Factsheet for PGSC0003DMT400097242

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g094750.2.1	Tomato	endoplasmic reticulum, golgi	96.71	89.54
KRH48115	Soybean	endoplasmic reticulum	79.26	72.56
KRH64976	Soybean	endoplasmic reticulum	78.23	71.48
Bra004951.1-P	Field mustard	endoplasmic reticulum	77.82	70.45
CDX74778	Canola	endoplasmic reticulum	78.03	70.24
VIT_15s0046g02380.t01	Wine grape	endoplasmic reticulum, golgi	81.52	70.14
AT2G45970.1	Thale cress	endoplasmic reticulum, golgi	77.21	70.02
CDY18885	Canola	endoplasmic reticulum	77.41	69.69
PGSC0003DMT400031804	Potato	endoplasmic reticulum, extracellular	79.06	69.49
AT4G00360.1	Thale cress	endoplasmic reticulum	78.85	69.44
CDX90044	Canola	extracellular, golgi	76.59	69.33
CDY38015	Canola	endoplasmic reticulum	76.39	69.27
Bra032642.1-P	Field mustard	endoplasmic reticulum, golgi	76.18	69.22
OQU85673	Sorghum	cytosol	70.02	69.03
AT1G01600.1	Thale cress	endoplasmic reticulum	77.82	68.41
CDY07223	Canola	endoplasmic reticulum	78.44	68.34
Bra037336.1-P	Field mustard	endoplasmic reticulum	78.44	68.34
CDY66201	Canola	endoplasmic reticulum	78.44	68.34
Bra008519.1-P	Field mustard	endoplasmic reticulum	77.82	68.29
CDY15167	Canola	endoplasmic reticulum, golgi	76.8	67.39
Bra033251.1-P	Field mustard	endoplasmic reticulum, golgi	76.59	67.21
GSMUA_Achr5P12420_001	Banana	endoplasmic reticulum	62.42	64.54
GSMUA_Achr4P26290_001	Banana	endoplasmic reticulum, extracellular	70.23	64.41
TraesCS2A01G407500.1	Wheat	endoplasmic reticulum	69.82	64.27
TraesCS2D01G404600.1	Wheat	golgi	69.61	64.08
Zm00001d017528_P001	Maize	endoplasmic reticulum	70.02	63.86
GSMUA_Achr5P19450_001	Banana	endoplasmic reticulum	62.01	63.71
TraesCS2B01G425400.1	Wheat	golgi	69.82	63.67
Zm00001d002687_P001	Maize	endoplasmic reticulum	69.82	63.43
Os02t0666500-01	Rice	endoplasmic reticulum	68.99	63.16
TraesCS6A01G244900.1	Wheat	endoplasmic reticulum, mitochondrion	70.02	62.92
TraesCS6D01G227200.1	Wheat	endoplasmic reticulum	69.82	62.85
TraesCS6B01G279400.1	Wheat	endoplasmic reticulum	69.61	62.66
EES12648	Sorghum	endoplasmic reticulum	69.2	62.64
HORVU6Hr1G064170.1	Barley	plasma membrane	70.02	62.57
Os04t0560100-01	Rice	endoplasmic reticulum	69.82	62.39
PGSC0003DMT400078030	Potato	endoplasmic reticulum	64.48	60.27
PGSC0003DMT400072790	Potato	cytosol	44.35	45.57
PGSC0003DMT400027430	Potato	endoplasmic reticulum, golgi	46.0	43.92
PGSC0003DMT400018545	Potato	endoplasmic reticulum	39.22	38.43
PGSC0003DMT400048249	Potato	endoplasmic reticulum, golgi	38.81	37.5
PGSC0003DMT400022922	Potato	cytosol	27.93	36.96
PGSC0003DMT400018938	Potato	plastid	37.17	36.57
PGSC0003DMT400039271	Potato	cytosol, endoplasmic reticulum, mitochondrion	34.7	36.5
PGSC0003DMT400080690	Potato	endoplasmic reticulum, golgi	37.37	36.33
PGSC0003DMT400018331	Potato	endoplasmic reticulum	35.11	34.97
PGSC0003DMT400039412	Potato	endoplasmic reticulum	34.7	34.56
PGSC0003DMT400039272	Potato	endoplasmic reticulum	34.7	34.14
PGSC0003DMT400023141	Potato	endoplasmic reticulum, plasma membrane	34.7	34.07
PGSC0003DMT400050139	Potato	endoplasmic reticulum, plasma membrane	33.68	32.22
PGSC0003DMT400052065	Potato	endoplasmic reticulum	33.88	31.73
PGSC0003DMT400039270	Potato	cytosol, endoplasmic reticulum, plastid	18.48	30.82

