Factsheet for VIT_02s0025g03320.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

cytosol 1
plastid 2
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59920	Soybean	endoplasmic reticulum, plasma membrane	77.49	79.55
KRH41201	Soybean	endoplasmic reticulum, plasma membrane	70.3	78.4
PGSC0003DMT400031804	Potato	endoplasmic reticulum, extracellular	78.78	77.08
Solyc08g081220.1.1	Tomato	endoplasmic reticulum, extracellular	78.41	76.71
VIT_15s0046g02380.t01	Wine grape	endoplasmic reticulum, golgi	78.97	75.62
AT1G63710.1	Thale cress	endoplasmic reticulum, golgi	71.59	74.19
GSMUA_Achr5P19450_001	Banana	endoplasmic reticulum	62.73	71.73
GSMUA_Achr5P12420_001	Banana	endoplasmic reticulum	61.44	70.7
TraesCS2A01G407500.1	Wheat	endoplasmic reticulum	69.0	70.7
TraesCS2D01G404600.1	Wheat	golgi	68.63	70.32
OQU85673	Sorghum	cytosol	64.02	70.24
TraesCS2B01G425400.1	Wheat	golgi	69.0	70.04
GSMUA_Achr4P26290_001	Banana	endoplasmic reticulum, extracellular	68.45	69.87
Zm00001d017528_P001	Maize	endoplasmic reticulum	68.63	69.66
Os02t0666500-01	Rice	endoplasmic reticulum	68.27	69.55
Os04t0560100-01	Rice	endoplasmic reticulum	69.19	68.81
TraesCS6D01G227200.1	Wheat	endoplasmic reticulum	68.45	68.58
EES12648	Sorghum	endoplasmic reticulum	67.9	68.4
TraesCS6B01G279400.1	Wheat	endoplasmic reticulum	68.27	68.39
Zm00001d002687_P001	Maize	endoplasmic reticulum	67.53	68.28
TraesCS6A01G244900.1	Wheat	endoplasmic reticulum, mitochondrion	68.27	68.27
HORVU6Hr1G064170.1	Barley	plasma membrane	68.27	67.89
VIT_06s0004g06210.t01	Wine grape	endoplasmic reticulum	63.47	66.28
VIT_01s0011g02060.t01	Wine grape	endoplasmic reticulum, golgi, plastid	43.73	43.49
VIT_03s0017g01070.t01	Wine grape	endoplasmic reticulum, golgi	39.11	42.57
VIT_08s0040g00820.t01	Wine grape	endoplasmic reticulum	38.01	41.2
VIT_13s0074g00790.t01	Wine grape	cytosol	34.87	40.3
VIT_06s0080g00090.t01	Wine grape	cytosol	32.84	40.0
VIT_07s0141g00920.t01	Wine grape	endoplasmic reticulum, plasma membrane	36.16	38.74
VIT_01s0137g00410.t01	Wine grape	endoplasmic reticulum, extracellular	39.48	38.21
VIT_07s0141g00890.t01	Wine grape	endoplasmic reticulum, plasma membrane	35.42	38.02
VIT_06s0009g03630.t01	Wine grape	endoplasmic reticulum, plasma membrane	35.98	36.93
VIT_17s0000g01490.t01	Wine grape	endoplasmic reticulum, golgi	31.73	33.59
VIT_08s0007g03660.t01	Wine grape	endoplasmic reticulum, plasma membrane	33.03	32.6
VIT_14s0068g02120.t01	Wine grape	endoplasmic reticulum, plastid	31.73	32.09

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100247907	wikigene:100247907	MapMan:21.9.1.1	EMBL:AM425970	ProteinID:CAN80040
ProteinID:CAN80040.1	ProteinID:CCB58340	ProteinID:CCB58340.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	UniProt:F6HUB7	EMBL:FN596251	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705
GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100247907	wikigene:LOC100247907
PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF35
SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI000210A18D	ArrayExpress:VIT_02s0025g03320	EnsemblPlantsGene:VIT_02s0025g03320	EnsemblPlants:VIT_02s0025g03320.t01
unigene:Vvi.12228	RefSeq:XP_002275806	RefSeq:XP_002275806.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:+:2829143..2833459

Molecular Weight (calculated)

61638.4 Da

IEP (calculated)

9.851

GRAVY (calculated)

-0.125

Length

542 amino acids

Sequence
(BLAST)

001: MDASTVLLLL AIITAYLIWF RSITRSLKGP RVWPVVGSLP LLIQNANRMH EWIAENLRSC GGTYQTCICP IPFLARKQGL VTVTCDPKNL EHILKIRFDN
101: YPKGPTWQAV FHDLLGEGIF NSDGETWRFQ RKTAALEFTT RTLRQAMARW VTRAIKLRFC PILKKAQLEG KPVDLQDLLL RLTFDNICGL AFGKDPQTLA
201: PGLPENSFAT AFDRATEATL QRFILPEFIW KLKKWLRLGM EASLTHSLGH VDKYLSDVIS TRKLELVSQQ QGGSPHDDLL SRFMKKKEAY SDNFLQHVAL
301: NFILAGRDTS SVALSWFFWL VIQNPRVEEK ILTEICTVLM ETRGSDTSKW VEDPLVFEEV DRLIYLKAAL SETLRLYPSV PEDSKHVVVD DVLPDGTFVP
401: AGSAITYSIY STGRMKFIWG EDCLEFRPER WLSADGKKIE LQDSFKFVAF NAGPRICLGK DLAYLQMKSI AAAVLLRHRL TVAPGHRVEQ KMSLTLFMKY
501: GLKVNVQPRD LTPILANIPK AKPNTKVNGA KRMKQKGKKM EY

Best Arabidopsis Sequence Match ( AT2G45970.1 )
(BLAST)

001: MEISTALMIL SAITAYFLWL TFISRCLKGP RVWPILGSLP GLIENCERMH DWISDNLRAC SGTYQTCICA IPFLAKKQGL VTVTCDPRNL EHILKNRFDN
101: YPKGPTWQAV FHDLLGQGIF NSDGDTWLFQ RKTAALEFTT RTLRQAMARW VNRAIKLRFL PILENARLGS EPIDLQDLLL RLTFDNICGL TFGKDPRTCA
201: PGLPVNTFAV AFDRATEASL QRFILPEILW KFKRWLRLGL EVSLTRSLVQ VDNYLSEIIT TRKEEMMTQH NNGKHHDDLL SRFIKKKESY SDETLQRVAL
301: NFILAGRDTS SVALSWFFWL ITQHPAIEDK ILREICTVLV ETRGDDVALW TDEPLSCEEL DRLVFLKAAL SETLRLYPSV PEDSKRAVKD DVLPDGTFVP
401: AGSSITYSIY SAGRMKSTWG EDCLEFKPER WISQSDGGRF INHDPFKFVA FNAGPRICLG KDLAYLQMKS IASAVLLRHR LTVVTGHKVE QKMSLTLFMK
501: YGLLVNVHER DLTAIAADLR ECKSNVVNDG VGNGVSS

Arabidopsis Description

CYP86A8Cytochrome P450 86A8 [Source:UniProtKB/Swiss-Prot;Acc:O80823]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.