Factsheet for VIT_01s0011g02060.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:

plastid 4
cytosol 1
endoplasmic reticulum 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P01940_001	Banana	cytosol	59.82	77.07
PGSC0003DMT400027430	Potato	endoplasmic reticulum, golgi	71.74	76.67
GSMUA_Achr2P11390_001	Banana	mitochondrion	59.45	73.3
KRH29137	Soybean	plastid	75.41	73.13
Solyc02g014730.2.1	Tomato	endoplasmic reticulum, golgi	74.68	73.07
CDY02213	Canola	plastid	72.84	71.4
CDY61911	Canola	plastid	72.84	71.4
Bra013024.1-P	Field mustard	plastid	72.66	71.22
GSMUA_Achr4P29440_001	Banana	cytosol	52.84	70.76
AT5G23190.1	Thale cress	endoplasmic reticulum	72.29	70.48
Bra029361.1-P	Field mustard	endoplasmic reticulum, plastid, vacuole	71.74	70.45
CDY46948	Canola	endoplasmic reticulum, golgi, plastid	71.19	69.91
AT5G08250.2	Thale cress	endoplasmic reticulum	69.17	68.55
CDY40805	Canola	endoplasmic reticulum, golgi, plastid	60.37	68.54
Zm00001d032651_P001	Maize	endoplasmic reticulum, peroxisome, plastid	67.71	68.33
KRG89124	Soybean	endoplasmic reticulum, golgi, plastid	68.44	68.19
KXG38289	Sorghum	plastid	68.44	68.07
Zm00001d013979_P001	Maize	plastid	67.34	67.46
KRH40879	Soybean	plastid	68.44	67.33
TraesCS1B01G177900.1	Wheat	peroxisome, plastid	66.79	66.18
TraesCS1A01G161400.1	Wheat	peroxisome	66.61	66.12
Os10t0486100-00	Rice	peroxisome	67.89	66.07
TraesCS1D01G158400.1	Wheat	peroxisome, plastid	66.24	65.76
TraesCS7D01G520200.1	Wheat	plastid	66.42	63.84
HORVU1Hr1G042810.1	Barley	mitochondrion	66.42	60.23
VIT_03s0017g01070.t01	Wine grape	endoplasmic reticulum, golgi	45.32	49.6
GSMUA_Achr4P25410_001	Banana	mitochondrion	53.58	47.48
VIT_01s0137g00410.t01	Wine grape	endoplasmic reticulum, extracellular	47.71	46.43
VIT_02s0025g03320.t01	Wine grape	endoplasmic reticulum, golgi	43.49	43.73
VIT_06s0004g06210.t01	Wine grape	endoplasmic reticulum	40.73	42.77
VIT_08s0040g00820.t01	Wine grape	endoplasmic reticulum	37.98	41.4
VIT_06s0080g00090.t01	Wine grape	cytosol	33.21	40.67
VIT_15s0046g02380.t01	Wine grape	endoplasmic reticulum, golgi	42.2	40.64
VIT_13s0074g00790.t01	Wine grape	cytosol	33.39	38.81
VIT_07s0141g00890.t01	Wine grape	endoplasmic reticulum, plasma membrane	35.6	38.42
VIT_07s0141g00920.t01	Wine grape	endoplasmic reticulum, plasma membrane	35.41	38.14
VIT_17s0000g01490.t01	Wine grape	endoplasmic reticulum, golgi	34.31	36.52
VIT_06s0009g03630.t01	Wine grape	endoplasmic reticulum, plasma membrane	33.95	35.04
VIT_08s0007g03660.t01	Wine grape	endoplasmic reticulum, plasma membrane	33.76	33.52
VIT_14s0068g02120.t01	Wine grape	endoplasmic reticulum, plastid	32.48	33.02

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100254406	wikigene:100254406	MapMan:21.9.1.3	EMBL:AM486428	ProteinID:CAN75428
ProteinID:CAN75428.1	ProteinID:CCB50993	ProteinID:CCB50993.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	UniProt:F6HF53	EMBL:FN595752	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	EntrezGene:LOC100254406	wikigene:LOC100254406	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF3	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI00015C7813
ArrayExpress:VIT_01s0011g02060	EnsemblPlantsGene:VIT_01s0011g02060	EnsemblPlants:VIT_01s0011g02060.t01	unigene:Vvi.4078	RefSeq:XP_002277006	RefSeq:XP_002277006.1

Description

No Description!

Coordinates

chr1:+:1748090..1751431

Molecular Weight (calculated)

62415.2 Da

IEP (calculated)

9.258

GRAVY (calculated)

-0.129

Length

545 amino acids

Sequence
(BLAST)

001: MINPSSNFTP LPSHGIARNF VSRRLLFLPE IQVMEVLVAL IVFVAIHSLR QRKRHGLPVW PFLGMLPSLV GGLRTDMYEW ISGVLCRRNG TFVFKGPWFS
101: SLNCVVTSDP RNIEHLLKGK FSNFPKGAYF RNTVRDLLGD GIFSADDETW QRQRKTASIE FHSAKFRKLT IESLLVLVHS RLLPVLEDSV KNSASIDLQD
201: VLLRLTFDNV CMIAFGVDPG CLRLGLPEIP FARAFEDATE ATVLRFVTPT CIWKAMRHLN IGTEKNLKIS IMGVDKFANE VITTRKKELS LQCDDKNQRS
301: DLLSIFMGLK DENGQPFSDK FLRDICVNFI LAGRDTSSVA LSWFFWLLDR NPAVEERIMA EICRMVGERK GEEEGDGLIF KAEEVKKMEY LQAALSEALR
401: LYPSVPVDHK EVIEDDVFPD GTVLKKGTKV VYAIYAMGRM EGIWGKDCRE FKPERWLRDG RFMSESAYKF TAFNGGPRLC LGKDFAYYQM KFAAASIIYR
501: YHVKVVENHP VEPKLALTMY MKHGLKVNLI RRHESELQKY LKIRN

Best Arabidopsis Sequence Match ( AT5G23190.1 )
(BLAST)

001: MNFNSSYNLT FNDVFFSSSS SSDPLVSRRL FLLRDVQILE LLIAIFVFVA IHALRQKKYQ GLPVWPFLGM LPSLAFGLRG NIYEWLSDVL CLQNGTFQFR
101: GPWFSSLNST ITCDPRNVEH LLKNRFSVFP KGSYFRDNLR DLLGDGIFNA DDETWQRQRK TASIEFHSAK FRQLTTQSLF ELVHKRLLPV LETSVKSSSP
201: IDLQDVLLRL TFDNVCMIAF GVDPGCLGPD QPVIPFAKAF EDATEAAVVR FVMPTCVWKF MRYLDIGTEK KLKESIKGVD DFADEVIRTR KKELSLEGET
301: TKRSDLLTVF MGLRDEKGES FSDKFLRDIC VNFILAGRDT SSVALSWFFW LLEKNPEVEE KIMVEMCKIL RQRDDHGNAE KSDYEPVFGP EEIKKMDYLQ
401: AALSEALRLY PSVPVDHKEV QEDDVFPDGT MLKKGDKVIY AIYAMGRMEA IWGKDCLEFR PERWLRDGRF MSESAYKFTA FNGGPRLCLG KDFAYYQMKS
501: TAAAIVYRYK VKVVNGHKVE PKLALTMYMK HGLMVNLINR SVSEIDQYYA KSFDEGYIN

Arabidopsis Description

CYP86B1Cytochrome P450 86B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMY1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.