Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G240900.1 | Wheat | endoplasmic reticulum | 94.04 | 66.22 |
| TraesCS4A01G064000.1 | Wheat | endoplasmic reticulum | 93.5 | 66.22 |
| HORVU4Hr1G066880.1 | Barley | endoplasmic reticulum | 92.14 | 65.01 |
| TraesCS4B01G241100.1 | Wheat | endoplasmic reticulum | 88.62 | 62.52 |
| Zm00001d028258_P001 | Maize | endoplasmic reticulum | 75.88 | 53.95 |
| EER92623 | Sorghum | endoplasmic reticulum | 73.44 | 52.22 |
| Zm00001d028278_P001 | Maize | endoplasmic reticulum | 71.82 | 51.76 |
| EER95239 | Sorghum | endoplasmic reticulum | 69.65 | 49.61 |
| Os03t0223100-02 | Rice | endoplasmic reticulum, golgi | 72.36 | 49.44 |
| EER95246 | Sorghum | cytosol | 57.18 | 45.97 |
| KRH66690 | Soybean | endoplasmic reticulum | 50.14 | 37.6 |
| TraesCS5B01G136100.1 | Wheat | endoplasmic reticulum | 47.7 | 34.71 |
| VIT_08s0040g00820.t01 | Wine grape | endoplasmic reticulum | 46.61 | 34.4 |
| Solyc10g078280.2.1 | Tomato | endoplasmic reticulum, golgi | 45.8 | 34.28 |
| TraesCS3B01G362400.1 | Wheat | endoplasmic reticulum | 47.15 | 34.05 |
| CDY32023 | Canola | endoplasmic reticulum | 45.53 | 33.6 |
| CDX67653 | Canola | endoplasmic reticulum | 45.53 | 33.6 |
| CDX72120 | Canola | endoplasmic reticulum | 44.99 | 33.54 |
| CDY32022 | Canola | endoplasmic reticulum | 45.26 | 33.47 |
| AT3G56630.1 | Thale cress | endoplasmic reticulum | 44.99 | 33.27 |
| Bra007259.1-P | Field mustard | endoplasmic reticulum | 44.44 | 33.27 |
| CDX67652 | Canola | endoplasmic reticulum | 44.99 | 33.2 |
| PGSC0003DMT400018545 | Potato | endoplasmic reticulum | 44.72 | 33.2 |
| Bra003247.1-P | Field mustard | endoplasmic reticulum | 44.44 | 32.8 |
| CDY56777 | Canola | endoplasmic reticulum, extracellular | 43.9 | 32.79 |
| Bra003246.1-P | Field mustard | cytosol | 37.4 | 32.62 |
| AT1G34540.1 | Thale cress | endoplasmic reticulum | 43.9 | 32.53 |
| TraesCS3B01G362200.1 | Wheat | endoplasmic reticulum, golgi | 44.17 | 31.77 |
| TraesCS3B01G546300.1 | Wheat | endoplasmic reticulum | 39.02 | 26.97 |
| TraesCS4B01G135200.1 | Wheat | endoplasmic reticulum | 36.59 | 26.52 |
| TraesCS1B01G286300.1 | Wheat | endoplasmic reticulum, plasma membrane | 36.59 | 25.76 |
| TraesCS1B01G371900.1 | Wheat | plastid | 37.94 | 25.32 |
| TraesCS3B01G403400.1 | Wheat | peroxisome, plasma membrane, plastid | 36.04 | 25.24 |
| TraesCS5B01G128100.1 | Wheat | endoplasmic reticulum, vacuole | 34.69 | 25.2 |
| TraesCS2B01G425400.1 | Wheat | golgi | 36.04 | 24.91 |
| TraesCS6B01G239400.1 | Wheat | mitochondrion | 36.86 | 24.73 |
| TraesCS2B01G563200.1 | Wheat | extracellular, plasma membrane | 33.88 | 24.56 |
| TraesCS3B01G399900.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 36.31 | 24.36 |
| TraesCS1B01G177900.1 | Wheat | peroxisome, plastid | 36.04 | 24.18 |
| TraesCS1B01G251600.1 | Wheat | golgi, peroxisome, plastid | 36.59 | 23.98 |
| TraesCS2B01G563300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 33.6 | 23.94 |
| TraesCS6B01G279400.1 | Wheat | endoplasmic reticulum | 34.96 | 23.84 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G241300.1 | EnsemblPlantsGene:TraesCS4B01G241300 | Gene3D:1.10.630.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0055114 |
| InterPro:Cyt_P450 | InterPro:Cyt_P450_sf | InterPro:IPR036396 | PANTHER:PTHR24296 | PANTHER:PTHR24296:SF77 | PFAM:PF00067 |
| SEG:seg | SUPFAM:SSF48264 | TMHMM:TMhelix | MapMan:50.1.13 | : | : |
Description
No Description!
