extracellular 39.68 40.24
CDY61020 Canola endoplasmic reticulum, extracellular 39.28 39.84
CDX71432 Canola endoplasmic reticulum, extracellular 39.28 39.76
CDX71150 Canola endoplasmic reticulum, extracellular 38.88 39.51
CDX77090 Canola endoplasmic reticulum, golgi 38.48 39.02
CDY70403 Canola endoplasmic reticulum, golgi 38.08 38.62
CDX74778 Canola endoplasmic reticulum 41.48 38.26
CDY02846 Canola endoplasmic reticulum, golgi 29.46 38.18
CDY38015 Canola endoplasmic reticulum 41.08 38.17
CDX90044 Canola extracellular, golgi 41.08 38.1
CDY18885 Canola endoplasmic reticulum 41.28 38.08
CDY02213 Canola plastid 42.08 37.77
CDY32676 Canola endoplasmic reticulum 30.06 37.69
CDY46948 Canola endoplasmic reticulum, golgi, plastid 41.88 37.66
CDY40805 Canola endoplasmic reticulum, golgi, plastid 35.87 37.29
CDY61911 Canola plastid 41.48 37.23
CDY15167 Canola endoplasmic reticulum, golgi 41.08 36.94
CDX84956 Canola endoplasmic reticulum 37.27 36.9
CDY66201 Canola endoplasmic reticulum 41.28 36.85
CDY07223 Canola endoplasmic reticulum 41.28 36.85
CDY27586 Canola endoplasmic reticulum 37.27 36.61
CDX98008 Canola endoplasmic reticulum 38.08 35.58
CDY34587 Canola endoplasmic reticulum, golgi, plasma membrane 36.67 35.53
CDY19394 Canola endoplasmic reticulum, golgi 37.47 35.48
CDY21086 Canola endoplasmic reticulum, golgi 28.86 34.62
CDY39170 Canola endoplasmic reticulum 36.87 34.33
CDY04194 Canola endoplasmic reticulum 36.87 34.33
GSMUA_Achr2P03460_001 Banana extracellular, golgi 41.08 25.59
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13GO:A0A078H3J3UniProt:A0A078H3J3EnsemblPlants:CDY32022ProteinID:CDY32022
ProteinID:CDY32022.1InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705GO:GO:0020037
GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00050861001InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24296PANTHER:PTHR24296:SF31SUPFAM:SSF48264TMHMM:TMhelix
UniParc:UPI0004EE5D9ESEG:seg::::
Description
BnaC06g16000DBnaC06g16000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3J3]
Coordinates
chrLK032284:+:322935..325985
Molecular Weight (calculated)
57003.9 Da
IEP (calculated)
8.444
GRAVY (calculated)
-0.118
Length
499 amino acids
Sequence
(BLAST)
001: MEFLIIILFI VSLPIFIFFI FPRQPSSHIG FKSYPIVGSI PGLVKNRHRF LDWTVETLSR CPTQTAVFRR PGNQQFVMTA NPANVEFMLK TKFDSFPKGE
101: RFISFLEDFL GRGIFNSDGE MWWKQRKTAS YEFSTRSLRD FVMTNVTVEI NTRLVPVLAA AATAGKPIDL QDILERFAFD NICKLAFNVD AACLGDDGAD
201: GVEFMKAFET AATIISKRFQ SVVSYSWKIK KKLDIGSEKV LRESIVTVHK FADDIVRHRT DDQARSSNTN EDLLSRFINI EEMSSPELLR DIVISFILAG
301: RDTTSSALSW FFWLLSKHPE VEDKIRQELN SIRARTGKRV GEVYGFEELK LMNYLHAAIT ESLRLYPPVP VDTMSSVEDN VLPDGTFVGK AWGISYNAYA
401: MGRMESIWGK GCDRFDPERW IDETNGGFRG ENPYKFPVFH AGPRMCLGKE MAYIQMKSIV AAVLDRFVVE VRVKERPEIL LSMTLRMKGG LFARIHERT
Best Arabidopsis Sequence Match ( AT3G56630.1 )
(BLAST)
001: MEHFILISLL CFPIVIFFIF FPKNSSSEFG FKSYPIVGSL PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKLQFVMTA NPANVEYMLK TKFESFPKGE
101: RFISILEDFL GRGIFNSDGE MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLAE AATNGKLIDL QDILERFAFD NICKLAFNVD SACLGDDGAA
201: GVNFMQAFET AATIISQRFQ SVISYSWKIK KKLNIGSERV LRESIMIVHK FADEIVRNRI EQGKVSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV KDKILQELNS IRERTGKRIG EVYGFEDLKL MNYLHAAITE SLRLYPPVPV DTMSCAEDNV LPDGTFIGKD WGISYNAYAM
401: GRMESIWGKD CDRFDPERWI DETNGGFRGE NPYKFPAFHA GPRMCLGKEM AYIQMKSIVA AVLERFVVEV PGKKERPEIL MSVTLRIRGG LNVRVQERS
Arabidopsis Description
CYP94D2CYP94D2 [Source:UniProtKB/TrEMBL;Acc:A0A178V9L2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.