Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G227200.1 | Wheat | endoplasmic reticulum | 98.52 | 98.52 |
| TraesCS6A01G244900.1 | Wheat | endoplasmic reticulum, mitochondrion | 98.52 | 98.34 |
| HORVU6Hr1G064170.1 | Barley | plasma membrane | 97.23 | 96.51 |
| Os02t0666500-01 | Rice | endoplasmic reticulum | 90.02 | 91.54 |
| OQU85673 | Sorghum | cytosol | 81.52 | 89.27 |
| Zm00001d017528_P001 | Maize | endoplasmic reticulum | 87.99 | 89.14 |
| TraesCS2B01G425400.1 | Wheat | golgi | 86.88 | 88.02 |
| GSMUA_Achr5P12420_001 | Banana | endoplasmic reticulum | 65.8 | 75.58 |
| GSMUA_Achr5P19450_001 | Banana | endoplasmic reticulum | 66.17 | 75.53 |
| GSMUA_Achr4P26290_001 | Banana | endoplasmic reticulum, extracellular | 73.01 | 74.39 |
| KRH59920 | Soybean | endoplasmic reticulum, plasma membrane | 68.39 | 70.08 |
| PGSC0003DMT400097242 | Potato | cytosol | 62.66 | 69.61 |
| KRH64976 | Soybean | endoplasmic reticulum | 68.58 | 69.61 |
| Solyc01g094750.2.1 | Tomato | endoplasmic reticulum, golgi | 66.91 | 68.82 |
| KRH48115 | Soybean | endoplasmic reticulum | 67.65 | 68.8 |
| KRH41201 | Soybean | endoplasmic reticulum, plasma membrane | 61.55 | 68.52 |
| VIT_02s0025g03320.t01 | Wine grape | endoplasmic reticulum, golgi | 68.39 | 68.27 |
| CDX90044 | Canola | extracellular, golgi | 67.47 | 67.84 |
| Bra032642.1-P | Field mustard | endoplasmic reticulum, golgi | 66.54 | 67.16 |
| AT4G00360.1 | Thale cress | endoplasmic reticulum | 68.58 | 67.09 |
| CDY38015 | Canola | endoplasmic reticulum | 66.54 | 67.04 |
| AT2G45970.1 | Thale cress | endoplasmic reticulum, golgi | 66.36 | 66.85 |
| AT1G01600.1 | Thale cress | endoplasmic reticulum | 68.02 | 66.43 |
| CDY15167 | Canola | endoplasmic reticulum, golgi | 68.02 | 66.31 |
| Bra008519.1-P | Field mustard | endoplasmic reticulum | 67.84 | 66.13 |
| Bra033251.1-P | Field mustard | endoplasmic reticulum, golgi | 67.65 | 65.95 |
| VIT_15s0046g02380.t01 | Wine grape | endoplasmic reticulum, golgi | 68.95 | 65.9 |
| Bra004951.1-P | Field mustard | endoplasmic reticulum | 65.43 | 65.8 |
| CDY66201 | Canola | endoplasmic reticulum | 67.84 | 65.65 |
| CDX74778 | Canola | endoplasmic reticulum | 65.43 | 65.43 |
| CDY18885 | Canola | endoplasmic reticulum | 65.43 | 65.43 |
| AT1G63710.1 | Thale cress | endoplasmic reticulum, golgi | 63.22 | 65.39 |
| Bra037336.1-P | Field mustard | endoplasmic reticulum | 67.47 | 65.3 |
| CDY07223 | Canola | endoplasmic reticulum | 67.47 | 65.3 |
| PGSC0003DMT400031804 | Potato | endoplasmic reticulum, extracellular | 65.8 | 64.26 |
| Solyc08g081220.1.1 | Tomato | endoplasmic reticulum, extracellular | 65.62 | 64.08 |
| TraesCS3B01G399900.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 62.85 | 61.82 |
| TraesCS1B01G177900.1 | Wheat | peroxisome, plastid | 46.03 | 45.27 |
| TraesCS3B01G362400.1 | Wheat | endoplasmic reticulum | 39.56 | 41.88 |
| TraesCS3B01G362200.1 | Wheat | endoplasmic reticulum, golgi | 38.08 | 40.16 |
| TraesCS5B01G136100.1 | Wheat | endoplasmic reticulum | 37.52 | 40.04 |
| TraesCS4B01G241100.1 | Wheat | endoplasmic reticulum | 38.26 | 39.58 |
| TraesCS6B01G239400.1 | Wheat | mitochondrion | 39.93 | 39.27 |
| TraesCS4B01G135200.1 | Wheat | endoplasmic reticulum | 35.12 | 37.33 |
| TraesCS3B01G403400.1 | Wheat | peroxisome, plasma membrane, plastid | 35.49 | 36.43 |
| TraesCS2B01G563200.1 | Wheat | extracellular, plasma membrane | 33.83 | 35.95 |
| TraesCS5B01G128100.1 | Wheat | endoplasmic reticulum, vacuole | 33.46 | 35.63 |
