Factsheet for Bra032642.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

cytosol 1
plastid 2
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38015	Canola	endoplasmic reticulum	97.76	97.58
Bra033251.1-P	Field mustard	endoplasmic reticulum, golgi	93.47	90.27
AT1G01600.1	Thale cress	endoplasmic reticulum	90.86	87.91
Bra008519.1-P	Field mustard	endoplasmic reticulum	85.45	82.52
Bra037336.1-P	Field mustard	endoplasmic reticulum	85.26	81.75
PGSC0003DMT400097242	Potato	cytosol	69.22	76.18
Solyc01g094750.2.1	Tomato	endoplasmic reticulum, golgi	74.07	75.48
Bra004951.1-P	Field mustard	endoplasmic reticulum	74.25	73.98
KRH64976	Soybean	endoplasmic reticulum	73.51	73.92
KRH48115	Soybean	endoplasmic reticulum	73.13	73.68
VIT_15s0046g02380.t01	Wine grape	endoplasmic reticulum, golgi	75.0	71.02
Zm00001d017528_P001	Maize	endoplasmic reticulum	68.66	68.91
TraesCS2A01G407500.1	Wheat	endoplasmic reticulum	67.35	68.24
OQU85673	Sorghum	cytosol	62.87	68.22
GSMUA_Achr4P26290_001	Banana	endoplasmic reticulum, extracellular	67.35	67.98
TraesCS2D01G404600.1	Wheat	golgi	66.98	67.86
GSMUA_Achr5P12420_001	Banana	endoplasmic reticulum	59.51	67.73
TraesCS2B01G425400.1	Wheat	golgi	67.35	67.6
Zm00001d002687_P001	Maize	endoplasmic reticulum	67.35	67.35
GSMUA_Achr5P19450_001	Banana	endoplasmic reticulum	59.51	67.3
EES12648	Sorghum	endoplasmic reticulum	67.35	67.1
TraesCS6D01G227200.1	Wheat	endoplasmic reticulum	67.72	67.1
Os02t0666500-01	Rice	endoplasmic reticulum	66.42	66.92
TraesCS6B01G279400.1	Wheat	endoplasmic reticulum	67.16	66.54
HORVU6Hr1G064170.1	Barley	plasma membrane	67.54	66.42
TraesCS6A01G244900.1	Wheat	endoplasmic reticulum, mitochondrion	67.16	66.42
Os04t0560100-01	Rice	endoplasmic reticulum	67.16	66.06
Bra006743.1-P	Field mustard	endoplasmic reticulum, extracellular	58.4	60.89
Bra003246.1-P	Field mustard	cytosol	34.51	43.74
Bra029361.1-P	Field mustard	endoplasmic reticulum, plastid, vacuole	44.4	42.88
Bra013024.1-P	Field mustard	plastid	43.84	42.27
Bra016739.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	37.69	41.48
Bra032794.1-P	Field mustard	cytosol	35.45	40.51
Bra007259.1-P	Field mustard	endoplasmic reticulum	37.13	40.37
Bra003247.1-P	Field mustard	endoplasmic reticulum	37.13	39.8
Bra019812.1-P	Field mustard	endoplasmic reticulum	38.99	39.66
Bra017333.1-P	Field mustard	endoplasmic reticulum	38.62	38.62
Bra012006.1-P	Field mustard	endoplasmic reticulum, extracellular	33.02	35.61
Bra018051.1-P	Field mustard	endoplasmic reticulum	33.21	35.18
Bra019551.1-P	Field mustard	endoplasmic reticulum	32.84	35.06
Bra040552.1-P	Field mustard	endoplasmic reticulum, golgi	32.09	34.96
Bra038632.1-P	Field mustard	endoplasmic reticulum, golgi	30.78	34.52
Bra029224.1-P	Field mustard	extracellular, golgi	32.46	33.98
Bra035844.1-P	Field mustard	endoplasmic reticulum, golgi	29.29	33.33

Protein Annotations

Gene3D:1.10.630.10	MapMan:21.9.1.1	EnsemblPlantsGene:Bra032642	EnsemblPlants:Bra032642.1	EnsemblPlants:Bra032642.1-P	InterPro:Cyt_P450
InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M4EV09	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086
PANTHER:PTHR24296	PANTHER:PTHR24296:SF9	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI0002543160	SEG:seg

Description

AT1G01600 (E=7e-284) CYP86A4 | CYP86A4; fatty acid (omega-1)-hydroxylase/ oxygen binding

Coordinates

chrA09:+:36987619..36989535

Molecular Weight (calculated)

60854.9 Da

IEP (calculated)

7.890

GRAVY (calculated)

-0.096

Length

536 amino acids

Sequence
(BLAST)

001: MEISNVMLLV AIVAAYWLWF KRISRWLKGP RVWPVLGSLP GLIEQRDRMH EWITENLRAC GGTYQTCICA MPFLAKKQGL VTVTCDPRNL EHMLKTRFDN
101: YPKGPTWQSV FHDLLGQGIF NSDGDTWLFQ RKTAALEFTT RTLRQAMGRW VNRGIKLRFC PILESAQAKA EPIDLQDLIL RLTFDNICGL AFGKDTKTCA
201: PGLPENSFAT AFDRATEASL QRFILPEFMW KLKKWLGLGL EVSLSRSLEE MDGYLAKVIN TRKQELMSQQ ESGHDDLLSR FMMKKKEAYS DTFLQHVVLN
301: FILAGRDTSS VALSWFFWLI TMHPTVEEQI VREICSVLIE TRGIENAASW TQEPLNFDEI DRLVYLKAAL SETIRLYPSV PEDSKHVEND DVLPDGTFVP
401: AGSSVSYSIY AAGRMKSTWG EDCLEFIPER WISPIDGKFI NHDQYRFVAF NAGPRICLGK DLAYLQMKSI AAAVLLRHRI TVVPGHRVEQ KMSLTLFMKN
501: GLLVNLHKRD LEGTIKSLVV AKGDGVIDGK CDGVAV

Best Arabidopsis Sequence Match ( AT1G01600.1 )
(BLAST)

001: MEISNAMLLV AIVTGYWLWF KRISRWLKGP RVWPLLGSLP GLIEQRDRMH EWITENLRAC GGTYQTCIFA VPFLAKKQGL VTVTCDPKNL EHMLKTRFDN
101: YPKGPTWQSV FHDLLGQGIF NSDGDTWLFQ RKTAALEFTT RTLRQAMGRW VNRGIKLRFC PILATAQDNA EPVDLQDLIL RLTFDNICGL AFGKDTRTCA
201: PGLPENGFAS AFDRATEASL QRFIIPKFMW KLKKWLGLGL EVSLSRSLGE IDEYLAAVIN TRKQELMSQQ ESGTHQRHDD LLSRFMMKKT ESYSDTFLQH
301: VALNFILAGR DTSSVALSWF FWLITMHPTV EDKIVREICS VLIETRGTDD VASWTEEPLG FDEIDRLVYL KAAISETLRL YPSVPEDSKH VENDDVLPDG
401: TFVPAGSSVT YSIYAAGRMK STWGEDCLEF NPERWISPID GKFINHDQYR FVAFNAGPRI CLGKDLAYLQ MKTIAAAVLL RHRLTVVPGH KVEQKMSLTL
501: FMKNGLLVNL YKRDLQGIIK SLVVKKSDGV SNGQCNGVIG EGVAVYLNTG VAVV

Arabidopsis Description

CYP86A4Cytochrome P450 86A4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMM1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.