Factsheet for PGSC0003DMT400072790

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
endoplasmic reticulum 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70784	Canola	cytosol	11.18	52.48
PGSC0003DMT400078030	Potato	endoplasmic reticulum	49.37	44.91
PGSC0003DMT400097242	Potato	cytosol	45.57	44.35
TraesCS3D01G361200.1	Wheat	plastid	46.62	40.77
TraesCS3A01G368200.1	Wheat	plastid	46.62	40.33
TraesCS3B01G399900.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	46.62	40.18
HORVU3Hr1G085020.1	Barley	endoplasmic reticulum, plasma membrane	46.41	39.93
Os01t0854800-01	Rice	plasma membrane	45.78	39.82
OQU87885	Sorghum	plastid	45.15	39.12
Zm00001d042814_P001	Maize	endoplasmic reticulum, plasma membrane	45.15	39.12
PGSC0003DMT400031804	Potato	endoplasmic reticulum, extracellular	45.36	38.81
Zm00001d012326_P001	Maize	endoplasmic reticulum, golgi	44.73	38.69
GSMUA_Achr6P33790_001	Banana	vacuole	36.92	35.43
PGSC0003DMT400022922	Potato	cytosol	25.32	32.61
PGSC0003DMT400018545	Potato	endoplasmic reticulum	33.76	32.19
PGSC0003DMT400027430	Potato	endoplasmic reticulum, golgi	33.97	31.57
PGSC0003DMT400039271	Potato	cytosol, endoplasmic reticulum, mitochondrion	29.75	30.45
PGSC0003DMT400023141	Potato	endoplasmic reticulum, plasma membrane	31.86	30.44
PGSC0003DMT400018938	Potato	plastid	31.65	30.3
PGSC0003DMT400039412	Potato	endoplasmic reticulum	30.38	29.45
PGSC0003DMT400018331	Potato	endoplasmic reticulum	29.96	29.04
PGSC0003DMT400080690	Potato	endoplasmic reticulum, golgi	30.59	28.94
PGSC0003DMT400039272	Potato	endoplasmic reticulum	30.17	28.89
PGSC0003DMT400048249	Potato	endoplasmic reticulum, golgi	30.38	28.57
PGSC0003DMT400050139	Potato	endoplasmic reticulum, plasma membrane	29.54	27.5
PGSC0003DMT400052065	Potato	endoplasmic reticulum	29.75	27.12
PGSC0003DMT400039270	Potato	cytosol, endoplasmic reticulum, plastid	16.67	27.05

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:M1CQY4	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400028322	PGSC:PGSC0003DMG400028322
EnsemblPlants:PGSC0003DMT400072790	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF26
SUPFAM:SSF48264	UniParc:UPI000296384C	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400028322]

Coordinates

chr5:-:398400..400187

Molecular Weight (calculated)

54339.2 Da

IEP (calculated)

8.899

GRAVY (calculated)

-0.151

Length

474 amino acids

Sequence
(BLAST)

001: MLLNIRRIHE WTTDQLLASP TLGTYQTCGV YIPFLQNWRR SFCTVTCHPK NLEHILNTKF HNYPKGPTWQ NTFGDVLGNQ GISCAKGEEW ISLRKIVVPE
101: LTKSKLGPSL HCWVNPSIKN DLLPILDKAS KHNISIDLQK LMICFGTDNI FGIALGKKMK TLLNPEDPIA LAMDTIFKFA FRRFFYPNIL WKFMKFFCIG
201: SEGSLKKSIQ ILNNTITEAQ EERNNRNKDE TFDDDLLWTF MKKVQVNGHI LPSSAIMGTV LDILLAGRDS VATSASWFFW LVMNNPRVEE KIVHEIITVL
301: KKTRGKDKDT RMDEINSLVY LHAMLLETLR LYPAVPKIVR YAICDDILPD GTYVPAGSDI ILSLYSVGRM KSVWGEDCIE FKPERWLSTD EKRIERHEDG
401: YKFVAFNGGS RICIAKYLTY LEMKSVASAI LLRYELSHVP GHQVTSKLSF TIAMNNGLKV NLKRRDLNDF DVIN

Best Arabidopsis Sequence Match ( AT5G58860.1 )
(BLAST)

001: MEALNSILTG YAVAALSVYA LWFYFLSRRL TGPKVLPFVG SLPYLIANRS RIHDWIADNL RATGGTYQTC TMVIPFVAKA QGFYTVTCHP KNVEHILKTR
101: FDNYPKGPMW RAAFHDLLGQ GIFNSDGDTW LMQRKTAALE FTTRTLRQAM ARWVNGTIKN RLWLILDRAV QNNKPVDLQD LFLRLTFDNI CGLTFGKDPE
201: TLSLDLPDNP FSVAFDTATE ATLKRLLYTG FLWRIQKAMG IGSEDKLKKS LEVVETYMND AIDARKNSPS DDLLSRFLKK RDVNGNVLPT DVLQRIALNF
301: VLAGRDTSSV ALSWFFWLVM NNREVETKIV NELSMVLKET RGNDQEKWTE EPLEFDEADR LVYLKAALAE TLRLYPSVPQ DFKYVVDDDV LPDGTFVPRG
401: STVTYSIYSI GRMKTIWGED CLEFRPERWL TADGERFETP KDGYKFVAFN AGPRTCLGKD LAYNQMKSVA SAVLLRYRVF PVPGHRVEQK MSLTLFMKNG
501: LRVYLQPRGE VLA

Arabidopsis Description

CYP86A1Cytochrome P450 86A1 [Source:UniProtKB/Swiss-Prot;Acc:P48422]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.