Factsheet for PGSC0003DMT400039271

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol

Predictor Summary:

plastid 2
peroxisome 1
cytosol 1
endoplasmic reticulum 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039270	Potato	cytosol, endoplasmic reticulum, plastid	60.26	95.55
Solyc03g111290.1.1	Tomato	endoplasmic reticulum	94.6	88.66
PGSC0003DMT400039272	Potato	endoplasmic reticulum	92.87	86.87
PGSC0003DMT400039412	Potato	endoplasmic reticulum	90.71	85.89
VIT_17s0000g01490.t01	Wine grape	endoplasmic reticulum, golgi	67.17	60.74
KRH75826	Soybean	plastid	64.15	58.93
KRH66027	Soybean	endoplasmic reticulum	64.58	58.86
KRH66025	Soybean	endoplasmic reticulum	64.58	58.86
AT3G48520.1	Thale cress	endoplasmic reticulum	62.2	56.92
Bra018051.1-P	Field mustard	endoplasmic reticulum	61.34	56.13
CDY08079	Canola	endoplasmic reticulum	61.34	56.13
CDY59153	Canola	endoplasmic reticulum	61.12	55.93
Bra019551.1-P	Field mustard	endoplasmic reticulum	60.48	55.78
CDY37921	Canola	endoplasmic reticulum	55.94	55.22
GSMUA_Achr6P27620_001	Banana	endoplasmic reticulum	50.54	55.06
CDY16724	Canola	endoplasmic reticulum, golgi	55.72	54.78
CDY71281	Canola	endoplasmic reticulum, golgi	56.37	54.6
Bra038632.1-P	Field mustard	endoplasmic reticulum, golgi	56.37	54.6
Bra035844.1-P	Field mustard	endoplasmic reticulum, golgi	55.51	54.56
Bra029224.1-P	Field mustard	extracellular, golgi	60.26	54.49
CDX84409	Canola	endoplasmic reticulum	55.94	54.18
CDY56885	Canola	mitochondrion	33.05	54.06
CDY48144	Canola	endoplasmic reticulum, golgi	54.86	53.59
PGSC0003DMT400052065	Potato	endoplasmic reticulum	60.04	53.46
Zm00001d004664_P001	Maize	endoplasmic reticulum	58.53	52.62
AT3G01900.1	Thale cress	endoplasmic reticulum	56.37	52.62
CDX77090	Canola	endoplasmic reticulum, golgi	55.72	52.44
GSMUA_Achr3P19530_001	Banana	endoplasmic reticulum	51.62	51.84
Bra040552.1-P	Field mustard	endoplasmic reticulum, golgi	55.08	51.83
CDY70403	Canola	endoplasmic reticulum, golgi	55.08	51.83
KXG28317	Sorghum	endoplasmic reticulum	58.53	51.82
Zm00001d049201_P001	Maize	endoplasmic reticulum	57.45	51.35
GSMUA_Achr8P28290_001	Banana	plastid	50.76	50.43
TraesCS1D01G359100.1	Wheat	endoplasmic reticulum	57.24	49.91
AT5G63450.2	Thale cress	endoplasmic reticulum, plasma membrane, plastid	61.12	49.82
TraesCS1A01G351600.1	Wheat	endoplasmic reticulum	57.02	49.81
TraesCS1B01G371900.1	Wheat	plastid	57.24	47.92
Os12t0443000-00	Rice	endoplasmic reticulum, plasma membrane	53.56	46.88
HORVU1Hr1G080680.1	Barley	golgi, peroxisome, plastid	57.24	46.01
PGSC0003DMT400018331	Potato	endoplasmic reticulum	48.38	45.81
PGSC0003DMT400022922	Potato	cytosol	36.29	45.65
PGSC0003DMT400023141	Potato	endoplasmic reticulum, plasma membrane	47.73	44.56
PGSC0003DMT400048249	Potato	endoplasmic reticulum, golgi	47.73	43.85
PGSC0003DMT400080690	Potato	endoplasmic reticulum, golgi	47.3	43.71
PGSC0003DMT400018545	Potato	endoplasmic reticulum	46.87	43.66
PGSC0003DMT400050139	Potato	endoplasmic reticulum, plasma membrane	46.65	42.44
PGSC0003DMT400018938	Potato	plastid	45.36	42.42
PGSC0003DMT400027430	Potato	endoplasmic reticulum, golgi	38.44	34.9
PGSC0003DMT400097242	Potato	cytosol	36.5	34.7
PGSC0003DMT400078030	Potato	endoplasmic reticulum	37.15	33.01
PGSC0003DMT400031804	Potato	endoplasmic reticulum, extracellular	37.37	31.23
PGSC0003DMT400072790	Potato	cytosol	30.45	29.75

