Factsheet for PGSC0003DMT400078030

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
plastid 2
extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g076800.2.1	Tomato	endoplasmic reticulum	97.7	97.7
VIT_06s0004g06210.t01	Wine grape	endoplasmic reticulum	79.08	79.38
AT5G58860.1	Thale cress	endoplasmic reticulum	73.9	75.05
CDX71150	Canola	endoplasmic reticulum, extracellular	69.87	74.13
CDY61020	Canola	endoplasmic reticulum, extracellular	69.67	73.78
Bra006743.1-P	Field mustard	endoplasmic reticulum, extracellular	72.17	73.15
KRH30323	Soybean	endoplasmic reticulum, golgi	71.21	71.21
CDY02846	Canola	endoplasmic reticulum, golgi	52.59	71.17
KRH17019	Soybean	endoplasmic reticulum, golgi	73.32	70.74
CDY32676	Canola	endoplasmic reticulum	53.36	69.85
OQU87885	Sorghum	plastid	70.06	66.73
Zm00001d042814_P001	Maize	endoplasmic reticulum, plasma membrane	69.48	66.18
Zm00001d012326_P001	Maize	endoplasmic reticulum, golgi	69.29	65.88
Os01t0854800-01	Rice	plasma membrane	68.33	65.32
TraesCS3A01G368200.1	Wheat	plastid	68.52	65.15
TraesCS3D01G361200.1	Wheat	plastid	67.75	65.13
TraesCS3B01G399900.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	68.33	64.73
HORVU3Hr1G085020.1	Barley	endoplasmic reticulum, plasma membrane	68.33	64.61
PGSC0003DMT400097242	Potato	cytosol	60.27	64.48
GSMUA_Achr6P33790_001	Banana	vacuole	60.08	63.36
PGSC0003DMT400031804	Potato	endoplasmic reticulum, extracellular	62.38	58.66
PGSC0003DMT400072790	Potato	cytosol	44.91	49.37
PGSC0003DMT400027430	Potato	endoplasmic reticulum, golgi	42.61	43.53
PGSC0003DMT400018545	Potato	endoplasmic reticulum	38.58	40.44
PGSC0003DMT400039271	Potato	cytosol, endoplasmic reticulum, mitochondrion	33.01	37.15
PGSC0003DMT400018938	Potato	plastid	34.55	36.36
PGSC0003DMT400048249	Potato	endoplasmic reticulum, golgi	35.12	36.31
PGSC0003DMT400039412	Potato	endoplasmic reticulum	33.59	35.79
PGSC0003DMT400039272	Potato	endoplasmic reticulum	33.97	35.76
PGSC0003DMT400080690	Potato	endoplasmic reticulum, golgi	33.78	35.13
PGSC0003DMT400022922	Potato	cytosol	24.57	34.78
PGSC0003DMT400018331	Potato	endoplasmic reticulum	31.48	33.54
PGSC0003DMT400023141	Potato	endoplasmic reticulum, plasma membrane	31.67	33.27
PGSC0003DMT400039270	Potato	cytosol, endoplasmic reticulum, plastid	18.62	33.22
PGSC0003DMT400050139	Potato	endoplasmic reticulum, plasma membrane	31.67	32.42
PGSC0003DMT400052065	Potato	endoplasmic reticulum	32.05	32.12

Protein Annotations

Gene3D:1.10.630.10	MapMan:21.9.1.1	ProteinID:ABZ80830	ProteinID:ABZ80830.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	EMBL:EU293405	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0010345	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016705
GO:GO:0018685	GO:GO:0019748	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396
UniProt:M1CZ99	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400030349	PGSC:PGSC0003DMG400030349	EnsemblPlants:PGSC0003DMT400078030	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF26	SUPFAM:SSF48264	TMHMM:TMhelix
UniParc:UPI0002964767	:	:	:	:	:

Description

CYP86A33 fatty acid omega-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400030349]

Coordinates

chr6:+:57074754..57076893

Molecular Weight (calculated)

59832.3 Da

IEP (calculated)

9.219

GRAVY (calculated)

-0.258

Length

521 amino acids

Sequence
(BLAST)

001: MDPILVYSGI IAAITVYFLW FYLLAQRLSG PKVWPLVGSL PYTFLNRRRF HDWISQNLRS TGVSATYQTC TICIPFLAWK QGFYTVTCHP KNIEHILRTR
101: FDNYPKGPTW QNAFDDLLGQ GIFNSDGDTW LMQRKTAALE FTTRTLRQAM NRWVNRTIRT RLWVILDKAA KEKNPVELQD LLLRLTFDNI CGLTFGKDPE
201: TLSPKMPENP FAIAFDSATE ATMQRLLYPY FLWRLKKFLG IGAEKRLQKS LKVVENYISE ALDSRKESPS DDLLSRFMKK KDINGNSFPS DVLKRIALNF
301: VLAGRDTSSV AMSWFFWNVM NDSHVENKIV EEISNVLKES RGEDHEKWTE EPLNFDEADK LIYLKAALAE TLRLYPSVPE DFKYVVSDDV LPDGTWVPAG
401: STVTYSIYSV GRMKTVWGED CMEFKPERWL STGGDRFEPP KDGYKFVAFN GGPRTCLGKD LAYLQMKSVA AAILLRYRLL PVPGHKVEQK MSLTLFMKNG
501: LKVYLNPREL DLATPKIAMS A

Best Arabidopsis Sequence Match ( AT5G58860.1 )
(BLAST)

001: MEALNSILTG YAVAALSVYA LWFYFLSRRL TGPKVLPFVG SLPYLIANRS RIHDWIADNL RATGGTYQTC TMVIPFVAKA QGFYTVTCHP KNVEHILKTR
101: FDNYPKGPMW RAAFHDLLGQ GIFNSDGDTW LMQRKTAALE FTTRTLRQAM ARWVNGTIKN RLWLILDRAV QNNKPVDLQD LFLRLTFDNI CGLTFGKDPE
201: TLSLDLPDNP FSVAFDTATE ATLKRLLYTG FLWRIQKAMG IGSEDKLKKS LEVVETYMND AIDARKNSPS DDLLSRFLKK RDVNGNVLPT DVLQRIALNF
301: VLAGRDTSSV ALSWFFWLVM NNREVETKIV NELSMVLKET RGNDQEKWTE EPLEFDEADR LVYLKAALAE TLRLYPSVPQ DFKYVVDDDV LPDGTFVPRG
401: STVTYSIYSI GRMKTIWGED CLEFRPERWL TADGERFETP KDGYKFVAFN AGPRTCLGKD LAYNQMKSVA SAVLLRYRVF PVPGHRVEQK MSLTLFMKNG
501: LRVYLQPRGE VLA

Arabidopsis Description

CYP86A1Cytochrome P450 86A1 [Source:UniProtKB/Swiss-Prot;Acc:P48422]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.