Coordinates
chr4B:+:500079147..500080256
Molecular Weight (calculated)
41322.5 Da
IEP (calculated)
10.363
GRAVY (calculated)
-0.175
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIALAAFLL IPLFSLGAVF VLRAWRLDKK APAQRTPRTR PYPLLGHLPQ FLANRHRVLD WLTEVLALLP TCTLVFRRPG GVRGVITANP TNLEHIMRAS
101: FDNYPKGPRF AALLHDFLGR GIFNADGEAW RAQRKAASYE FNTRSLRLFV ARSVHSELHG RFLPLLRRAA GSGSQLNLQD TLERYAFDNI CRVAFDHDPR
201: QLPDGDDSAG PEVESTATAS SSFADAFRDA ANLSAGRFQY AVPGFWMIKK ALNLGSERRL RESIAMVHGF ADRIIRSRRE EMSMGCEKHD LLSRFMANQG
301: ESYTETALRD VVISFLLAGR ETTSSALTWF FWLLSSRPDV ERRIRDEVAA VRAAERSAIT AEPGSISTS
101: FDNYPKGPRF AALLHDFLGR GIFNADGEAW RAQRKAASYE FNTRSLRLFV ARSVHSELHG RFLPLLRRAA GSGSQLNLQD TLERYAFDNI CRVAFDHDPR
201: QLPDGDDSAG PEVESTATAS SSFADAFRDA ANLSAGRFQY AVPGFWMIKK ALNLGSERRL RESIAMVHGF ADRIIRSRRE EMSMGCEKHD LLSRFMANQG
301: ESYTETALRD VVISFLLAGR ETTSSALTWF FWLLSSRPDV ERRIRDEVAA VRAAERSAIT AEPGSISTS
001: MALLIFIFLL CFPISIFFIF FTKKSSSEFG FKSYPIVGSF PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKQQLIMTA NPSNVEYMLK TKFESFPKGQ
101: QFTSVLEDFL GHGIFNSDGD MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLVE AATTGKLIDL QDILERFAFD NICKLAFNVD CACLGHDGAV
201: GVNFMRAFET AATIISQRFR SVASCAWRIK KKLNIGSERV LRESIATVHK FADEIVRNRI DQGRSSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV EDKILQELNS IRARTGKRIG EVYGFEHLKM MNYLHAAITE SLRLYPPVPV DIKSCAEDNV LPDGTFVGKG WAITYNIFAM
401: GRMESIWGKD CDRFDPERWI DETNGCFRGE DPSKFPAFHA GPRMCVGKDM AYIQMKSIVA AVLERFVVEV PGKERPEILL SMTLRIKGGL FARVQERS
101: QFTSVLEDFL GHGIFNSDGD MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLVE AATTGKLIDL QDILERFAFD NICKLAFNVD CACLGHDGAV
201: GVNFMRAFET AATIISQRFR SVASCAWRIK KKLNIGSERV LRESIATVHK FADEIVRNRI DQGRSSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV EDKILQELNS IRARTGKRIG EVYGFEHLKM MNYLHAAITE SLRLYPPVPV DIKSCAEDNV LPDGTFVGKG WAITYNIFAM
401: GRMESIWGKD CDRFDPERWI DETNGCFRGE DPSKFPAFHA GPRMCVGKDM AYIQMKSIVA AVLERFVVEV PGKERPEILL SMTLRIKGGL FARVQERS
Arabidopsis Description
CYP94D1CYP94D1 [Source:UniProtKB/TrEMBL;Acc:A0A178WEM5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.