Protein Annotations

Gene3D:1.10.630.10	MapMan:21.9.1.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M1E073	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400046813	PGSC:PGSC0003DMG400046813	EnsemblPlants:PGSC0003DMT400097242
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF9	SUPFAM:SSF48264
UniParc:UPI00029665D6	:	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400046813]

Coordinates

chr1:-:72289766..72291229

Molecular Weight (calculated)

55317.0 Da

IEP (calculated)

7.746

GRAVY (calculated)

-0.165

Length

487 amino acids

Sequence
(BLAST)

001: MHDWIVDNLR ACGGTYQTCI CAIPFLARKQ GLVTVTCDPK NLEHILKTRF ENYPKGPTWQ AVFHELLGQG IFNSDGDTWL FQRKTAALEF TTRTLRQAMA
101: RWVNRAIQLR FCPILKTAQV EGKPVDLQDL LLRLTFDNIC GLAFGKDPQT LAPGLPDNTF SSAFDRATEA SLQRFILPEV VWKLKKWLGL GMEVSLSRSL
201: VQLDKYMSDI INTRKLELMS QQKDGNPHDD LLSRFMKKKE SYTDKFLQHV ALNFILAGRD TSSVALSWFF WLVIQNPVVE QKILQEISTV LVETRGSDTS
301: SWLEEPLAFE EVDRLTYLKA ALSETLRLYP SVPEDSKHVV VDDVLPDGTF VPAGSSVTYS IYSAGRMKST WGEDCLEFKP ERWLTLDGKK FVMHEQYKFV
401: AFNAGPRICL GKDLAYLQMK SVAAAVLLRH RLTVAPGHKV EQKMSLTLFM KDGLKVDLHP RDLTPFVNSV KEVQLIQILN GDKDECS

Best Arabidopsis Sequence Match ( AT4G00360.1 )
(BLAST)

001: MDVSNTMLLV AVVAAYWLWF QRISRWLKGP RVWPVLGSLP GLIEQRDRMH DWITENLRAC GGTYQTCICA VPFLAKKQGL VTVTCDPKNI EHMLKTRFDN
101: YPKGPTWQAV FHDFLGQGIF NSDGDTWLFQ RKTAALEFTT RTLRQAMGRW VNRGIKLRFC PILETAQNNY EPVDLQDLIL RLTFDNICGL AFGKDTRTCA
201: PGLPENGFAS AFDRATEASL QRFILPEFLW RLKKWLGLGL EVSLSRSLGE IDGYLDAVIN TRKQELLSQR ESGVQRHDDL LSRFMKKKDQ SYSETFLRHV
301: ALNFILAGRD TSSVALSWFF WLITTHPTVE DKIVREICSV LIETRGTDVS SWTAEPLEFD EVDRLVYLKA ALSETLRLYP SVPEDSKHVV NDDILPDGTF
401: VPAGSSVTYS IYAAGRMKST WGEDCLEFKP ERWISPDDGK FVNHDQYRFV AFNAGPRICL GKDLAYLQMK TIAAAVLLRH RLTVAPGHKV EQKMSLTLFM
501: KNGLLVNVHK RDLEVMMKSL VPKERNDVVV LNGKCNGGIG EGVAVNAAVA VAV

Arabidopsis Description

CYP86A2Cytochrome P450 86A2 [Source:UniProtKB/Swiss-Prot;Acc:O23066]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.