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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • mitochondrion 6
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:endoplasmic reticulum, mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:endoplasmic reticulum
golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G053810.2 Barley endoplasmic reticulum 96.12 94.3
TraesCS6B01G239400.1 Wheat mitochondrion 97.29 91.27
TraesCS6A01G210500.1 Wheat mitochondrion 88.95 88.95
Zm00001d050977_P001 Maize mitochondrion 77.13 74.53
Os02t0596300-01 Rice cytosol, peroxisome 70.16 74.49
EES07097 Sorghum golgi 76.94 74.07
VIT_03s0017g01070.t01 Wine grape endoplasmic reticulum, golgi 50.0 51.81
CDX84956 Canola endoplasmic reticulum 50.58 51.79
AT1G24540.1 Thale cress endoplasmic reticulum, golgi 52.33 51.72
Bra032794.1-P Field mustard cytosol 46.71 51.39
GSMUA_Achr10P... Banana golgi, mitochondrion 50.58 51.38
CDY27586 Canola endoplasmic reticulum 50.0 50.79
VIT_01s0137g00410.t01 Wine grape endoplasmic reticulum, extracellular 54.84 50.54
CDY19394 Canola endoplasmic reticulum, golgi 47.09 46.11
Bra019812.1-P Field mustard endoplasmic reticulum 47.09 46.11
CDX98008 Canola endoplasmic reticulum 47.09 45.51
CDY21086 Canola endoplasmic reticulum, golgi 36.63 45.43
Bra016739.1-P Field mustard cytosol, endoplasmic reticulum, nucleus 42.44 44.97
AT1G13140.1 Thale cress endoplasmic reticulum 46.12 44.57
CDY34587 Canola endoplasmic reticulum, golgi, plasma membrane 43.99 44.08
AT3G26125.1 Thale cress endoplasmic reticulum 45.93 43.81
AT1G13150.1 Thale cress endoplasmic reticulum 44.57 43.48
TraesCS1D01G158400.1 Wheat peroxisome, plastid 45.93 43.17
Bra017333.1-P Field mustard endoplasmic reticulum 44.57 42.91
CDY04194 Canola endoplasmic reticulum 44.57 42.91
CDY39170 Canola endoplasmic reticulum 44.57 42.91
TraesCS7D01G520200.1 Wheat plastid 46.12 41.98
TraesCS4D01G240800.1 Wheat endoplasmic reticulum, golgi 41.86 40.91
TraesCS2D01G589200.1 Wheat endoplasmic reticulum 40.7 40.38
TraesCS2D01G404600.1 Wheat golgi 41.28 40.26
TraesCS5D01G154600.1 Wheat endoplasmic reticulum 39.73 40.2
TraesCS5D01G006800.1 Wheat endoplasmic reticulum, golgi 39.53 40.16
TraesCS6D01G227200.1 Wheat endoplasmic reticulum 41.86 39.93
TraesCS4D01G240900.1 Wheat endoplasmic reticulum 40.5 39.89
TraesCS2D01G535800.1 Wheat mitochondrion 31.2 39.36
TraesCS3D01G325500.1 Wheat endoplasmic reticulum 37.79 38.01
TraesCS3D01G325600.1 Wheat endoplasmic reticulum 39.15 37.69
TraesCS3D01G364300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 38.57 37.41
TraesCS2D01G007600.1 Wheat mitochondrion 37.6 37.38
TraesCS3D01G361200.1 Wheat plastid 38.57 36.72
TraesCS5D01G137000.1 Wheat endoplasmic reticulum, vacuole 36.05 36.61
TraesCS3D01G325700.1 Wheat endoplasmic reticulum 38.37 36.53
TraesCS2D01G535700.1 Wheat extracellular, plasma membrane 35.47 36.31
TraesCS1D01G359100.1 Wheat endoplasmic reticulum 37.21 36.16
TraesCS1D01G276600.1 Wheat endoplasmic reticulum, plasma membrane, plastid 36.82 36.12
TraesCS1D01G239600.1 Wheat endoplasmic reticulum 36.82 35.92
TraesCS5D01G410100.1 Wheat endoplasmic reticulum, plasma membrane 38.18 35.18
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152
GO:GO:0016705GO:GO:0020037GO:GO:0055114InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PFscan:PS51257PANTHER:PTHR24296PANTHER:PTHR24296:SF2SUPFAM:SSF48264
EnsemblPlantsGene:TraesCS6D01G193600EnsemblPlants:TraesCS6D01G193600.1SEG:seg:::
Description
No Description!
Coordinates
chr6D:-:267728111..267729775
Molecular Weight (calculated)
57011.4 Da
IEP (calculated)
8.465
GRAVY (calculated)
-0.071
Length
516 amino acids
Sequence
(BLAST)
001: MAGRAFVNAA VRAMQEYVRA SDLALAAAVL FACNAATTRL KSRGGPMLWP VFGIIPTLFA HLDNIYDWGA AALARSGGTF PYRGMWGGGS SGVITSVPAN
101: VEHVLKTNFS NYPKGPYYRE RFVELLGDGI FNADGEAWRA QRRAATAEMH SAQFLEFSAR TIEQLVHGRL IPLLQQQQSQ GGVTVDLQEV LLRFTFDNIC
201: AAAFGVDAGC LADGLPDVPF ARAFERATEL SLARFVTPPF VWKAKRLLCV GGERRLAEAA RSVREFAERT VSERRTELRK LGSLQGRCDL LSRLMSSSTG
301: HSDEFLRDFC ISFILAGRDT SSVALVWFFW LLASHPDAEA RVLDDVRAAH GDVGKMDYLH AALTESMRLY PPVPVDFKEA LQDDVLPDGT AIRARQRVIY
401: NTYAIGRDPA AWGEDCLEFR PERWMKGGDF AGGAESPFKY VVFNAGPRLC VGKRFAYTQM KTLAAAVLET FAVEVAPGQA VKPKLNTTLY MKNGLMVSFR
501: RREQQHVHCT TVAAQE
Best Arabidopsis Sequence Match ( AT1G24540.1 )
(BLAST)
001: MNVLISAVVW VYTHLRLSDV ALALVGLFLL SYLREKLVSK GGPVMWPVLG IIPMLALNKH DLFTWCTRCV VRSGGTFHYR GIWFGGAYGI MTADPANVEH
101: ILKTNFKNYP KGAFYRERFR DLLEDGIFNA DDELWKEERR VAKTEMHSSR FLEHTFTTMR DLVDQKLVPL MENLSTSKRV FDLQDLLLRF TFDNICISAF
201: GVYPGSLETG LPEIPFAKAF EDATEYTLAR FLIPPFVWKP MRFLGIGYER KLNNAVRIVH AFANKTVRER RNKMRKLGNL NDYADLLSRL MQREYEKEED
301: TTRGNYFSDK YFREFCTSFI IAGRDTTSVA LVWFFWLVQK HPEVEKRILR EIREIKRKLT TQETEDQFEA EDFREMVYLQ AALTESLRLY PSVPMEMKQA
401: LEDDVLPDGT RVKKGARIHY SVYSMGRIES IWGKDWEEFK PERWIKEGRI VSEDQFKYVV FNGGPRLCVG KKFAYTQMKM VAAAILMRYS VKVVQGQEIV
501: PKLTTTLYMK NGMNVMLQPR DW
Arabidopsis Description
CYP86C1Cytochrome P450, family 86, subfamily C, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9FYL0]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.