Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 5
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39170 | Canola | endoplasmic reticulum | 87.06 | 87.87 |
| Bra017333.1-P | Field mustard | endoplasmic reticulum | 87.06 | 87.87 |
| CDY04194 | Canola | endoplasmic reticulum | 86.88 | 87.69 |
| AT1G13140.1 | Thale cress | endoplasmic reticulum | 75.6 | 76.59 |
| AT1G13150.1 | Thale cress | endoplasmic reticulum | 73.01 | 74.67 |
| AT1G24540.1 | Thale cress | endoplasmic reticulum, golgi | 58.6 | 60.73 |
| VIT_03s0017g01070.t01 | Wine grape | endoplasmic reticulum, golgi | 52.68 | 57.23 |
| VIT_01s0137g00410.t01 | Wine grape | endoplasmic reticulum, extracellular | 56.75 | 54.82 |
| GSMUA_Achr10P... | Banana | golgi, mitochondrion | 44.73 | 47.64 |
| TraesCS6D01G193600.1 | Wheat | golgi | 43.81 | 45.93 |
| Zm00001d050977_P001 | Maize | mitochondrion | 44.55 | 45.13 |
| HORVU6Hr1G053810.2 | Barley | endoplasmic reticulum | 43.62 | 44.87 |
| EES07097 | Sorghum | golgi | 44.18 | 44.59 |
| Os02t0596300-01 | Rice | cytosol, peroxisome | 39.74 | 44.24 |
| TraesCS6B01G239400.1 | Wheat | mitochondrion | 43.62 | 42.91 |
| TraesCS6A01G210500.1 | Wheat | mitochondrion | 40.85 | 42.83 |
| AT5G08250.2 | Thale cress | endoplasmic reticulum | 42.7 | 42.0 |
| AT5G23190.1 | Thale cress | endoplasmic reticulum | 43.07 | 41.68 |
| AT1G63710.1 | Thale cress | endoplasmic reticulum, golgi | 36.97 | 38.24 |
| AT5G58860.1 | Thale cress | endoplasmic reticulum | 35.3 | 37.23 |
| AT3G56630.1 | Thale cress | endoplasmic reticulum | 33.64 | 36.47 |
| AT4G00360.1 | Thale cress | endoplasmic reticulum | 37.15 | 36.35 |
| AT1G34540.1 | Thale cress | endoplasmic reticulum | 33.46 | 36.35 |
| AT2G45970.1 | Thale cress | endoplasmic reticulum, golgi | 36.04 | 36.31 |
| AT1G01600.1 | Thale cress | endoplasmic reticulum | 36.41 | 35.56 |
| AT3G01900.1 | Thale cress | endoplasmic reticulum | 31.98 | 34.88 |
| AT3G48520.1 | Thale cress | endoplasmic reticulum | 31.98 | 34.19 |
| AT2G27690.1 | Thale cress | endoplasmic reticulum | 30.31 | 33.13 |
| AT5G63450.2 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 33.09 | 31.51 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EntrezGene:822212 | ProteinID:AEE77123.1 | ArrayExpress:AT3G26125 | EnsemblPlantsGene:AT3G26125 |
| RefSeq:AT3G26125 | TAIR:AT3G26125 | RefSeq:AT3G26125-TAIR-G | EnsemblPlants:AT3G26125.1 | TAIR:AT3G26125.1 | Unigene:At.43125 |
| ProteinID:BAB02431.1 | Symbol:CYP86C2 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0046872 | GO:GO:0055114 |
| InterPro:IPR036396 | RefSeq:NP_189243.1 | PFAM:PF00067 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0001054 |
| PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00385 | PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24296 | PANTHER:PTHR24296:SF2 | UniProt:Q9LTN1 |
| SUPFAM:SSF48264 | UniParc:UPI00000A361E | SEG:seg | : | : | : |
Description
CYP86C2Cytochrome P-450-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LTN1]
Coordinates
chr3:+:9551812..9553602
Molecular Weight (calculated)
62805.7 Da
IEP (calculated)
6.842
GRAVY (calculated)
-0.296
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNENSVMSL IDRISGHLCL QDVSIALLGL FLFGCLQAKL TNKGEPVQWP VFGITPEFFL HVHDMFGWVT RCLTKSRGTF PYQGIWFSGS YGAMTSVPAN
101: IEYMLKTNFK NFPKGEFYKE RFRDLLEDGI FNADDESWKE QRRIIITEMH STRFVDHSFQ TTRDLIERKL LKVMESFSKS QEAFDLQEIL LRLTFDNICI
201: AGLGDDPGTL DDDLPHVPFA KAFEEATEST LFRFMIPPFV WKPMKFFDIG YEKGLREAVE TVHNFIDKMV VERIAMLKDQ GTLANSKSDV LSRLIQIESH
301: KRGDENDRFT AKFFRQFCTS FILAGRDTSS VALTWFFWLI TKHPEVETKI LHEIREILNQ REKNKYKLDE TGEKESSRHF TVKELNDMVY LQAALSESLR
401: LYPPIPMEMK QATEEDVFPD GTFLRKGSRV YFSVYAMGRM ESIWGKDCEM FKPERWIQGG QYVSDDQFKY VVFNAGPRLC LGKTFAYLQM KMVAASILLN
501: YSIKVDQDHV VVPRVTTTLY MKHGLKVRIT PRSLEEKKQD S
101: IEYMLKTNFK NFPKGEFYKE RFRDLLEDGI FNADDESWKE QRRIIITEMH STRFVDHSFQ TTRDLIERKL LKVMESFSKS QEAFDLQEIL LRLTFDNICI
201: AGLGDDPGTL DDDLPHVPFA KAFEEATEST LFRFMIPPFV WKPMKFFDIG YEKGLREAVE TVHNFIDKMV VERIAMLKDQ GTLANSKSDV LSRLIQIESH
301: KRGDENDRFT AKFFRQFCTS FILAGRDTSS VALTWFFWLI TKHPEVETKI LHEIREILNQ REKNKYKLDE TGEKESSRHF TVKELNDMVY LQAALSESLR
401: LYPPIPMEMK QATEEDVFPD GTFLRKGSRV YFSVYAMGRM ESIWGKDCEM FKPERWIQGG QYVSDDQFKY VVFNAGPRLC LGKTFAYLQM KMVAASILLN
501: YSIKVDQDHV VVPRVTTTLY MKHGLKVRIT PRSLEEKKQD S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.