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.3.4	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705
GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	UniProt:M1B812	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400015184
PGSC:PGSC0003DMG400015184	EnsemblPlants:PGSC0003DMT400039271	PRINTS:PR00385	PRINTS:PR00463	PANTHER:PTHR24296	PANTHER:PTHR24296:SF5
SUPFAM:SSF48264	UniParc:UPI00029651B2	SEG:seg	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400015184]

Coordinates

chr3:-:50888577..50890118

Molecular Weight (calculated)

52910.5 Da

IEP (calculated)

8.672

GRAVY (calculated)

-0.202

Length

463 amino acids

Sequence
(BLAST)

001: MYGPSSYPIL GCLISFYKNR HQLLDWYTQL LSESPTQTIL VQRFGAPRTI ITANPDNVEY MLKTNFINYP KGKPFTDILG DFLGRGIFNV DGELWSAQRK
101: LASHEFSTNS LRELVVKALE EVVENRLIPL LIQAAKSGKV LDLQDVLRRF AFDTICKVSL GTDPHCLDDL SHVPVLVESF DTASLACAMR GMAPVYAIWK
201: SKRALNLGSE KKLKENVKRV HCCIDEIIVE KKQKIVSGNH MDLLSRLLLA GHENEVVRDM VISFLIAGRD TTSSALTWLF WLITNHHDIK DKMIKEITSI
301: NNGDHKALEF DELKEMKYLA ACLNESMRLY PPVAWDSKHA AKDDILPDGT RVQKGNRVTY FQYGMGRMEE IWGKDRLEFK PERWMDENGE LKIVSPYKYP
401: VFQAGPRVCL GKEMAFTQMK YVLASVLRRF EIKPVKVEKP VFMPLLTAHM VGGFNVRIHH RDG

Best Arabidopsis Sequence Match ( AT3G48520.1 )
(BLAST)

001: MAFLLSFLIL AFLITIIFFL SSSSTKKVQE NTTYGPPSYP LIGSILSFNK NRHRLLQWYT ELLRLSPSQT ILVPLLGNRR TIITTNPLNV EYILKTNFFN
101: FPKGKPFTDL LGDLLGGGIF NVDGHSWSSQ RKLASHEFST RSLRSFAFEV LKDEVENRLV PVLSTAADVG TTVDLQDVLK RFAFDVVCKV SLGWDPDCLD
201: LTRPVNPLVE AFDTAAEISA RRATEPIYAV WKTKRVLNVG SERKLREAIR TVHVLVSEIV RAKKKSLEIG TGAEAKQDLL SRFLAAGHNG EAVRDMVISF
301: IMAGRDTTSA AMTWLFWLLT ENDDVERKIL EEVDPLVSLG LGFEDLKEMA YTKACLCEAM RLYPPVSWDS KHAANDDVLP DGTRVKRGDK VTYFPYGMGR
401: METLWGTDSE EFNPNRWFDS EPGSTRPVLK PISPYKFPVF QAGPRVCVGK EMAFMQMKYV VGSVLSRFEI VPVNKDRPVF VPLLTAHMAG GLKVKIKRRS
501: HILNNV

Arabidopsis Description

CYP94B3CYP94B3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8H3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.