| TraesCS4B01G241300.1 | Wheat | endoplasmic reticulum, golgi | 23.84 | 34.96 |
| TraesCS1B01G286300.1 | Wheat | endoplasmic reticulum, plasma membrane | 33.83 | 34.92 |
| TraesCS2B01G563300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 32.72 | 34.17 |
| TraesCS1B01G371900.1 | Wheat | plastid | 34.57 | 33.82 |
| TraesCS3B01G546300.1 | Wheat | endoplasmic reticulum | 32.35 | 32.77 |
| TraesCS1B01G251600.1 | Wheat | golgi, peroxisome, plastid | 32.72 | 31.44 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:21.9.1.1 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016705 | GO:GO:0020037 | GO:GO:0055114 | InterPro:IPR036396 | PFAM:PF00067 | PRINTS:PR00385 |
| PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24296 | PANTHER:PTHR24296:SF78 | SUPFAM:SSF48264 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS6B01G279400 | EnsemblPlants:TraesCS6B01G279400.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6B:-:505681567..505683192
Molecular Weight (calculated)
59914.0 Da
IEP (calculated)
7.917
GRAVY (calculated)
-0.071
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVGTWAVVV SAVAAYMAWF WRMSRGLRGP RVWPVLGSLP GLVQHAEDMH EWIAGNLRRA GGTYQTCIFA VPGVARRGGL VTVTCDPRNL EHVLKARFDN
101: YPKGPFWHGV FQDLLGDGIF NSDGDTWLAQ RKTAALEFTT RTLRTAMSRW VSRSIHGRLL PILADAAKGK AHVDLQDLLL RLTFDNICGL AFGKDPETLA
201: QGLPENEFAS AFDRATEATL NRFIFPECLW RCKKWLSLGM ETTLTSSMAH VDQYLAAVIK KRKLELAAGN GKCDTAATHD DLLSRFMRKG SYSDESLQHV
301: ALNFILAGRD TSSVALSWFF WLVSTHPAVE RKIVRELCSV LAASRGAHDP ALWLAEPFTF EELDRLVYLK AALSETLRLY PSVPEDSKHV VADDYLPDGT
401: FVPAGSSVTY SIYSAGRMKA VWGEDCLEFR PERWLSADGT KFEQHDSYKF VAFNAGPRVC LGKDLAYLQM KNIAGSVLLR HRLSVAPGHR VEQKMSLTLF
501: MKDGLRMEVR PRDLAPILDE PCGLDAGAAT AAAASATAPC A
101: YPKGPFWHGV FQDLLGDGIF NSDGDTWLAQ RKTAALEFTT RTLRTAMSRW VSRSIHGRLL PILADAAKGK AHVDLQDLLL RLTFDNICGL AFGKDPETLA
201: QGLPENEFAS AFDRATEATL NRFIFPECLW RCKKWLSLGM ETTLTSSMAH VDQYLAAVIK KRKLELAAGN GKCDTAATHD DLLSRFMRKG SYSDESLQHV
301: ALNFILAGRD TSSVALSWFF WLVSTHPAVE RKIVRELCSV LAASRGAHDP ALWLAEPFTF EELDRLVYLK AALSETLRLY PSVPEDSKHV VADDYLPDGT
401: FVPAGSSVTY SIYSAGRMKA VWGEDCLEFR PERWLSADGT KFEQHDSYKF VAFNAGPRVC LGKDLAYLQM KNIAGSVLLR HRLSVAPGHR VEQKMSLTLF
501: MKDGLRMEVR PRDLAPILDE PCGLDAGAAT AAAASATAPC A
001: MEISNAMLLV AIVTGYWLWF KRISRWLKGP RVWPLLGSLP GLIEQRDRMH EWITENLRAC GGTYQTCIFA VPFLAKKQGL VTVTCDPKNL EHMLKTRFDN
101: YPKGPTWQSV FHDLLGQGIF NSDGDTWLFQ RKTAALEFTT RTLRQAMGRW VNRGIKLRFC PILATAQDNA EPVDLQDLIL RLTFDNICGL AFGKDTRTCA
201: PGLPENGFAS AFDRATEASL QRFIIPKFMW KLKKWLGLGL EVSLSRSLGE IDEYLAAVIN TRKQELMSQQ ESGTHQRHDD LLSRFMMKKT ESYSDTFLQH
301: VALNFILAGR DTSSVALSWF FWLITMHPTV EDKIVREICS VLIETRGTDD VASWTEEPLG FDEIDRLVYL KAAISETLRL YPSVPEDSKH VENDDVLPDG
401: TFVPAGSSVT YSIYAAGRMK STWGEDCLEF NPERWISPID GKFINHDQYR FVAFNAGPRI CLGKDLAYLQ MKTIAAAVLL RHRLTVVPGH KVEQKMSLTL
501: FMKNGLLVNL YKRDLQGIIK SLVVKKSDGV SNGQCNGVIG EGVAVYLNTG VAVV
101: YPKGPTWQSV FHDLLGQGIF NSDGDTWLFQ RKTAALEFTT RTLRQAMGRW VNRGIKLRFC PILATAQDNA EPVDLQDLIL RLTFDNICGL AFGKDTRTCA
201: PGLPENGFAS AFDRATEASL QRFIIPKFMW KLKKWLGLGL EVSLSRSLGE IDEYLAAVIN TRKQELMSQQ ESGTHQRHDD LLSRFMMKKT ESYSDTFLQH
301: VALNFILAGR DTSSVALSWF FWLITMHPTV EDKIVREICS VLIETRGTDD VASWTEEPLG FDEIDRLVYL KAAISETLRL YPSVPEDSKH VENDDVLPDG
401: TFVPAGSSVT YSIYAAGRMK STWGEDCLEF NPERWISPID GKFINHDQYR FVAFNAGPRI CLGKDLAYLQ MKTIAAAVLL RHRLTVVPGH KVEQKMSLTL
501: FMKNGLLVNL YKRDLQGIIK SLVVKKSDGV SNGQCNGVIG EGVAVYLNTG VAVV
Arabidopsis Description
CYP86A4Cytochrome P450 86A4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMM1]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.