Factsheet for PGSC0003DMT400039270

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol

Predictor Summary:

plastid 3
peroxisome 1
cytosol 1
endoplasmic reticulum 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039271	Potato	cytosol, endoplasmic reticulum, mitochondrion	95.55	60.26
Solyc03g111290.1.1	Tomato	endoplasmic reticulum	93.84	55.47
PGSC0003DMT400039272	Potato	endoplasmic reticulum	91.1	53.74
PGSC0003DMT400039412	Potato	endoplasmic reticulum	89.04	53.17
VIT_17s0000g01490.t01	Wine grape	endoplasmic reticulum, golgi	67.81	38.67
GSMUA_Achr6P27620_001	Banana	endoplasmic reticulum	54.45	37.41
KRH66027	Soybean	endoplasmic reticulum	64.73	37.2
KRH66025	Soybean	endoplasmic reticulum	64.73	37.2
KRH75826	Soybean	plastid	64.04	37.1
CDY16724	Canola	endoplasmic reticulum, golgi	58.9	36.52
Bra035844.1-P	Field mustard	endoplasmic reticulum, golgi	58.56	36.31
CDY48144	Canola	endoplasmic reticulum, golgi	58.22	35.87
AT3G48520.1	Thale cress	endoplasmic reticulum	61.3	35.38
CDY08079	Canola	endoplasmic reticulum	59.93	34.59
Bra018051.1-P	Field mustard	endoplasmic reticulum	59.93	34.59
CDY59153	Canola	endoplasmic reticulum	59.25	34.19
GSMUA_Achr3P19530_001	Banana	endoplasmic reticulum	53.77	34.06
Bra029224.1-P	Field mustard	extracellular, golgi	59.25	33.79
Bra019551.1-P	Field mustard	endoplasmic reticulum	57.53	33.47
GSMUA_Achr8P28290_001	Banana	plastid	53.08	33.26
PGSC0003DMT400052065	Potato	endoplasmic reticulum	58.56	32.88
CDX84409	Canola	endoplasmic reticulum	53.42	32.64
Zm00001d004664_P001	Maize	endoplasmic reticulum	57.53	32.62
CDY71281	Canola	endoplasmic reticulum, golgi	53.08	32.43
Bra038632.1-P	Field mustard	endoplasmic reticulum, golgi	52.74	32.22
KXG28317	Sorghum	endoplasmic reticulum	57.53	32.12
Zm00001d049201_P001	Maize	endoplasmic reticulum	56.16	31.66
AT3G01900.1	Thale cress	endoplasmic reticulum	53.42	31.45
CDY37921	Canola	endoplasmic reticulum	50.34	31.34
CDX77090	Canola	endoplasmic reticulum, golgi	52.4	31.1
TraesCS1D01G359100.1	Wheat	endoplasmic reticulum	56.51	31.07
TraesCS1A01G351600.1	Wheat	endoplasmic reticulum	56.16	30.94
Bra040552.1-P	Field mustard	endoplasmic reticulum, golgi	51.71	30.69
CDY70403	Canola	endoplasmic reticulum, golgi	51.71	30.69
AT5G63450.2	Thale cress	endoplasmic reticulum, plasma membrane, plastid	59.25	30.46
TraesCS1B01G371900.1	Wheat	plastid	56.51	29.84
HORVU1Hr1G080680.1	Barley	golgi, peroxisome, plastid	56.51	28.65
PGSC0003DMT400018331	Potato	endoplasmic reticulum	47.26	28.22
Os12t0443000-00	Rice	endoplasmic reticulum, plasma membrane	50.68	27.98
PGSC0003DMT400023141	Potato	endoplasmic reticulum, plasma membrane	46.92	27.62
PGSC0003DMT400018545	Potato	endoplasmic reticulum	45.55	26.76
PGSC0003DMT400080690	Potato	endoplasmic reticulum, golgi	44.18	25.75
PGSC0003DMT400048249	Potato	endoplasmic reticulum, golgi	43.84	25.4
PGSC0003DMT400050139	Potato	endoplasmic reticulum, plasma membrane	43.84	25.15
PGSC0003DMT400018938	Potato	plastid	41.78	24.65
PGSC0003DMT400022922	Potato	cytosol	28.77	22.83
PGSC0003DMT400027430	Potato	endoplasmic reticulum, golgi	34.93	20.0
PGSC0003DMT400078030	Potato	endoplasmic reticulum	33.22	18.62
PGSC0003DMT400097242	Potato	cytosol	30.82	18.48
PGSC0003DMT400031804	Potato	endoplasmic reticulum, extracellular	33.9	17.87
PGSC0003DMT400072790	Potato	cytosol	27.05	16.67
CDY56885	Canola	mitochondrion	15.07	15.55

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0020037
GO:GO:0055114	InterPro:IPR036396	UniProt:M1B811	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400015183	PGSC:PGSC0003DMG400015183
EnsemblPlants:PGSC0003DMT400039270	PANTHER:PTHR24296	PANTHER:PTHR24296:SF5	SUPFAM:SSF48264	UniParc:UPI00029602A1	SEG:seg

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400015183]

Coordinates

chr3:-:50905600..50907272

Molecular Weight (calculated)

32939.2 Da

IEP (calculated)

8.776

GRAVY (calculated)

-0.073

Length

292 amino acids

Sequence
(BLAST)

001: MYGPSSYPIL GCLISFYKNR HQLLDWYTQL LSESPTQTIL VQRFGAPRTI ITANPNNVEY MLKTNFINYP KGKPFTDILG DFLGRGIFNV DGELWSAQRK
101: LASHEFSTNS LREFVVKTLE EVVENRLIPL LIQAAKSGKV LDLQDVLRRF AFDTICKVSL GTDPHCLDDL SHVPVLVESF DTASLECAMR GMAPVYAIWK
201: SKRALNLGSE KKLKENVKRV HCCIDKIIEE KKQKIVSGNH MDLLSRLLLA GHENEVVRDM VISFLIAGRD TTSSALTWLF GSLPITMTSK TK

Best Arabidopsis Sequence Match ( AT3G01900.1 )
(BLAST)

001: MEASTFILLL VLVLLLVSAG KHVIYSCRNS TPKTYPVIGC LISFYTNRNR LLDWYTELLT ESPSRTVVIR RLAARRTVVT ANPSNVEYIL KTNFDNYPKG
101: KPFTEILGDF LGNGIFNVDG NLWLKQRRLA THDFTPKSLR EYVTVLRNEV EKELLAFLNA AAEDSQPFDL QELLRRFTFN IVCIVFLGID RCTLNPSSPV
201: SEFDRAFQTA SAVSAGRGSA PLSFVWKFKR LVGFGSEKEL RKAVGEVHNC VDEIIRDKKR KPANQDFLSR LIVAGESDET VRDMVISIIM AGRDTTSAVA
301: TRLFWLITGH EETEHDLVSE IRSVKEEITG GFDYESLKKL SLLKACLCEV MRLYPPVPWD SKHALTDDRL PDGTLVRAGD RVTYFPYGMG RMEELWGEDW
401: DEFKPNRWAE SYDKTCCRVL KKVNPFKFPV FQAGPRVCLG EEMAYVQMKY IVASILDRFE IEPIPTDKPD FVPMLTAHMA GGMQVRVHRR DPSLSP

Arabidopsis Description

CYP94B2CYP94B2 [Source:UniProtKB/TrEMBL;Acc:A0A178VKA7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.