Factsheet for PGSC0003DMT400052065

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 8
vacuole 5
plasma membrane 5
golgi 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g094110.1.1	Tomato	endoplasmic reticulum	89.81	91.03
PGSC0003DMT400039271	Potato	cytosol, endoplasmic reticulum, mitochondrion	53.46	60.04
PGSC0003DMT400039270	Potato	cytosol, endoplasmic reticulum, plastid	32.88	58.56
PGSC0003DMT400039412	Potato	endoplasmic reticulum	54.42	57.87
PGSC0003DMT400039272	Potato	endoplasmic reticulum	53.46	56.16
AT3G01900.1	Thale cress	endoplasmic reticulum	53.46	56.05
CDX77090	Canola	endoplasmic reticulum, golgi	52.88	55.89
VIT_14s0068g02120.t01	Wine grape	endoplasmic reticulum, plastid	57.31	55.6
Bra040552.1-P	Field mustard	endoplasmic reticulum, golgi	52.5	55.49
CDY70403	Canola	endoplasmic reticulum, golgi	52.5	55.49
GSMUA_Achr6P27620_001	Banana	endoplasmic reticulum	44.81	54.82
KRH06949	Soybean	golgi, plasma membrane	53.85	54.58
AT3G48520.1	Thale cress	endoplasmic reticulum	52.88	54.35
Bra018051.1-P	Field mustard	endoplasmic reticulum	52.69	54.15
CDY08079	Canola	endoplasmic reticulum	52.69	54.15
CDX84409	Canola	endoplasmic reticulum	49.62	53.97
CDY59153	Canola	endoplasmic reticulum	52.5	53.95
KRG94521	Soybean	endoplasmic reticulum, plasma membrane	52.5	53.95
Bra019551.1-P	Field mustard	endoplasmic reticulum	51.92	53.78
CDY71281	Canola	endoplasmic reticulum, golgi	49.42	53.77
CDY37921	Canola	endoplasmic reticulum	48.46	53.73
Bra038632.1-P	Field mustard	endoplasmic reticulum, golgi	49.23	53.56
Bra029224.1-P	Field mustard	extracellular, golgi	52.69	53.52
CDY16724	Canola	endoplasmic reticulum, golgi	47.69	52.65
GSMUA_Achr8P28290_001	Banana	plastid	46.92	52.36
Bra035844.1-P	Field mustard	endoplasmic reticulum, golgi	47.31	52.23
CDY56885	Canola	mitochondrion	28.08	51.59
GSMUA_Achr3P19530_001	Banana	endoplasmic reticulum	45.19	50.98
Zm00001d004664_P001	Maize	endoplasmic reticulum	50.38	50.87
CDY48144	Canola	endoplasmic reticulum, golgi	46.35	50.84
Zm00001d049201_P001	Maize	endoplasmic reticulum	50.58	50.77
KXG28317	Sorghum	endoplasmic reticulum	50.19	49.9
TraesCS1A01G351600.1	Wheat	endoplasmic reticulum	50.0	49.06
TraesCS1D01G359100.1	Wheat	endoplasmic reticulum	49.81	48.78
AT5G63450.2	Thale cress	endoplasmic reticulum, plasma membrane, plastid	51.92	47.54
TraesCS1B01G371900.1	Wheat	plastid	49.62	46.65
Os12t0443000-00	Rice	endoplasmic reticulum, plasma membrane	46.54	45.75
HORVU1Hr1G080680.1	Barley	golgi, peroxisome, plastid	50.38	45.49
PGSC0003DMT400023141	Potato	endoplasmic reticulum, plasma membrane	41.73	43.75
PGSC0003DMT400022922	Potato	cytosol	30.96	43.75
PGSC0003DMT400018331	Potato	endoplasmic reticulum	39.04	41.51
PGSC0003DMT400050139	Potato	endoplasmic reticulum, plasma membrane	40.0	40.86
PGSC0003DMT400048249	Potato	endoplasmic reticulum, golgi	39.23	40.48
PGSC0003DMT400080690	Potato	endoplasmic reticulum, golgi	38.27	39.72
PGSC0003DMT400018545	Potato	endoplasmic reticulum	37.88	39.64
PGSC0003DMT400018938	Potato	plastid	37.5	39.39
PGSC0003DMT400027430	Potato	endoplasmic reticulum, golgi	33.65	34.31
PGSC0003DMT400097242	Potato	cytosol	31.73	33.88
PGSC0003DMT400078030	Potato	endoplasmic reticulum	32.12	32.05
PGSC0003DMT400031804	Potato	endoplasmic reticulum, extracellular	32.88	30.87
PGSC0003DMT400072790	Potato	cytosol	27.12	29.75

