Factsheet for PGSC0003DMT400080690

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

cytosol 1
peroxisome 1
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g066150.1.1	Tomato	plastid	92.61	92.43
PGSC0003DMT400048249	Potato	endoplasmic reticulum, golgi	75.85	75.4
VIT_07s0141g00920.t01	Wine grape	endoplasmic reticulum, plasma membrane	68.06	67.39
VIT_07s0141g00890.t01	Wine grape	endoplasmic reticulum, plasma membrane	67.47	66.93
PGSC0003DMT400018938	Potato	plastid	61.48	62.22
KRH67327	Soybean	endoplasmic reticulum, golgi	62.67	61.57
KRG95635	Soybean	endoplasmic reticulum, plasma membrane	61.88	60.55
KRH67328	Soybean	endoplasmic reticulum, golgi	62.08	60.15
KRH67326	Soybean	endoplasmic reticulum	60.48	59.53
KRH19520	Soybean	endoplasmic reticulum	59.08	58.85
PGSC0003DMT400039271	Potato	cytosol, endoplasmic reticulum, mitochondrion	43.71	47.3
PGSC0003DMT400039412	Potato	endoplasmic reticulum	44.51	45.6
PGSC0003DMT400039272	Potato	endoplasmic reticulum	44.11	44.65
PGSC0003DMT400039270	Potato	cytosol, endoplasmic reticulum, plastid	25.75	44.18
PGSC0003DMT400022922	Potato	cytosol	32.34	44.02
PGSC0003DMT400018545	Potato	endoplasmic reticulum	42.32	42.66
PGSC0003DMT400018331	Potato	endoplasmic reticulum	38.92	39.88
PGSC0003DMT400023141	Potato	endoplasmic reticulum, plasma membrane	39.12	39.52
PGSC0003DMT400050139	Potato	endoplasmic reticulum, plasma membrane	39.32	38.7
PGSC0003DMT400052065	Potato	endoplasmic reticulum	39.72	38.27
PGSC0003DMT400027430	Potato	endoplasmic reticulum, golgi	38.32	37.65
PGSC0003DMT400097242	Potato	cytosol	36.33	37.37
PGSC0003DMT400078030	Potato	endoplasmic reticulum	35.13	33.78
PGSC0003DMT400031804	Potato	endoplasmic reticulum, extracellular	36.13	32.67
PGSC0003DMT400072790	Potato	cytosol	28.94	30.59

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102587068	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016705	GO:GO:0020037	GO:GO:0055114
InterPro:IPR036396	UniProt:M1D3U5	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400031423	PGSC:PGSC0003DMG400031423	EnsemblPlants:PGSC0003DMT400080690
PRINTS:PR00385	PRINTS:PR00463	PANTHER:PTHR24296	PANTHER:PTHR24296:SF11	SUPFAM:SSF48264	TMHMM:TMhelix
UniParc:UPI0002951B25	RefSeq:XP_006351638.1	SEG:seg	:	:	:

Description

Cytochrome P450-dependent fatty acid hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400031423]

Coordinates

chr9:+:49585592..49587298

Molecular Weight (calculated)

57850.0 Da

IEP (calculated)

9.226

GRAVY (calculated)

-0.116

Length

501 amino acids

Sequence
(BLAST)

001: MIIDLEFSTS LLICLLPFLL ILFINLFNSK STKIPKSYPI IGSYFSILAN KHRRIQWTSD VIQTTTNLTF TLIRPFGFRQ IFTANPSNVQ YILKTHFHIY
101: QKGHVFKSTM ADFLGDGIFN VDGEIWKYQR QVASHEFNTK SLRKFVETVV DTELNERLIP FLAVAAAEKK VVDFQDILQR FAFDNICKIA FGYDPAYLLP
201: SLPQAKFAVA FEEAVKLSSE RFNAILPFLW KIKRHFNFGT EKKFKIAVDE VRQFAKQLVK EKQRELNEKS SLDSVDLLSR FLSVGHTDED FVTDIVISFI
301: LAGRDTTSAA LTWFFWLISE HPVVESSILN EIKSKSESPV YNEVKEMIYT HASLCESMRF YPPVPIDSKT ATEDNVLPDG TFVKKGTRVS YHPYAMGRAD
401: KLWGKDWDKF KPERWLDRDE VTGNWNFVTK DMYTYPVFQA GPRICLGKEM AFLQMKRVVA GVLRRFKVVP VTEKGVEPVF ISYLTAKMKG GFHVTIEERD
501: H

Best Arabidopsis Sequence Match ( AT1G34540.1 )
(BLAST)

001: MALLIFIFLL CFPISIFFIF FTKKSSSEFG FKSYPIVGSF PGLVNNRHRF LDWTVETLSR CPTQTAIFRR PGKQQLIMTA NPSNVEYMLK TKFESFPKGQ
101: QFTSVLEDFL GHGIFNSDGD MWWKQRKTAS YEFSTKSLRD FVMSNVTVEI NTRLVPVLVE AATTGKLIDL QDILERFAFD NICKLAFNVD CACLGHDGAV
201: GVNFMRAFET AATIISQRFR SVASCAWRIK KKLNIGSERV LRESIATVHK FADEIVRNRI DQGRSSDHKE DLLSRFISKE EMNSPEILRD IVISFILAGR
301: DTTSSALSWF FWLLSMHPEV EDKILQELNS IRARTGKRIG EVYGFEHLKM MNYLHAAITE SLRLYPPVPV DIKSCAEDNV LPDGTFVGKG WAITYNIFAM
401: GRMESIWGKD CDRFDPERWI DETNGCFRGE DPSKFPAFHA GPRMCVGKDM AYIQMKSIVA AVLERFVVEV PGKERPEILL SMTLRIKGGL FARVQERS

Arabidopsis Description

CYP94D1CYP94D1 [Source:UniProtKB/TrEMBL;Acc:A0A178WEM5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.