Factsheet for TraesCS1D01G158400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 3
peroxisome 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G177900.1	Wheat	peroxisome, plastid	98.36	98.18
TraesCS1A01G161400.1	Wheat	peroxisome	97.27	97.27
TraesCS7D01G520200.1	Wheat	plastid	99.45	96.3
HORVU1Hr1G042810.1	Barley	mitochondrion	96.17	87.85
Zm00001d032651_P001	Maize	endoplasmic reticulum, peroxisome, plastid	83.61	85.0
Zm00001d013979_P001	Maize	plastid	84.15	84.93
KXG38289	Sorghum	plastid	84.15	84.31
Os10t0486100-00	Rice	peroxisome	82.88	81.25
GSMUA_Achr1P01940_001	Banana	cytosol	60.84	78.96
GSMUA_Achr2P11390_001	Banana	mitochondrion	61.02	75.79
GSMUA_Achr4P29440_001	Banana	cytosol	53.92	72.73
PGSC0003DMT400027430	Potato	endoplasmic reticulum, golgi	62.66	67.45
VIT_01s0011g02060.t01	Wine grape	endoplasmic reticulum, golgi, plastid	65.76	66.24
Solyc02g014730.2.1	Tomato	endoplasmic reticulum, golgi	64.48	63.55
KRH29137	Soybean	plastid	63.21	61.74
Bra029361.1-P	Field mustard	endoplasmic reticulum, plastid, vacuole	61.38	60.72
AT5G23190.1	Thale cress	endoplasmic reticulum	61.38	60.29
CDY02213	Canola	plastid	61.02	60.25
AT5G08250.2	Thale cress	endoplasmic reticulum	60.29	60.18
CDY46948	Canola	endoplasmic reticulum, golgi, plastid	60.84	60.18
KRG89124	Soybean	endoplasmic reticulum, golgi, plastid	59.93	60.15
Bra013024.1-P	Field mustard	plastid	60.84	60.07
CDY61911	Canola	plastid	60.84	60.07
KRH40879	Soybean	plastid	60.29	59.75
CDY40805	Canola	endoplasmic reticulum, golgi, plastid	51.0	58.33
GSMUA_Achr4P25410_001	Banana	mitochondrion	53.37	47.64
TraesCS2D01G404600.1	Wheat	golgi	45.17	46.88
TraesCS6D01G227200.1	Wheat	endoplasmic reticulum	45.72	46.4
TraesCS6D01G193600.1	Wheat	golgi	43.17	45.93
TraesCS3D01G361200.1	Wheat	plastid	44.26	44.83
TraesCS2D01G535800.1	Wheat	mitochondrion	30.05	40.34
TraesCS3D01G325500.1	Wheat	endoplasmic reticulum	36.25	38.79
TraesCS4D01G240900.1	Wheat	endoplasmic reticulum	36.79	38.55
TraesCS2D01G589200.1	Wheat	endoplasmic reticulum	36.43	38.46
TraesCS5D01G006800.1	Wheat	endoplasmic reticulum, golgi	35.34	38.19
TraesCS4D01G240800.1	Wheat	endoplasmic reticulum, golgi	36.43	37.88
TraesCS5D01G154600.1	Wheat	endoplasmic reticulum	34.97	37.65
TraesCS2D01G007600.1	Wheat	mitochondrion	35.52	37.57
TraesCS3D01G325600.1	Wheat	endoplasmic reticulum	36.43	37.31
TraesCS1D01G359100.1	Wheat	endoplasmic reticulum	36.07	37.29
TraesCS3D01G325700.1	Wheat	endoplasmic reticulum	36.25	36.72
TraesCS5D01G137000.1	Wheat	endoplasmic reticulum, vacuole	33.33	36.02
TraesCS2D01G535700.1	Wheat	extracellular, plasma membrane	32.79	35.71
TraesCS1D01G276600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	33.15	34.6
TraesCS5D01G410100.1	Wheat	endoplasmic reticulum, plasma membrane	35.15	34.46
TraesCS3D01G364300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	33.33	34.4
TraesCS1D01G239600.1	Wheat	endoplasmic reticulum	32.79	34.03

Protein Annotations

Gene3D:1.10.630.10	MapMan:21.9.1.3	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24296	PANTHER:PTHR24296:SF3	SUPFAM:SSF48264	EnsemblPlantsGene:TraesCS1D01G158400
EnsemblPlants:TraesCS1D01G158400.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:223171451..223173958

Molecular Weight (calculated)

60868.8 Da

IEP (calculated)

8.210

GRAVY (calculated)

-0.001

Length

549 amino acids

Sequence
(BLAST)

001: MGAMDALISS GAHNATTATF IGAGGLASLL PQVQTVEVLV AVSIFVAIHS LRQRRSLGLP SWPVVGMLPS LLLGVRGDMY EWITGVLKAR GGTFTFCGPW
101: FTNLHCVVTA DPRNLEHLLK TKFGNFPKGP YFRDTVRDLL GDGIFGADDE VWRQQRKAAS LEFHSAEFRA LTASSLVELV HRRLLPVLAE TEAAGAAVDL
201: QDVLLRLTFD NVCMIAFGAD PGCLQKGLPE IPFARAFEDA TEATIVRFVT PTAVWRGMRA LGVGHERVLR RSLAGVDEFA YDVIRKRREE LAAAAATGHE
301: EAAGGLRRAD LLTIFTKMRG ADGAPAYSDK FLRDICVNFI LAGRDTSSVA LAWFFWLLSK NRGVEAKILQ EVEGIVAARG RCGEVEEELV FQPEEVKRME
401: YLHAALSEAL RLYPSVPVDH KEVVEDEVFP DGTVLKKGTK VIYAMYSMGR MESIWGEDCR EYRPERWLKD DRFMGESAYK FTAFNGGPRL CLGKDFAYYQ
501: MKFAAASILR RYRVDVVQGH PVAPKLALTL FMKHGLKVTL AKRDDKAKL

Best Arabidopsis Sequence Match ( AT5G23190.1 )
(BLAST)

001: MNFNSSYNLT FNDVFFSSSS SSDPLVSRRL FLLRDVQILE LLIAIFVFVA IHALRQKKYQ GLPVWPFLGM LPSLAFGLRG NIYEWLSDVL CLQNGTFQFR
101: GPWFSSLNST ITCDPRNVEH LLKNRFSVFP KGSYFRDNLR DLLGDGIFNA DDETWQRQRK TASIEFHSAK FRQLTTQSLF ELVHKRLLPV LETSVKSSSP
201: IDLQDVLLRL TFDNVCMIAF GVDPGCLGPD QPVIPFAKAF EDATEAAVVR FVMPTCVWKF MRYLDIGTEK KLKESIKGVD DFADEVIRTR KKELSLEGET
301: TKRSDLLTVF MGLRDEKGES FSDKFLRDIC VNFILAGRDT SSVALSWFFW LLEKNPEVEE KIMVEMCKIL RQRDDHGNAE KSDYEPVFGP EEIKKMDYLQ
401: AALSEALRLY PSVPVDHKEV QEDDVFPDGT MLKKGDKVIY AIYAMGRMEA IWGKDCLEFR PERWLRDGRF MSESAYKFTA FNGGPRLCLG KDFAYYQMKS
501: TAAAIVYRYK VKVVNGHKVE PKLALTMYMK HGLMVNLINR SVSEIDQYYA KSFDEGYIN

Arabidopsis Description

CYP86B1Cytochrome P450 86B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMY1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.