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.3.4	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:M1BSR4	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400020213	PGSC:PGSC0003DMG400020213
EnsemblPlants:PGSC0003DMT400052065	PRINTS:PR00385	PRINTS:PR00465	PANTHER:PTHR24296	PANTHER:PTHR24296:SF5	SUPFAM:SSF48264
TMHMM:TMhelix	UniParc:UPI000294FCDD	SEG:seg	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400020213]

Coordinates

chr2:-:47959077..47961227

Molecular Weight (calculated)

59937.1 Da

IEP (calculated)

7.496

GRAVY (calculated)

-0.095

Length

520 amino acids

Sequence
(BLAST)

001: MVTFLSIFTT YPFFILPFFC LTLILYLTYV IVEQFQQGAR GFEGPPTYPI IGCLIPFYKN RYRLLDWYTH LLSHSPTKTI VIDRLGARRT IVTANPHNVE
101: YMLKTNFDNF PKGKPFNEIL GDFLGNGIFN VDGEMWYKQR KMVSHEFTAR CLRDYVVNAL KEEVENKLLP MLDLMEAENR AFDLQDLLRR LGFDVVCKVS
201: LGFDPCCLNH SLPFSPLLHA FERASQICAG RGAAPISAIW KVKRWLNIGS ERQLRLAIDQ IHSSVADIIR ERKIKIRGEN QQEISKDLLS KLILAENFDE
301: EEVRDMVISF IIAGRDTISA AMTWLFYLLT LHPEIENELV SKELRFIEAE TLTKHETLRE MKFLKACLCE TMRLYPPVAW DSKHAIADDI LPDGTRIKAG
401: NRVTYFPYGM GRMENLWGKD MLEFKPERWM QNSEEDEGGV AEQASNLYKF PVFQAGPRVC LGKELAFIQM KYVVSSILKR FQIRPACSDP PVFLPLLTAH
501: MAGGFKIFVH KTKNVNLDDP

Best Arabidopsis Sequence Match ( AT3G01900.1 )
(BLAST)

001: MEASTFILLL VLVLLLVSAG KHVIYSCRNS TPKTYPVIGC LISFYTNRNR LLDWYTELLT ESPSRTVVIR RLAARRTVVT ANPSNVEYIL KTNFDNYPKG
101: KPFTEILGDF LGNGIFNVDG NLWLKQRRLA THDFTPKSLR EYVTVLRNEV EKELLAFLNA AAEDSQPFDL QELLRRFTFN IVCIVFLGID RCTLNPSSPV
201: SEFDRAFQTA SAVSAGRGSA PLSFVWKFKR LVGFGSEKEL RKAVGEVHNC VDEIIRDKKR KPANQDFLSR LIVAGESDET VRDMVISIIM AGRDTTSAVA
301: TRLFWLITGH EETEHDLVSE IRSVKEEITG GFDYESLKKL SLLKACLCEV MRLYPPVPWD SKHALTDDRL PDGTLVRAGD RVTYFPYGMG RMEELWGEDW
401: DEFKPNRWAE SYDKTCCRVL KKVNPFKFPV FQAGPRVCLG EEMAYVQMKY IVASILDRFE IEPIPTDKPD FVPMLTAHMA GGMQVRVHRR DPSLSP

Arabidopsis Description

CYP94B2CYP94B2 [Source:UniProtKB/TrEMBL;Acc:A0A178VKA7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.