Factsheet for PGSC0003DMT400031804

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

cytosol 1
plastid 2
extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g081220.1.1	Tomato	endoplasmic reticulum, extracellular	97.65	97.65
PGSC0003DMT400097242	Potato	cytosol	69.49	79.06
VIT_02s0025g03320.t01	Wine grape	endoplasmic reticulum, golgi	77.08	78.78
KRH59920	Soybean	endoplasmic reticulum, plasma membrane	72.56	76.14
KRH41201	Soybean	endoplasmic reticulum, plasma membrane	66.43	75.72
AT1G63710.1	Thale cress	endoplasmic reticulum, golgi	68.05	72.08
TraesCS2A01G407500.1	Wheat	endoplasmic reticulum	65.52	68.62
OQU85673	Sorghum	cytosol	61.01	68.42
TraesCS2D01G404600.1	Wheat	golgi	65.16	68.24
TraesCS2B01G425400.1	Wheat	golgi	65.52	67.98
Zm00001d017528_P001	Maize	endoplasmic reticulum	64.8	67.23
GSMUA_Achr5P19450_001	Banana	endoplasmic reticulum	57.4	67.09
GSMUA_Achr5P12420_001	Banana	endoplasmic reticulum	56.86	66.88
Os02t0666500-01	Rice	endoplasmic reticulum	64.08	66.73
GSMUA_Achr4P26290_001	Banana	endoplasmic reticulum, extracellular	63.72	66.48
Os04t0560100-01	Rice	endoplasmic reticulum	65.16	66.24
TraesCS6D01G227200.1	Wheat	endoplasmic reticulum	64.44	65.99
TraesCS6B01G279400.1	Wheat	endoplasmic reticulum	64.26	65.8
TraesCS6A01G244900.1	Wheat	endoplasmic reticulum, mitochondrion	64.08	65.5
Zm00001d002687_P001	Maize	endoplasmic reticulum	63.36	65.49
HORVU6Hr1G064170.1	Barley	plasma membrane	64.26	65.32
EES12648	Sorghum	endoplasmic reticulum	63.18	65.06
PGSC0003DMT400078030	Potato	endoplasmic reticulum	58.66	62.38
PGSC0003DMT400027430	Potato	endoplasmic reticulum, golgi	41.88	45.49
PGSC0003DMT400072790	Potato	cytosol	38.81	45.36
PGSC0003DMT400018545	Potato	endoplasmic reticulum	37.0	41.25
PGSC0003DMT400018938	Potato	plastid	35.02	39.19
PGSC0003DMT400048249	Potato	endoplasmic reticulum, golgi	34.66	38.1
PGSC0003DMT400039271	Potato	cytosol, endoplasmic reticulum, mitochondrion	31.23	37.37
PGSC0003DMT400039412	Potato	endoplasmic reticulum	32.31	36.61
PGSC0003DMT400022922	Potato	cytosol	24.19	36.41
PGSC0003DMT400039272	Potato	endoplasmic reticulum	32.31	36.16
PGSC0003DMT400080690	Potato	endoplasmic reticulum, golgi	32.67	36.13
PGSC0003DMT400018331	Potato	endoplasmic reticulum	31.05	35.17
PGSC0003DMT400023141	Potato	endoplasmic reticulum, plasma membrane	31.05	34.68
PGSC0003DMT400039270	Potato	cytosol, endoplasmic reticulum, plastid	17.87	33.9
PGSC0003DMT400052065	Potato	endoplasmic reticulum	30.87	32.88
PGSC0003DMT400050139	Potato	endoplasmic reticulum, plasma membrane	30.14	32.81

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102594638	MapMan:21.9.1.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0016705	GO:GO:0018685	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396
UniProt:M1AWA0	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400012202	PGSC:PGSC0003DMG400012202	EnsemblPlants:PGSC0003DMT400031804	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF35	SUPFAM:SSF48264	UniParc:UPI000296D028
RefSeq:XP_006343967.1	SEG:seg	:	:	:	:

Description

Cytochrome P450 fatty acid omega-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400012202]

Coordinates

chr8:-:54895155..54897745

Molecular Weight (calculated)

62664.3 Da

IEP (calculated)

8.206

GRAVY (calculated)

-0.093

Length

554 amino acids

Sequence
(BLAST)

001: MDLSTGMMIV AIVAAYLLWF KSITKSMKGP KGPKIWPIVG SLPGLLENGN RMHEWIAENL RVCTGTYQTC ICAIPFLARK QGLVTVTCDP KNLEHILKVR
101: FDNYPKGPTW QAVFHDLLGE GIFNSDGDTW LFQRKTAALE FTTRTLRQAM GRWVNRAIKN RFCPILEMAQ VQGKPVELQD LLLRLTFDNI CGLTFGKDPE
201: TLSPGLPENI FATSFDRATE ATLHRFIIPE FIWKLKKMLG LGVEVSLSRS LKQLDNYMTD IINTRKLELM NHQNGGPQHD DLLSRFMKKK ESYSDKFLQH
301: VALNFILAGR DTSSVALSWF FWLVSLNPRV EEKILVELCT VLVETRGNDT SKWLEEPLVF EEVDQLAYLK AALSETLRLY PSVPEDSKHV ISDDYLPDGT
401: FVPSGSNITY SIYSTGRMKF IWGEDCLEFK PERWMSEDGN KYQVQDAFRF VAFNAGPRIC LGKDLAYLQM KSIAAAVLLR HRLAVAPGHK VEQKMSLTLF
501: MKYGLVMNVT PRDLTPILAK IEKFCKIDHS CGGEHIINNG IHQTGAIAVN GIAA

Best Arabidopsis Sequence Match ( AT4G00360.1 )
(BLAST)

001: MDVSNTMLLV AVVAAYWLWF QRISRWLKGP RVWPVLGSLP GLIEQRDRMH DWITENLRAC GGTYQTCICA VPFLAKKQGL VTVTCDPKNI EHMLKTRFDN
101: YPKGPTWQAV FHDFLGQGIF NSDGDTWLFQ RKTAALEFTT RTLRQAMGRW VNRGIKLRFC PILETAQNNY EPVDLQDLIL RLTFDNICGL AFGKDTRTCA
201: PGLPENGFAS AFDRATEASL QRFILPEFLW RLKKWLGLGL EVSLSRSLGE IDGYLDAVIN TRKQELLSQR ESGVQRHDDL LSRFMKKKDQ SYSETFLRHV
301: ALNFILAGRD TSSVALSWFF WLITTHPTVE DKIVREICSV LIETRGTDVS SWTAEPLEFD EVDRLVYLKA ALSETLRLYP SVPEDSKHVV NDDILPDGTF
401: VPAGSSVTYS IYAAGRMKST WGEDCLEFKP ERWISPDDGK FVNHDQYRFV AFNAGPRICL GKDLAYLQMK TIAAAVLLRH RLTVAPGHKV EQKMSLTLFM
501: KNGLLVNVHK RDLEVMMKSL VPKERNDVVV LNGKCNGGIG EGVAVNAAVA VAV

Arabidopsis Description

CYP86A2Cytochrome P450 86A2 [Source:UniProtKB/Swiss-Prot;Acc:O23066]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.