Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 4
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19394 | Canola | endoplasmic reticulum, golgi | 86.7 | 87.86 |
| Bra019812.1-P | Field mustard | endoplasmic reticulum | 86.14 | 87.29 |
| CDX98008 | Canola | endoplasmic reticulum | 86.7 | 86.7 |
| AT1G13150.1 | Thale cress | endoplasmic reticulum | 82.02 | 82.8 |
| AT3G26125.1 | Thale cress | endoplasmic reticulum | 76.59 | 75.6 |
| AT1G24540.1 | Thale cress | endoplasmic reticulum, golgi | 55.06 | 56.32 |
| VIT_03s0017g01070.t01 | Wine grape | endoplasmic reticulum, golgi | 52.43 | 56.22 |
| VIT_01s0137g00410.t01 | Wine grape | endoplasmic reticulum, extracellular | 55.06 | 52.5 |
| GSMUA_Achr10P... | Banana | golgi, mitochondrion | 44.76 | 47.05 |
| TraesCS6D01G193600.1 | Wheat | golgi | 44.57 | 46.12 |
| EES07097 | Sorghum | golgi | 46.07 | 45.9 |
| Os02t0596300-01 | Rice | cytosol, peroxisome | 41.57 | 45.68 |
| Zm00001d050977_P001 | Maize | mitochondrion | 45.13 | 45.13 |
| HORVU6Hr1G053810.2 | Barley | endoplasmic reticulum | 44.01 | 44.68 |
| TraesCS6B01G239400.1 | Wheat | mitochondrion | 44.57 | 43.27 |
| TraesCS6A01G210500.1 | Wheat | mitochondrion | 41.2 | 42.64 |
| AT5G23190.1 | Thale cress | endoplasmic reticulum | 42.32 | 40.43 |
| AT5G08250.2 | Thale cress | endoplasmic reticulum | 41.01 | 39.82 |
| AT1G63710.1 | Thale cress | endoplasmic reticulum, golgi | 37.45 | 38.24 |
| AT4G00360.1 | Thale cress | endoplasmic reticulum | 39.14 | 37.79 |
| AT1G01600.1 | Thale cress | endoplasmic reticulum | 38.58 | 37.18 |
| AT3G56630.1 | Thale cress | endoplasmic reticulum | 34.64 | 37.07 |
| AT5G58860.1 | Thale cress | endoplasmic reticulum | 35.58 | 37.04 |
| AT2G45970.1 | Thale cress | endoplasmic reticulum, golgi | 37.08 | 36.87 |
| AT3G48520.1 | Thale cress | endoplasmic reticulum | 34.27 | 36.17 |
| AT1G34540.1 | Thale cress | endoplasmic reticulum | 33.52 | 35.94 |
| AT3G01900.1 | Thale cress | endoplasmic reticulum | 33.33 | 35.89 |
| AT2G27690.1 | Thale cress | endoplasmic reticulum | 30.9 | 33.33 |
| AT5G63450.2 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 33.15 | 31.16 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EntrezGene:837871 | UniProt:A0A178W5A9 | ProteinID:AEE28974.1 | ArrayExpress:AT1G13140 |
| EnsemblPlantsGene:AT1G13140 | RefSeq:AT1G13140 | TAIR:AT1G13140 | RefSeq:AT1G13140-TAIR-G | EnsemblPlants:AT1G13140.1 | TAIR:AT1G13140.1 |
| Unigene:At.42045 | EMBL:BT022111 | Symbol:CYP86C3 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I |
| InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0046872 |
| GO:GO:0055114 | InterPro:IPR036396 | RefSeq:NP_172773.4 | ProteinID:OAP13458.1 | PFAM:PF00067 | PO:PO:0000013 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 |
| PRINTS:PR00385 | PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24296 | PANTHER:PTHR24296:SF2 | UniProt:Q500V6 |
| SUPFAM:SSF48264 | UniParc:UPI000050D3A8 | : | : | : | : |
Description
CYP86C3At1g13140 [Source:UniProtKB/TrEMBL;Acc:Q500V6]
Coordinates
chr1:-:4478384..4480325
Molecular Weight (calculated)
61500.4 Da
IEP (calculated)
7.878
GRAVY (calculated)
-0.166
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEISSSMPL TERVYNHLCL SDVSLALLGL FVFCCVREKV TKKLGPTIWP VFGITPEFFF HRNDVYGWAT RCLKKCRGTF LYNGIWLGGS YGAVTCVPAN
101: VEYMLKTNFK NFPKGAFFKE RFNDLLEDGI FNADAESWKE QRRIIITEMH STRFVEHSFQ TTQDLVRKKL LKVMESFARS QEAFDLQDVL LRLTFDNICI
201: AGLGDDPGTL DSDLPLVPFA QAFEEATEST MFRFMIPPFI WKPLKFFDIG YEKGLRKAVD VVHEFVDKMV VDRICKLKEE GTLGNRSDVL SRIIEIESHK
301: TTDEKDPSTI KFFRQFCTSF ILAGRDTSSV ALTWFFWVIQ KHPEVENKII REISEILRQR GDSPTSKNES LFTVKELNDM VYLQAALSET MRLYPPIPME
401: MKQAIEDDVF PDGTFIRKGS RVYFATYAMG RMESIWGKDC ESFKPERWIQ SGNFVNDDQF KYVVFNAGPR LCLGKTFAYL QMKTIAASVL SRYSIKVAKD
501: HVVVPRVTTT LYMRHGLKVT ISSKSLEEKI HVQD
101: VEYMLKTNFK NFPKGAFFKE RFNDLLEDGI FNADAESWKE QRRIIITEMH STRFVEHSFQ TTQDLVRKKL LKVMESFARS QEAFDLQDVL LRLTFDNICI
201: AGLGDDPGTL DSDLPLVPFA QAFEEATEST MFRFMIPPFI WKPLKFFDIG YEKGLRKAVD VVHEFVDKMV VDRICKLKEE GTLGNRSDVL SRIIEIESHK
301: TTDEKDPSTI KFFRQFCTSF ILAGRDTSSV ALTWFFWVIQ KHPEVENKII REISEILRQR GDSPTSKNES LFTVKELNDM VYLQAALSET MRLYPPIPME
401: MKQAIEDDVF PDGTFIRKGS RVYFATYAMG RMESIWGKDC ESFKPERWIQ SGNFVNDDQF KYVVFNAGPR LCLGKTFAYL QMKTIAASVL SRYSIKVAKD
501: HVVVPRVTTT LYMRHGLKVT ISSKSLEEKI HVQD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.